RNA–Protein interactions for RNA: ENST00000497758.1

MRPL55-234, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 470 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-234ENST00000497758 SAFB2Q14151 953 aaKnown RBP eCLIP16.85■□□□□ 0.29
MRPL55-234ENST00000497758 MST1RQ04912 1400 aa16.85■□□□□ 0.29
MRPL55-234ENST00000497758 DLC1Q96QB1 1528 aa16.85■□□□□ 0.29
MRPL55-234ENST00000497758 KIAA1210Q9ULL0 1709 aa16.83■□□□□ 0.28
MRPL55-234ENST00000497758 CDC42BPGQ6DT37 1551 aa16.82■□□□□ 0.28
MRPL55-234ENST00000497758 DISP3Q9P2K9 1392 aa16.82■□□□□ 0.28
MRPL55-234ENST00000497758 BRINP3Q76B58 766 aa16.82■□□□□ 0.28
MRPL55-234ENST00000497758 C1orf167Q5SNV9 1468 aa16.81■□□□□ 0.28
MRPL55-234ENST00000497758 NBPF1Q3BBV0 1214 aa16.81■□□□□ 0.28
MRPL55-234ENST00000497758 CLSPNQ9HAW4 1339 aa16.79■□□□□ 0.28
MRPL55-234ENST00000497758 ILDR2Q71H61 639 aa16.79■□□□□ 0.28
MRPL55-234ENST00000497758 ROCK2O75116 1388 aaKnown RBP16.78■□□□□ 0.28
MRPL55-234ENST00000497758 NUTM2FA1L443 756 aa16.78■□□□□ 0.28
MRPL55-234ENST00000497758 CCER1Q8TC90 406 aaPredicted RBP16.78■□□□□ 0.28
MRPL55-234ENST00000497758 MINK1Q8N4C8 1332 aaPredicted RBP16.77■□□□□ 0.28
MRPL55-234ENST00000497758 PHLPP1O60346 1717 aa16.77■□□□□ 0.28
MRPL55-234ENST00000497758 ESCO1Q5FWF5 840 aa16.77■□□□□ 0.28
MRPL55-234ENST00000497758 ORAI2Q96SN7 254 aa16.76■□□□□ 0.27
MRPL55-234ENST00000497758 HIRIP3Q9BW71 556 aaPredicted RBP16.76■□□□□ 0.27
MRPL55-234ENST00000497758 AHDC1Q5TGY3 1603 aaPredicted RBP16.76■□□□□ 0.27
MRPL55-234ENST00000497758 TRPM1Q7Z4N2 1603 aa16.74■□□□□ 0.27
MRPL55-234ENST00000497758 ARHGEF28Q8N1W1 1705 aaKnown RBP16.74■□□□□ 0.27
MRPL55-234ENST00000497758 NBPF8Q3BBV2 869 aa16.74■□□□□ 0.27
MRPL55-234ENST00000497758 EIF3AQ14152 1382 aaKnown RBP16.74■□□□□ 0.27
MRPL55-234ENST00000497758 JCADQ9P266 1359 aa16.73■□□□□ 0.27
MRPL55-234ENST00000497758 FMN2Q9NZ56 1722 aa16.73■□□□□ 0.27
MRPL55-234ENST00000497758 ADGRB2O60241 1585 aa16.72■□□□□ 0.27
MRPL55-234ENST00000497758 COL16A1Q07092 1604 aaPredicted RBP16.72■□□□□ 0.27
MRPL55-234ENST00000497758 DDX17Q92841 729 aaKnown RBP16.72■□□□□ 0.27
MRPL55-234ENST00000497758 CENPJQ9HC77 1338 aaPredicted RBP16.71■□□□□ 0.27
MRPL55-234ENST00000497758 WASLO00401 505 aaPredicted RBP16.71■□□□□ 0.27
MRPL55-234ENST00000497758 NPHP3Q7Z494 1330 aa16.7■□□□□ 0.26
MRPL55-234ENST00000497758 NHSL1Q5SYE7 1610 aa16.7■□□□□ 0.26
MRPL55-234ENST00000497758 CARD11Q9BXL7 1154 aa16.7■□□□□ 0.26
MRPL55-234ENST00000497758 ANKARQ7Z5J8 1434 aa16.7■□□□□ 0.26
MRPL55-234ENST00000497758 RALGAPBQ86X10 1494 aa16.69■□□□□ 0.26
MRPL55-234ENST00000497758 LRRC59Q96AG4 307 aaKnown RBP16.69■□□□□ 0.26
MRPL55-234ENST00000497758 TIMELESSQ9UNS1 1208 aa16.69■□□□□ 0.26
MRPL55-234ENST00000497758 GPRASP1Q5JY77 1395 aa16.68■□□□□ 0.26
MRPL55-234ENST00000497758 FOXO3O43524 673 aa16.68■□□□□ 0.26
MRPL55-234ENST00000497758 PHF8Q9UPP1 1060 aa16.68■□□□□ 0.26
MRPL55-234ENST00000497758 MED1Q15648 1581 aaPredicted RBP16.68■□□□□ 0.26
MRPL55-234ENST00000497758 TULP4Q9NRJ4 1543 aa16.67■□□□□ 0.26
MRPL55-234ENST00000497758 PHF23Q9BUL5 403 aaPredicted RBP16.66■□□□□ 0.26
MRPL55-234ENST00000497758 CDK19Q9BWU1 502 aa16.66■□□□□ 0.26
MRPL55-234ENST00000497758 SOS2Q07890 1332 aaPredicted RBP16.66■□□□□ 0.26
MRPL55-234ENST00000497758 KIF1AQ12756 1690 aa16.65■□□□□ 0.26
MRPL55-234ENST00000497758 XPCQ01831 940 aaPredicted RBP16.65■□□□□ 0.26
MRPL55-234ENST00000497758 SPATA31A6Q5VVP1 1343 aa16.65■□□□□ 0.26
MRPL55-234ENST00000497758 QRICH2Q9H0J4 1663 aa16.64■□□□□ 0.25
MRPL55-234ENST00000497758 SRPK2P78362 688 aaKnown RBP16.63■□□□□ 0.25
MRPL55-234ENST00000497758 PMFBP1Q8TBY8 1022 aa16.63■□□□□ 0.25
MRPL55-234ENST00000497758 NUDT16Q96DE0 195 aaKnown RBP16.63■□□□□ 0.25
MRPL55-234ENST00000497758 PRR36Q9H6K5 1346 aa16.63■□□□□ 0.25
MRPL55-234ENST00000497758 USP32Q8NFA0 1604 aa16.63■□□□□ 0.25
MRPL55-234ENST00000497758 SHPRHQ149N8 1683 aa16.62■□□□□ 0.25
MRPL55-234ENST00000497758 PXDNQ92626 1479 aa16.62■□□□□ 0.25
MRPL55-234ENST00000497758 PSME1Q06323 249 aa16.62■□□□□ 0.25
MRPL55-234ENST00000497758 MEX3CQ5U5Q3 659 aaKnown RBP16.62■□□□□ 0.25
MRPL55-234ENST00000497758 PNPLA6Q8IY17 1366 aa16.62■□□□□ 0.25
MRPL55-234ENST00000497758 RGPD8O14715 1765 aaPredicted RBP16.61■□□□□ 0.25
MRPL55-234ENST00000497758 NUTM2BA6NNL0 878 aaPredicted RBP16.61■□□□□ 0.25
MRPL55-234ENST00000497758 NUTM2EB1AL46 878 aaPredicted RBP16.61■□□□□ 0.25
MRPL55-234ENST00000497758 KRT28Q7Z3Y7 464 aa16.61■□□□□ 0.25
MRPL55-234ENST00000497758 NUTM2AQ8IVF1 878 aaPredicted RBP16.61■□□□□ 0.25
MRPL55-234ENST00000497758 NGDNQ8NEJ9 315 aaKnown RBP16.61■□□□□ 0.25
MRPL55-234ENST00000497758 EVC2Q86UK5 1308 aa16.61■□□□□ 0.25
MRPL55-234ENST00000497758 ATP7BP35670 1465 aa16.61■□□□□ 0.25
MRPL55-234ENST00000497758 CABP2Q9NPB3 220 aa16.59■□□□□ 0.25
MRPL55-234ENST00000497758 CCDC61Q9Y6R9 512 aa16.59■□□□□ 0.25
MRPL55-234ENST00000497758 ITSN1Q15811 1721 aa16.58■□□□□ 0.24
MRPL55-234ENST00000497758 SBNO2Q9Y2G9 1366 aa16.56■□□□□ 0.24
MRPL55-234ENST00000497758 SPATA31A3Q5VYP0 1347 aa16.56■□□□□ 0.24
MRPL55-234ENST00000497758 LMOD2Q6P5Q4 547 aa16.56■□□□□ 0.24
MRPL55-234ENST00000497758 LRP6O75581 1613 aa16.56■□□□□ 0.24
MRPL55-234ENST00000497758 TNS3Q68CZ2 1445 aa16.55■□□□□ 0.24
MRPL55-234ENST00000497758 SBNO1A3KN83 1393 aa16.55■□□□□ 0.24
MRPL55-234ENST00000497758 PPIP5K1Q6PFW1 1433 aa16.54■□□□□ 0.24
MRPL55-234ENST00000497758 USP47Q96K76 1375 aa16.54■□□□□ 0.24
MRPL55-234ENST00000497758 ARHGEF10O15013 1369 aa16.53■□□□□ 0.24
MRPL55-234ENST00000497758 ACEP12821 1306 aa16.53■□□□□ 0.24
MRPL55-234ENST00000497758 ST20-MTHFSA0A0A6YYL1 179 aa16.53■□□□□ 0.24
MRPL55-234ENST00000497758 PLEKHG3A1L390 1219 aa16.53■□□□□ 0.24
MRPL55-234ENST00000497758 PAK3O75914 559 aaPredicted RBP16.53■□□□□ 0.24
MRPL55-234ENST00000497758 ADAMTS2O95450 1211 aa16.53■□□□□ 0.24
MRPL55-234ENST00000497758 TOPAZ1Q8N9V7 1692 aa16.53■□□□□ 0.24
MRPL55-234ENST00000497758 ATAD2Q6PL18 1390 aa16.52■□□□□ 0.24
MRPL55-234ENST00000497758 SLC24A1O60721 1099 aa16.52■□□□□ 0.24
MRPL55-234ENST00000497758 HAP1P54257 671 aaPredicted RBP16.52■□□□□ 0.24
MRPL55-234ENST00000497758 COL22A1Q8NFW1 1626 aaPredicted RBP16.52■□□□□ 0.23
MRPL55-234ENST00000497758 POLR3AO14802 1390 aaPredicted RBP16.51■□□□□ 0.23
MRPL55-234ENST00000497758 CABP1Q9NZU7 370 aa16.51■□□□□ 0.23
MRPL55-234ENST00000497758 PLEKHG5O94827 1062 aa16.5■□□□□ 0.23
MRPL55-234ENST00000497758 C8orf37Q96NL8 207 aa16.5■□□□□ 0.23
MRPL55-234ENST00000497758 NGLY1Q96IV0 654 aa16.48■□□□□ 0.23
MRPL55-234ENST00000497758 TESK2Q96S53 571 aa16.48■□□□□ 0.23
MRPL55-234ENST00000497758 TRPM3Q9HCF6 1732 aaPredicted RBP16.48■□□□□ 0.23
MRPL55-234ENST00000497758 ZNF772Q68DY9 489 aaPredicted RBP16.47■□□□□ 0.23
MRPL55-234ENST00000497758 RGS17Q9UGC6 210 aaPredicted RBP16.47■□□□□ 0.23
MRPL55-234ENST00000497758 AFF2P51816 1311 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms