RNA–Protein interactions for RNA: ENST00000497935.5

NELFCD-212, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 2

Gene NELFCD, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-212ENST00000497935 DDX12PQ92771 950 aa9.77□□□□□ -0.85
NELFCD-212ENST00000497935 TBC1D2Q9BYX2 928 aa9.77□□□□□ -0.85
NELFCD-212ENST00000497935 SMARCA5O60264 1052 aaPredicted RBP9.76□□□□□ -0.85
NELFCD-212ENST00000497935 ATG7O95352 703 aa9.76□□□□□ -0.85
NELFCD-212ENST00000497935 ATP10BO94823 1461 aa9.75□□□□□ -0.85
NELFCD-212ENST00000497935 DNAJC14Q6Y2X3 702 aaPredicted RBP9.75□□□□□ -0.85
NELFCD-212ENST00000497935 TMC2Q8TDI7 906 aa9.75□□□□□ -0.85
NELFCD-212ENST00000497935 SIRT1Q96EB6 747 aa9.75□□□□□ -0.85
NELFCD-212ENST00000497935 KIF12Q96FN5 646 aa9.75□□□□□ -0.85
NELFCD-212ENST00000497935 PPRC1Q5VV67 1664 aaKnown RBP9.74□□□□□ -0.85
NELFCD-212ENST00000497935 PLEKHD1A6NEE1 506 aa9.74□□□□□ -0.85
NELFCD-212ENST00000497935 ZNF16P17020 682 aaPredicted RBP9.74□□□□□ -0.85
NELFCD-212ENST00000497935 PLPP6Q8IY26 295 aa9.74□□□□□ -0.85
NELFCD-212ENST00000497935 DHX37Q8IY37 1157 aaKnown RBP9.74□□□□□ -0.85
NELFCD-212ENST00000497935 LIMD1Q9UGP4 676 aa9.74□□□□□ -0.85
NELFCD-212ENST00000497935 MAP3K4Q9Y6R4 1608 aa9.74□□□□□ -0.85
NELFCD-212ENST00000497935 KDM4FA0A1W2PPD8 638 aa9.73□□□□□ -0.85
NELFCD-212ENST00000497935 PALM3A6NDB9 673 aaPredicted RBP9.73□□□□□ -0.85
NELFCD-212ENST00000497935 BRD2P25440 801 aaKnown RBP9.73□□□□□ -0.85
NELFCD-212ENST00000497935 CCER1Q8TC90 406 aaPredicted RBP9.73□□□□□ -0.85
NELFCD-212ENST00000497935 FARP1Q9Y4F1 1045 aaPredicted RBP9.73□□□□□ -0.85
NELFCD-212ENST00000497935 RAPGEF6Q8TEU7 1601 aa9.73□□□□□ -0.85
NELFCD-212ENST00000497935 COL17A1Q9UMD9 1497 aaPredicted RBP9.72□□□□□ -0.85
NELFCD-212ENST00000497935 SAMD9Q5K651 1589 aa9.72□□□□□ -0.85
NELFCD-212ENST00000497935 KIF21BO75037 1637 aa9.72□□□□□ -0.85
NELFCD-212ENST00000497935 LMOD1P29536 600 aaPredicted RBP9.72□□□□□ -0.85
NELFCD-212ENST00000497935 WASHC4Q2M389 1173 aa9.72□□□□□ -0.85
NELFCD-212ENST00000497935 CWC22Q9HCG8 908 aaKnown RBP9.72□□□□□ -0.85
NELFCD-212ENST00000497935 NCLP19338 710 aaKnown RBP9.71□□□□□ -0.86
NELFCD-212ENST00000497935 TSR1Q2NL82 804 aaKnown RBP9.71□□□□□ -0.86
NELFCD-212ENST00000497935 TUSC1Q2TAM9 212 aa9.71□□□□□ -0.86
NELFCD-212ENST00000497935 CFAP43Q8NDM7 1665 aa9.71□□□□□ -0.86
NELFCD-212ENST00000497935 ZEB1P37275 1124 aaPredicted RBP9.7□□□□□ -0.86
NELFCD-212ENST00000497935 RBM42Q9BTD8 480 aaKnown RBP9.7□□□□□ -0.86
NELFCD-212ENST00000497935 BCL2L13Q9BXK5 485 aa9.7□□□□□ -0.86
NELFCD-212ENST00000497935 MAGI3Q5TCQ9 1506 aa9.69□□□□□ -0.86
NELFCD-212ENST00000497935 RIC3Q7Z5B4 369 aa9.69□□□□□ -0.86
NELFCD-212ENST00000497935 ANKRD13AQ8IZ07 590 aa9.69□□□□□ -0.86
NELFCD-212ENST00000497935 NUP153P49790 1475 aaKnown RBP9.68□□□□□ -0.86
NELFCD-212ENST00000497935 RAPGEF3O95398 923 aa9.68□□□□□ -0.86
NELFCD-212ENST00000497935 CHADLQ6NUI6 762 aa9.68□□□□□ -0.86
NELFCD-212ENST00000497935 NPDC1Q9NQX5 325 aaPredicted RBP9.68□□□□□ -0.86
NELFCD-212ENST00000497935 NDUFB9Q9Y6M9 179 aa9.68□□□□□ -0.86
NELFCD-212ENST00000497935 EFCAB5A4FU69 1503 aa9.67□□□□□ -0.86
NELFCD-212ENST00000497935 ARID4BQ4LE39 1312 aaPredicted RBP9.67□□□□□ -0.86
NELFCD-212ENST00000497935 UBXN4Q92575 508 aa9.67□□□□□ -0.86
NELFCD-212ENST00000497935 ADGRL1O94910 1474 aa9.66□□□□□ -0.86
NELFCD-212ENST00000497935 AP1G2O75843 785 aa9.66□□□□□ -0.86
NELFCD-212ENST00000497935 PAK3O75914 559 aaPredicted RBP9.66□□□□□ -0.86
NELFCD-212ENST00000497935 ZC3H6P61129 1189 aaKnown RBP9.66□□□□□ -0.86
NELFCD-212ENST00000497935 CDCA8Q53HL2 280 aa9.66□□□□□ -0.86
NELFCD-212ENST00000497935 ZNF710Q8N1W2 664 aa9.66□□□□□ -0.86
NELFCD-212ENST00000497935 ILDR1Q86SU0 546 aaPredicted RBP9.65□□□□□ -0.86
NELFCD-212ENST00000497935 METTL3Q86U44 580 aaKnown RBP9.65□□□□□ -0.86
NELFCD-212ENST00000497935 ALG2Q9H553 416 aa9.65□□□□□ -0.86
NELFCD-212ENST00000497935 CDHR5Q9HBB8 845 aa9.65□□□□□ -0.86
NELFCD-212ENST00000497935 TFIP11Q9UBB9 837 aaKnown RBP9.65□□□□□ -0.86
NELFCD-212ENST00000497935 CDK13Q14004 1512 aaKnown RBP9.65□□□□□ -0.86
NELFCD-212ENST00000497935 PITPNM1O00562 1244 aa9.64□□□□□ -0.87
NELFCD-212ENST00000497935 USP17L8P0C7I0 530 aa9.64□□□□□ -0.87
NELFCD-212ENST00000497935 NOM1Q5C9Z4 860 aaKnown RBP9.64□□□□□ -0.87
NELFCD-212ENST00000497935 GIPC2Q8TF65 315 aa9.64□□□□□ -0.87
NELFCD-212ENST00000497935 NLRP7Q8WX94 980 aa9.64□□□□□ -0.87
NELFCD-212ENST00000497935 UPF1Q92900 1129 aaKnown RBP eCLIP9.64□□□□□ -0.87
NELFCD-212ENST00000497935 FMN1Q68DA7 1419 aa9.64□□□□□ -0.87
NELFCD-212ENST00000497935 ABCA9Q8IUA7 1624 aa9.64□□□□□ -0.87
NELFCD-212ENST00000497935 SPTLC1O15269 473 aa9.63□□□□□ -0.87
NELFCD-212ENST00000497935 OATP04181 439 aa9.63□□□□□ -0.87
NELFCD-212ENST00000497935 VAMP1P23763 118 aa9.63□□□□□ -0.87
NELFCD-212ENST00000497935 GJD4Q96KN9 370 aaPredicted RBP9.63□□□□□ -0.87
NELFCD-212ENST00000497935 UCN2Q96RP3 112 aa9.63□□□□□ -0.87
NELFCD-212ENST00000497935 TMEM106CQ9BVX2 250 aa9.63□□□□□ -0.87
NELFCD-212ENST00000497935 ARHGAP35Q9NRY4 1499 aa9.63□□□□□ -0.87
NELFCD-212ENST00000497935 SF3A1Q15459 793 aaKnown RBP9.62□□□□□ -0.87
NELFCD-212ENST00000497935 PHLDB1Q86UU1 1377 aa9.62□□□□□ -0.87
NELFCD-212ENST00000497935 VAC14Q08AM6 782 aa9.61□□□□□ -0.87
NELFCD-212ENST00000497935 SPIRE2Q8WWL2 714 aa9.61□□□□□ -0.87
NELFCD-212ENST00000497935 MAFBQ9Y5Q3 323 aaPredicted RBP9.61□□□□□ -0.87
NELFCD-212ENST00000497935 NEO1Q92859 1461 aa9.6□□□□□ -0.87
NELFCD-212ENST00000497935 MICALL2Q8IY33 904 aa9.6□□□□□ -0.87
NELFCD-212ENST00000497935 ARAP3Q8WWN8 1544 aa9.6□□□□□ -0.87
NELFCD-212ENST00000497935 HECW1Q76N89 1606 aa9.6□□□□□ -0.87
NELFCD-212ENST00000497935 FANCAO15360 1455 aa9.59□□□□□ -0.87
NELFCD-212ENST00000497935 AKNAQ7Z591 1439 aa9.59□□□□□ -0.87
NELFCD-212ENST00000497935 ANKRD62A6NC57 917 aa9.59□□□□□ -0.87
NELFCD-212ENST00000497935 C2orf72A6NCS6 295 aa9.59□□□□□ -0.87
NELFCD-212ENST00000497935 LILRB3O75022 631 aa9.59□□□□□ -0.87
NELFCD-212ENST00000497935 ARID4AP29374 1257 aaPredicted RBP9.59□□□□□ -0.87
NELFCD-212ENST00000497935 ELOAQ14241 798 aaKnown RBP9.59□□□□□ -0.87
NELFCD-212ENST00000497935 PHLDB3Q6NSJ2 640 aa9.59□□□□□ -0.87
NELFCD-212ENST00000497935 RSBN1LQ6PCB5 846 aaPredicted RBP9.59□□□□□ -0.87
NELFCD-212ENST00000497935 PPP1R1BQ9UD71 204 aaPredicted RBP9.59□□□□□ -0.87
NELFCD-212ENST00000497935 DENND4BO75064 1496 aaPredicted RBP9.59□□□□□ -0.87
NELFCD-212ENST00000497935 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.58□□□□□ -0.88
NELFCD-212ENST00000497935 KIF3CO14782 793 aa9.58□□□□□ -0.88
NELFCD-212ENST00000497935 EVI5O60447 810 aa9.58□□□□□ -0.88
NELFCD-212ENST00000497935 GPR37L1O60883 481 aa9.58□□□□□ -0.88
NELFCD-212ENST00000497935 EN1Q05925 392 aaPredicted RBP9.58□□□□□ -0.88
NELFCD-212ENST00000497935 MLECQ14165 292 aa9.58□□□□□ -0.88
NELFCD-212ENST00000497935 QPCTQ16769 361 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms