RNA–Protein interactions for RNA: ENST00000496969.1

SF1-219, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 455 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-219ENST00000496969 MEX3CQ5U5Q3 659 aaKnown RBP12.26□□□□□ -0.45
SF1-219ENST00000496969 DCAF11Q8TEB1 546 aa12.26□□□□□ -0.45
SF1-219ENST00000496969 STAC3Q96MF2 364 aa12.26□□□□□ -0.45
SF1-219ENST00000496969 DLC1Q96QB1 1528 aa12.26□□□□□ -0.45
SF1-219ENST00000496969 SOCS7O14512 581 aa12.25□□□□□ -0.45
SF1-219ENST00000496969 ADGRB1O14514 1584 aa12.24□□□□□ -0.45
SF1-219ENST00000496969 WAPLQ7Z5K2 1190 aa12.24□□□□□ -0.45
SF1-219ENST00000496969 LRRC59Q96AG4 307 aaKnown RBP12.24□□□□□ -0.45
SF1-219ENST00000496969 PLEKHH1Q9ULM0 1364 aa12.24□□□□□ -0.45
SF1-219ENST00000496969 KDM2AQ9Y2K7 1162 aa12.24□□□□□ -0.45
SF1-219ENST00000496969 LRP6O75581 1613 aa12.23□□□□□ -0.45
SF1-219ENST00000496969 SIRT1Q96EB6 747 aa12.23□□□□□ -0.45
SF1-219ENST00000496969 KIAA1210Q9ULL0 1709 aa12.23□□□□□ -0.45
SF1-219ENST00000496969 ADGRB2O60241 1585 aa12.22□□□□□ -0.45
SF1-219ENST00000496969 ESCO1Q5FWF5 840 aa12.22□□□□□ -0.45
SF1-219ENST00000496969 POGKQ9P215 609 aa12.22□□□□□ -0.45
SF1-219ENST00000496969 NPHP3Q7Z494 1330 aa12.21□□□□□ -0.45
SF1-219ENST00000496969 PRAM1Q96QH2 718 aa12.21□□□□□ -0.45
SF1-219ENST00000496969 ORAI2Q96SN7 254 aa12.21□□□□□ -0.45
SF1-219ENST00000496969 ARHGEF28Q8N1W1 1705 aaKnown RBP12.2□□□□□ -0.46
SF1-219ENST00000496969 EIF3AQ14152 1382 aaKnown RBP12.2□□□□□ -0.46
SF1-219ENST00000496969 PNPLA6Q8IY17 1366 aa12.2□□□□□ -0.46
SF1-219ENST00000496969 NUTM2BA6NNL0 878 aaPredicted RBP12.2□□□□□ -0.46
SF1-219ENST00000496969 NUTM2EB1AL46 878 aaPredicted RBP12.2□□□□□ -0.46
SF1-219ENST00000496969 NUTM2AQ8IVF1 878 aaPredicted RBP12.2□□□□□ -0.46
SF1-219ENST00000496969 DDX17Q92841 729 aaKnown RBP12.2□□□□□ -0.46
SF1-219ENST00000496969 COL22A1Q8NFW1 1626 aaPredicted RBP12.19□□□□□ -0.46
SF1-219ENST00000496969 NUTM2FA1L443 756 aa12.19□□□□□ -0.46
SF1-219ENST00000496969 RGPD8O14715 1765 aaPredicted RBP12.18□□□□□ -0.46
SF1-219ENST00000496969 SOS2Q07890 1332 aaPredicted RBP12.18□□□□□ -0.46
SF1-219ENST00000496969 SAFB2Q14151 953 aaKnown RBP eCLIP12.18□□□□□ -0.46
SF1-219ENST00000496969 TRAK1Q9UPV9 953 aa12.18□□□□□ -0.46
SF1-219ENST00000496969 PXDNQ92626 1479 aa12.17□□□□□ -0.46
SF1-219ENST00000496969 ZNF772Q68DY9 489 aaPredicted RBP12.17□□□□□ -0.46
SF1-219ENST00000496969 RGS17Q9UGC6 210 aaPredicted RBP12.17□□□□□ -0.46
SF1-219ENST00000496969 ANKARQ7Z5J8 1434 aa12.17□□□□□ -0.46
SF1-219ENST00000496969 ITSN1Q15811 1721 aa12.17□□□□□ -0.46
SF1-219ENST00000496969 TULP4Q9NRJ4 1543 aa12.16□□□□□ -0.46
SF1-219ENST00000496969 USP32Q8NFA0 1604 aa12.15□□□□□ -0.46
SF1-219ENST00000496969 MARF1Q9Y4F3 1742 aaKnown RBP12.14□□□□□ -0.47
SF1-219ENST00000496969 FOXO3O43524 673 aa12.14□□□□□ -0.47
SF1-219ENST00000496969 POTEAQ6S8J7 498 aa12.14□□□□□ -0.47
SF1-219ENST00000496969 MINK1Q8N4C8 1332 aaPredicted RBP12.13□□□□□ -0.47
SF1-219ENST00000496969 XPCQ01831 940 aaPredicted RBP12.13□□□□□ -0.47
SF1-219ENST00000496969 TRIM26Q12899 539 aaPredicted RBP12.13□□□□□ -0.47
SF1-219ENST00000496969 C8orf37Q96NL8 207 aa12.13□□□□□ -0.47
SF1-219ENST00000496969 PHF8Q9UPP1 1060 aa12.13□□□□□ -0.47
SF1-219ENST00000496969 AFF2P51816 1311 aa12.12□□□□□ -0.47
SF1-219ENST00000496969 TRPM1Q7Z4N2 1603 aa12.12□□□□□ -0.47
SF1-219ENST00000496969 ADAMTS2O95450 1211 aa12.12□□□□□ -0.47
SF1-219ENST00000496969 PSME1Q06323 249 aa12.12□□□□□ -0.47
SF1-219ENST00000496969 HIRIP3Q9BW71 556 aaPredicted RBP12.12□□□□□ -0.47
SF1-219ENST00000496969 TNS3Q68CZ2 1445 aa12.11□□□□□ -0.47
SF1-219ENST00000496969 QRICH2Q9H0J4 1663 aa12.11□□□□□ -0.47
SF1-219ENST00000496969 NEUROD1Q13562 356 aa12.11□□□□□ -0.47
SF1-219ENST00000496969 WASLO00401 505 aaPredicted RBP12.1□□□□□ -0.47
SF1-219ENST00000496969 KRT28Q7Z3Y7 464 aa12.1□□□□□ -0.47
SF1-219ENST00000496969 SIN3AQ96ST3 1273 aa12.1□□□□□ -0.47
SF1-219ENST00000496969 ABCA3Q99758 1704 aa12.09□□□□□ -0.47
SF1-219ENST00000496969 GPRASP1Q5JY77 1395 aa12.09□□□□□ -0.47
SF1-219ENST00000496969 HAP1P54257 671 aaPredicted RBP12.09□□□□□ -0.47
SF1-219ENST00000496969 NGLY1Q96IV0 654 aa12.09□□□□□ -0.47
SF1-219ENST00000496969 TOPAZ1Q8N9V7 1692 aa12.09□□□□□ -0.47
SF1-219ENST00000496969 SPATA31A3Q5VYP0 1347 aa12.09□□□□□ -0.47
SF1-219ENST00000496969 SBNO1A3KN83 1393 aa12.08□□□□□ -0.48
SF1-219ENST00000496969 ARHGEF10O15013 1369 aa12.08□□□□□ -0.48
SF1-219ENST00000496969 RXRBP28702 533 aa12.08□□□□□ -0.48
SF1-219ENST00000496969 PMFBP1Q8TBY8 1022 aa12.08□□□□□ -0.48
SF1-219ENST00000496969 L3MBTL2Q969R5 705 aa12.08□□□□□ -0.48
SF1-219ENST00000496969 TRPM3Q9HCF6 1732 aaPredicted RBP12.08□□□□□ -0.48
SF1-219ENST00000496969 ATP7BP35670 1465 aa12.08□□□□□ -0.48
SF1-219ENST00000496969 CDK12Q9NYV4 1490 aaPredicted RBP12.08□□□□□ -0.48
SF1-219ENST00000496969 TONSLQ96HA7 1378 aa12.07□□□□□ -0.48
SF1-219ENST00000496969 LMOD2Q6P5Q4 547 aa12.07□□□□□ -0.48
SF1-219ENST00000496969 CENPJQ9HC77 1338 aaPredicted RBP12.07□□□□□ -0.48
SF1-219ENST00000496969 ROCK2O75116 1388 aaKnown RBP12.06□□□□□ -0.48
SF1-219ENST00000496969 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.06□□□□□ -0.48
SF1-219ENST00000496969 NBPF1Q3BBV0 1214 aa12.06□□□□□ -0.48
SF1-219ENST00000496969 USP21Q9UK80 565 aa12.06□□□□□ -0.48
SF1-219ENST00000496969 ALS2Q96Q42 1657 aa12.06□□□□□ -0.48
SF1-219ENST00000496969 PRR36Q9H6K5 1346 aa12.06□□□□□ -0.48
SF1-219ENST00000496969 NGDNQ8NEJ9 315 aaKnown RBP12.05□□□□□ -0.48
SF1-219ENST00000496969 PLCH1Q4KWH8 1693 aa12.04□□□□□ -0.48
SF1-219ENST00000496969 RBM6P78332 1123 aaKnown RBP12.04□□□□□ -0.48
SF1-219ENST00000496969 CDK19Q9BWU1 502 aa12.04□□□□□ -0.48
SF1-219ENST00000496969 TRPC5Q9UL62 973 aaPredicted RBP12.04□□□□□ -0.48
SF1-219ENST00000496969 SRPK2P78362 688 aaKnown RBP12.03□□□□□ -0.48
SF1-219ENST00000496969 NUDT16Q96DE0 195 aaKnown RBP12.03□□□□□ -0.48
SF1-219ENST00000496969 QTRT2Q9H974 415 aaKnown RBP12.03□□□□□ -0.48
SF1-219ENST00000496969 NWD2Q9ULI1 1742 aa12.03□□□□□ -0.48
SF1-219ENST00000496969 RGS12O14924 1447 aa12.03□□□□□ -0.48
SF1-219ENST00000496969 PAK3O75914 559 aaPredicted RBP12.02□□□□□ -0.49
SF1-219ENST00000496969 PLEKHG5O94827 1062 aa12.02□□□□□ -0.49
SF1-219ENST00000496969 FNBP4Q8N3X1 1017 aaPredicted RBP12.02□□□□□ -0.49
SF1-219ENST00000496969 ATRNO75882 1429 aa12.02□□□□□ -0.49
SF1-219ENST00000496969 PHRF1Q9P1Y6 1649 aaKnown RBP12.01□□□□□ -0.49
SF1-219ENST00000496969 CRYBG1Q9Y4K1 1723 aa12.01□□□□□ -0.49
SF1-219ENST00000496969 CCDC61Q9Y6R9 512 aa12.01□□□□□ -0.49
SF1-219ENST00000496969 PPIP5K1Q6PFW1 1433 aa12.01□□□□□ -0.49
SF1-219ENST00000496969 RALGAPBQ86X10 1494 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms