RNA–Protein interactions for RNA: ENST00000496633.1

CDHR3-214, Transcript of cadherin related family member 3, humanhuman

TSL 5

Gene CDHR3, Length 949 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-214ENST00000496633 AMER1Q5JTC6 1135 aaPredicted RBP10.9□□□□□ -0.66
CDHR3-214ENST00000496633 LRRC59Q96AG4 307 aaKnown RBP10.9□□□□□ -0.66
CDHR3-214ENST00000496633 PHLPP1O60346 1717 aa10.89□□□□□ -0.67
CDHR3-214ENST00000496633 SPATA31A6Q5VVP1 1343 aa10.89□□□□□ -0.67
CDHR3-214ENST00000496633 BRINP3Q76B58 766 aa10.89□□□□□ -0.67
CDHR3-214ENST00000496633 DISP3Q9P2K9 1392 aa10.89□□□□□ -0.67
CDHR3-214ENST00000496633 ASXL1Q8IXJ9 1541 aa10.89□□□□□ -0.67
CDHR3-214ENST00000496633 C1orf167Q5SNV9 1468 aa10.88□□□□□ -0.67
CDHR3-214ENST00000496633 ADGRB1O14514 1584 aa10.88□□□□□ -0.67
CDHR3-214ENST00000496633 TONSLQ96HA7 1378 aa10.88□□□□□ -0.67
CDHR3-214ENST00000496633 NPHP3Q7Z494 1330 aa10.87□□□□□ -0.67
CDHR3-214ENST00000496633 PRAM1Q96QH2 718 aa10.87□□□□□ -0.67
CDHR3-214ENST00000496633 TIMELESSQ9UNS1 1208 aa10.87□□□□□ -0.67
CDHR3-214ENST00000496633 ANKARQ7Z5J8 1434 aa10.86□□□□□ -0.67
CDHR3-214ENST00000496633 NEUROD1Q13562 356 aa10.86□□□□□ -0.67
CDHR3-214ENST00000496633 WAPLQ7Z5K2 1190 aa10.86□□□□□ -0.67
CDHR3-214ENST00000496633 L3MBTL2Q969R5 705 aa10.86□□□□□ -0.67
CDHR3-214ENST00000496633 NHSL1Q5SYE7 1610 aa10.86□□□□□ -0.67
CDHR3-214ENST00000496633 ADGRB2O60241 1585 aa10.86□□□□□ -0.67
CDHR3-214ENST00000496633 COL16A1Q07092 1604 aaPredicted RBP10.85□□□□□ -0.67
CDHR3-214ENST00000496633 ESCO1Q5FWF5 840 aa10.85□□□□□ -0.67
CDHR3-214ENST00000496633 TRAK1Q9UPV9 953 aa10.85□□□□□ -0.67
CDHR3-214ENST00000496633 KIF1AQ12756 1690 aa10.85□□□□□ -0.67
CDHR3-214ENST00000496633 PSME1Q06323 249 aa10.84□□□□□ -0.67
CDHR3-214ENST00000496633 MED1Q15648 1581 aaPredicted RBP10.84□□□□□ -0.67
CDHR3-214ENST00000496633 SHPRHQ149N8 1683 aa10.84□□□□□ -0.67
CDHR3-214ENST00000496633 FMN2Q9NZ56 1722 aa10.84□□□□□ -0.67
CDHR3-214ENST00000496633 SIN3AQ96ST3 1273 aa10.83□□□□□ -0.68
CDHR3-214ENST00000496633 SOS2Q07890 1332 aaPredicted RBP10.83□□□□□ -0.68
CDHR3-214ENST00000496633 ROCK2O75116 1388 aaKnown RBP10.81□□□□□ -0.68
CDHR3-214ENST00000496633 PLEKHH1Q9ULM0 1364 aa10.81□□□□□ -0.68
CDHR3-214ENST00000496633 WASLO00401 505 aaPredicted RBP10.81□□□□□ -0.68
CDHR3-214ENST00000496633 ORAI2Q96SN7 254 aa10.81□□□□□ -0.68
CDHR3-214ENST00000496633 PHF8Q9UPP1 1060 aa10.81□□□□□ -0.68
CDHR3-214ENST00000496633 ARHGEF28Q8N1W1 1705 aaKnown RBP10.81□□□□□ -0.68
CDHR3-214ENST00000496633 SAFB2Q14151 953 aaKnown RBP eCLIP10.8□□□□□ -0.68
CDHR3-214ENST00000496633 MEX3CQ5U5Q3 659 aaKnown RBP10.8□□□□□ -0.68
CDHR3-214ENST00000496633 CENPJQ9HC77 1338 aaPredicted RBP10.8□□□□□ -0.68
CDHR3-214ENST00000496633 TRPM1Q7Z4N2 1603 aa10.8□□□□□ -0.68
CDHR3-214ENST00000496633 TULP4Q9NRJ4 1543 aa10.79□□□□□ -0.68
CDHR3-214ENST00000496633 GPRASP1Q5JY77 1395 aa10.79□□□□□ -0.68
CDHR3-214ENST00000496633 PCGF6Q9BYE7 350 aa10.79□□□□□ -0.68
CDHR3-214ENST00000496633 RTN4Q9NQC3 1192 aaKnown RBP10.79□□□□□ -0.68
CDHR3-214ENST00000496633 MINK1Q8N4C8 1332 aaPredicted RBP10.79□□□□□ -0.68
CDHR3-214ENST00000496633 ITSN1Q15811 1721 aa10.78□□□□□ -0.68
CDHR3-214ENST00000496633 FOXO3O43524 673 aa10.78□□□□□ -0.68
CDHR3-214ENST00000496633 ZNF772Q68DY9 489 aaPredicted RBP10.78□□□□□ -0.68
CDHR3-214ENST00000496633 ARHGEF10O15013 1369 aa10.77□□□□□ -0.68
CDHR3-214ENST00000496633 NBPF1Q3BBV0 1214 aa10.77□□□□□ -0.69
CDHR3-214ENST00000496633 CCDC61Q9Y6R9 512 aa10.77□□□□□ -0.69
CDHR3-214ENST00000496633 EVC2Q86UK5 1308 aa10.77□□□□□ -0.69
CDHR3-214ENST00000496633 SBNO1A3KN83 1393 aa10.77□□□□□ -0.69
CDHR3-214ENST00000496633 PNPLA6Q8IY17 1366 aa10.77□□□□□ -0.69
CDHR3-214ENST00000496633 NUTM2FA1L443 756 aa10.76□□□□□ -0.69
CDHR3-214ENST00000496633 KRT28Q7Z3Y7 464 aa10.76□□□□□ -0.69
CDHR3-214ENST00000496633 NGDNQ8NEJ9 315 aaKnown RBP10.76□□□□□ -0.69
CDHR3-214ENST00000496633 CARD11Q9BXL7 1154 aa10.76□□□□□ -0.69
CDHR3-214ENST00000496633 BRD4O60885 1362 aaPredicted RBP10.76□□□□□ -0.69
CDHR3-214ENST00000496633 SBNO2Q9Y2G9 1366 aa10.76□□□□□ -0.69
CDHR3-214ENST00000496633 RALGAPBQ86X10 1494 aa10.75□□□□□ -0.69
CDHR3-214ENST00000496633 PXDNQ92626 1479 aa10.75□□□□□ -0.69
CDHR3-214ENST00000496633 NUDT16Q96DE0 195 aaKnown RBP10.75□□□□□ -0.69
CDHR3-214ENST00000496633 HIRIP3Q9BW71 556 aaPredicted RBP10.75□□□□□ -0.69
CDHR3-214ENST00000496633 CDK19Q9BWU1 502 aa10.75□□□□□ -0.69
CDHR3-214ENST00000496633 COL22A1Q8NFW1 1626 aaPredicted RBP10.75□□□□□ -0.69
CDHR3-214ENST00000496633 SRPK2P78362 688 aaKnown RBP10.74□□□□□ -0.69
CDHR3-214ENST00000496633 CCER1Q8TC90 406 aaPredicted RBP10.74□□□□□ -0.69
CDHR3-214ENST00000496633 SPATA31A3Q5VYP0 1347 aa10.74□□□□□ -0.69
CDHR3-214ENST00000496633 QRICH2Q9H0J4 1663 aa10.73□□□□□ -0.69
CDHR3-214ENST00000496633 PLEKHG3A1L390 1219 aa10.73□□□□□ -0.69
CDHR3-214ENST00000496633 NUTM2BA6NNL0 878 aaPredicted RBP10.73□□□□□ -0.69
CDHR3-214ENST00000496633 NUTM2EB1AL46 878 aaPredicted RBP10.73□□□□□ -0.69
CDHR3-214ENST00000496633 HAP1P54257 671 aaPredicted RBP10.73□□□□□ -0.69
CDHR3-214ENST00000496633 NUTM2AQ8IVF1 878 aaPredicted RBP10.73□□□□□ -0.69
CDHR3-214ENST00000496633 PUS7Q96PZ0 661 aaKnown RBP10.73□□□□□ -0.69
CDHR3-214ENST00000496633 ATAD2Q6PL18 1390 aa10.73□□□□□ -0.69
CDHR3-214ENST00000496633 TNS3Q68CZ2 1445 aa10.73□□□□□ -0.69
CDHR3-214ENST00000496633 RGPD8O14715 1765 aaPredicted RBP10.72□□□□□ -0.69
CDHR3-214ENST00000496633 DDX17Q92841 729 aaKnown RBP10.72□□□□□ -0.69
CDHR3-214ENST00000496633 ZNF692Q9BU19 519 aaPredicted RBP10.72□□□□□ -0.69
CDHR3-214ENST00000496633 ATP7BP35670 1465 aa10.72□□□□□ -0.69
CDHR3-214ENST00000496633 USP32Q8NFA0 1604 aa10.72□□□□□ -0.69
CDHR3-214ENST00000496633 POLR3AO14802 1390 aaPredicted RBP10.71□□□□□ -0.69
CDHR3-214ENST00000496633 PMFBP1Q8TBY8 1022 aa10.71□□□□□ -0.69
CDHR3-214ENST00000496633 NGLY1Q96IV0 654 aa10.71□□□□□ -0.69
CDHR3-214ENST00000496633 NBPF8Q3BBV2 869 aa10.7□□□□□ -0.7
CDHR3-214ENST00000496633 CDCA8Q53HL2 280 aa10.7□□□□□ -0.7
CDHR3-214ENST00000496633 LRP6O75581 1613 aa10.69□□□□□ -0.7
CDHR3-214ENST00000496633 PRR36Q9H6K5 1346 aa10.69□□□□□ -0.7
CDHR3-214ENST00000496633 SOCS7O14512 581 aa10.69□□□□□ -0.7
CDHR3-214ENST00000496633 LMOD2Q6P5Q4 547 aa10.69□□□□□ -0.7
CDHR3-214ENST00000496633 TOPAZ1Q8N9V7 1692 aa10.69□□□□□ -0.7
CDHR3-214ENST00000496633 PPIP5K1Q6PFW1 1433 aa10.68□□□□□ -0.7
CDHR3-214ENST00000496633 NINLQ9Y2I6 1382 aa10.68□□□□□ -0.7
CDHR3-214ENST00000496633 ACEP12821 1306 aa10.68□□□□□ -0.7
CDHR3-214ENST00000496633 PAK3O75914 559 aaPredicted RBP10.68□□□□□ -0.7
CDHR3-214ENST00000496633 XPCQ01831 940 aaPredicted RBP10.68□□□□□ -0.7
CDHR3-214ENST00000496633 NCBP3Q53F19 620 aaKnown RBP10.68□□□□□ -0.7
CDHR3-214ENST00000496633 FNBP4Q8N3X1 1017 aaPredicted RBP10.68□□□□□ -0.7
CDHR3-214ENST00000496633 C8orf37Q96NL8 207 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms