RNA–Protein interactions for RNA: ENST00000498212.1

HMGXB4-207, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-207ENST00000498212 TECPR2O15040 1411 aa12.48□□□□□ -0.41
HMGXB4-207ENST00000498212 RNF216Q9NWF9 866 aaPredicted RBP12.48□□□□□ -0.41
HMGXB4-207ENST00000498212 LRPPRCP42704 1394 aaKnown RBP12.47□□□□□ -0.41
HMGXB4-207ENST00000498212 SPATA31A6Q5VVP1 1343 aa12.47□□□□□ -0.41
HMGXB4-207ENST00000498212 RGS17Q9UGC6 210 aaPredicted RBP12.47□□□□□ -0.41
HMGXB4-207ENST00000498212 TMEM132EQ6IEE7 984 aa12.46□□□□□ -0.41
HMGXB4-207ENST00000498212 STK26Q9P289 416 aa12.46□□□□□ -0.41
HMGXB4-207ENST00000498212 LRP6O75581 1613 aa12.46□□□□□ -0.41
HMGXB4-207ENST00000498212 YTHDC2Q9H6S0 1430 aaKnown RBP12.45□□□□□ -0.42
HMGXB4-207ENST00000498212 ABCC11Q96J66 1382 aa12.45□□□□□ -0.42
HMGXB4-207ENST00000498212 RGPD8O14715 1765 aaPredicted RBP12.45□□□□□ -0.42
HMGXB4-207ENST00000498212 FMN2Q9NZ56 1722 aa12.45□□□□□ -0.42
HMGXB4-207ENST00000498212 C14orf93Q9H972 538 aaKnown RBP12.44□□□□□ -0.42
HMGXB4-207ENST00000498212 WAPLQ7Z5K2 1190 aa12.43□□□□□ -0.42
HMGXB4-207ENST00000498212 DDX17Q92841 729 aaKnown RBP12.43□□□□□ -0.42
HMGXB4-207ENST00000498212 LRRC59Q96AG4 307 aaKnown RBP12.43□□□□□ -0.42
HMGXB4-207ENST00000498212 DHX57Q6P158 1386 aaKnown RBP12.43□□□□□ -0.42
HMGXB4-207ENST00000498212 CFAP70Q5T0N1 1121 aa12.42□□□□□ -0.42
HMGXB4-207ENST00000498212 MEX3CQ5U5Q3 659 aaKnown RBP12.42□□□□□ -0.42
HMGXB4-207ENST00000498212 ORAI2Q96SN7 254 aa12.42□□□□□ -0.42
HMGXB4-207ENST00000498212 PLEKHH1Q9ULM0 1364 aa12.42□□□□□ -0.42
HMGXB4-207ENST00000498212 POTEAQ6S8J7 498 aa12.41□□□□□ -0.42
HMGXB4-207ENST00000498212 KIF1AQ12756 1690 aa12.41□□□□□ -0.42
HMGXB4-207ENST00000498212 ADGRB1O14514 1584 aa12.4□□□□□ -0.42
HMGXB4-207ENST00000498212 DCAF11Q8TEB1 546 aa12.4□□□□□ -0.42
HMGXB4-207ENST00000498212 SIRT1Q96EB6 747 aa12.4□□□□□ -0.42
HMGXB4-207ENST00000498212 KDM2AQ9Y2K7 1162 aa12.4□□□□□ -0.42
HMGXB4-207ENST00000498212 DLC1Q96QB1 1528 aa12.4□□□□□ -0.42
HMGXB4-207ENST00000498212 PNPLA6Q8IY17 1366 aa12.4□□□□□ -0.42
HMGXB4-207ENST00000498212 NUTM2BA6NNL0 878 aaPredicted RBP12.39□□□□□ -0.43
HMGXB4-207ENST00000498212 NUTM2EB1AL46 878 aaPredicted RBP12.39□□□□□ -0.43
HMGXB4-207ENST00000498212 ESCO1Q5FWF5 840 aa12.39□□□□□ -0.43
HMGXB4-207ENST00000498212 NUTM2AQ8IVF1 878 aaPredicted RBP12.39□□□□□ -0.43
HMGXB4-207ENST00000498212 COL22A1Q8NFW1 1626 aaPredicted RBP12.39□□□□□ -0.43
HMGXB4-207ENST00000498212 SOS2Q07890 1332 aaPredicted RBP12.38□□□□□ -0.43
HMGXB4-207ENST00000498212 ARHGEF28Q8N1W1 1705 aaKnown RBP12.38□□□□□ -0.43
HMGXB4-207ENST00000498212 MARF1Q9Y4F3 1742 aaKnown RBP12.38□□□□□ -0.43
HMGXB4-207ENST00000498212 STAC3Q96MF2 364 aa12.38□□□□□ -0.43
HMGXB4-207ENST00000498212 KIAA1210Q9ULL0 1709 aa12.37□□□□□ -0.43
HMGXB4-207ENST00000498212 NUTM2FA1L443 756 aa12.37□□□□□ -0.43
HMGXB4-207ENST00000498212 ADGRB2O60241 1585 aa12.37□□□□□ -0.43
HMGXB4-207ENST00000498212 NPHP3Q7Z494 1330 aa12.37□□□□□ -0.43
HMGXB4-207ENST00000498212 PXDNQ92626 1479 aa12.36□□□□□ -0.43
HMGXB4-207ENST00000498212 ZNF772Q68DY9 489 aaPredicted RBP12.36□□□□□ -0.43
HMGXB4-207ENST00000498212 PRAM1Q96QH2 718 aa12.36□□□□□ -0.43
HMGXB4-207ENST00000498212 SAFB2Q14151 953 aaKnown RBP eCLIP12.35□□□□□ -0.43
HMGXB4-207ENST00000498212 USP32Q8NFA0 1604 aa12.35□□□□□ -0.43
HMGXB4-207ENST00000498212 FOXO3O43524 673 aa12.34□□□□□ -0.43
HMGXB4-207ENST00000498212 POGKQ9P215 609 aa12.34□□□□□ -0.43
HMGXB4-207ENST00000498212 TRAK1Q9UPV9 953 aa12.34□□□□□ -0.43
HMGXB4-207ENST00000498212 C1QBPQ07021 282 aaKnown RBP12.33□□□□□ -0.44
HMGXB4-207ENST00000498212 AFF2P51816 1311 aa12.33□□□□□ -0.44
HMGXB4-207ENST00000498212 ITSN1Q15811 1721 aa12.32□□□□□ -0.44
HMGXB4-207ENST00000498212 XPCQ01831 940 aaPredicted RBP12.32□□□□□ -0.44
HMGXB4-207ENST00000498212 C8orf37Q96NL8 207 aa12.32□□□□□ -0.44
HMGXB4-207ENST00000498212 ANKARQ7Z5J8 1434 aa12.3□□□□□ -0.44
HMGXB4-207ENST00000498212 ADAMTS2O95450 1211 aa12.3□□□□□ -0.44
HMGXB4-207ENST00000498212 PHF8Q9UPP1 1060 aa12.3□□□□□ -0.44
HMGXB4-207ENST00000498212 TULP4Q9NRJ4 1543 aa12.3□□□□□ -0.44
HMGXB4-207ENST00000498212 ABCA3Q99758 1704 aa12.29□□□□□ -0.44
HMGXB4-207ENST00000498212 RXRBP28702 533 aa12.29□□□□□ -0.44
HMGXB4-207ENST00000498212 HIRIP3Q9BW71 556 aaPredicted RBP12.29□□□□□ -0.44
HMGXB4-207ENST00000498212 MINK1Q8N4C8 1332 aaPredicted RBP12.29□□□□□ -0.44
HMGXB4-207ENST00000498212 EIF3AQ14152 1382 aaKnown RBP12.29□□□□□ -0.44
HMGXB4-207ENST00000498212 TRPM3Q9HCF6 1732 aaPredicted RBP12.28□□□□□ -0.44
HMGXB4-207ENST00000498212 KRT28Q7Z3Y7 464 aa12.28□□□□□ -0.44
HMGXB4-207ENST00000498212 NGLY1Q96IV0 654 aa12.28□□□□□ -0.44
HMGXB4-207ENST00000498212 SPATA31A3Q5VYP0 1347 aa12.28□□□□□ -0.44
HMGXB4-207ENST00000498212 CDK12Q9NYV4 1490 aaPredicted RBP12.27□□□□□ -0.44
HMGXB4-207ENST00000498212 PSME1Q06323 249 aa12.27□□□□□ -0.45
HMGXB4-207ENST00000498212 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.27□□□□□ -0.45
HMGXB4-207ENST00000498212 TNS3Q68CZ2 1445 aa12.27□□□□□ -0.45
HMGXB4-207ENST00000498212 ALS2Q96Q42 1657 aa12.26□□□□□ -0.45
HMGXB4-207ENST00000498212 WASLO00401 505 aaPredicted RBP12.26□□□□□ -0.45
HMGXB4-207ENST00000498212 QTRT2Q9H974 415 aaKnown RBP12.26□□□□□ -0.45
HMGXB4-207ENST00000498212 TRPM1Q7Z4N2 1603 aa12.26□□□□□ -0.45
HMGXB4-207ENST00000498212 TOPAZ1Q8N9V7 1692 aa12.26□□□□□ -0.45
HMGXB4-207ENST00000498212 QRICH2Q9H0J4 1663 aa12.26□□□□□ -0.45
HMGXB4-207ENST00000498212 PMFBP1Q8TBY8 1022 aa12.25□□□□□ -0.45
HMGXB4-207ENST00000498212 USP21Q9UK80 565 aa12.25□□□□□ -0.45
HMGXB4-207ENST00000498212 SBNO1A3KN83 1393 aa12.25□□□□□ -0.45
HMGXB4-207ENST00000498212 PLCH1Q4KWH8 1693 aa12.25□□□□□ -0.45
HMGXB4-207ENST00000498212 RBM6P78332 1123 aaKnown RBP12.24□□□□□ -0.45
HMGXB4-207ENST00000498212 FNBP4Q8N3X1 1017 aaPredicted RBP12.24□□□□□ -0.45
HMGXB4-207ENST00000498212 PRR36Q9H6K5 1346 aa12.24□□□□□ -0.45
HMGXB4-207ENST00000498212 NWD2Q9ULI1 1742 aa12.23□□□□□ -0.45
HMGXB4-207ENST00000498212 ATP7BP35670 1465 aa12.23□□□□□ -0.45
HMGXB4-207ENST00000498212 ARHGEF10O15013 1369 aa12.23□□□□□ -0.45
HMGXB4-207ENST00000498212 NBPF1Q3BBV0 1214 aa12.23□□□□□ -0.45
HMGXB4-207ENST00000498212 L3MBTL2Q969R5 705 aa12.23□□□□□ -0.45
HMGXB4-207ENST00000498212 SIN3AQ96ST3 1273 aa12.23□□□□□ -0.45
HMGXB4-207ENST00000498212 CRYBG1Q9Y4K1 1723 aa12.23□□□□□ -0.45
HMGXB4-207ENST00000498212 RGS12O14924 1447 aa12.22□□□□□ -0.45
HMGXB4-207ENST00000498212 GPRASP1Q5JY77 1395 aa12.22□□□□□ -0.45
HMGXB4-207ENST00000498212 NEUROD1Q13562 356 aa12.22□□□□□ -0.45
HMGXB4-207ENST00000498212 TRPC5Q9UL62 973 aaPredicted RBP12.22□□□□□ -0.45
HMGXB4-207ENST00000498212 BCL9LQ86UU0 1499 aa12.21□□□□□ -0.45
HMGXB4-207ENST00000498212 ATRNO75882 1429 aa12.21□□□□□ -0.45
HMGXB4-207ENST00000498212 HAP1P54257 671 aaPredicted RBP12.21□□□□□ -0.45
HMGXB4-207ENST00000498212 LMOD2Q6P5Q4 547 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms