RNA–Protein interactions for RNA: ENST00000496570.1

DNMT3A-215, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 3

Gene DNMT3A, Length 656 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-215ENST00000496570 L3MBTL2Q969R5 705 aa23.41■■□□□ 1.34
DNMT3A-215ENST00000496570 KIAA1210Q9ULL0 1709 aa23.41■■□□□ 1.34
DNMT3A-215ENST00000496570 NHSL1Q5SYE7 1610 aa23.4■■□□□ 1.34
DNMT3A-215ENST00000496570 MED1Q15648 1581 aaPredicted RBP23.4■■□□□ 1.34
DNMT3A-215ENST00000496570 NEUROD1Q13562 356 aa23.38■■□□□ 1.33
DNMT3A-215ENST00000496570 PRAM1Q96QH2 718 aa23.37■■□□□ 1.33
DNMT3A-215ENST00000496570 FMN2Q9NZ56 1722 aa23.36■■□□□ 1.33
DNMT3A-215ENST00000496570 TRAK1Q9UPV9 953 aa23.35■■□□□ 1.33
DNMT3A-215ENST00000496570 ARHGEF28Q8N1W1 1705 aaKnown RBP23.35■■□□□ 1.33
DNMT3A-215ENST00000496570 NBPF1Q3BBV0 1214 aa23.34■■□□□ 1.33
DNMT3A-215ENST00000496570 ORAI2Q96SN7 254 aa23.34■■□□□ 1.33
DNMT3A-215ENST00000496570 DISP3Q9P2K9 1392 aa23.34■■□□□ 1.33
DNMT3A-215ENST00000496570 ADGRB2O60241 1585 aa23.33■■□□□ 1.33
DNMT3A-215ENST00000496570 DDX17Q92841 729 aaKnown RBP23.33■■□□□ 1.33
DNMT3A-215ENST00000496570 SAFB2Q14151 953 aaKnown RBP eCLIP23.31■■□□□ 1.32
DNMT3A-215ENST00000496570 TRPM1Q7Z4N2 1603 aa23.3■■□□□ 1.32
DNMT3A-215ENST00000496570 JCADQ9P266 1359 aa23.29■■□□□ 1.32
DNMT3A-215ENST00000496570 PCGF6Q9BYE7 350 aa23.29■■□□□ 1.32
DNMT3A-215ENST00000496570 SHPRHQ149N8 1683 aa23.28■■□□□ 1.32
DNMT3A-215ENST00000496570 POGKQ9P215 609 aa23.28■■□□□ 1.32
DNMT3A-215ENST00000496570 NUTM2FA1L443 756 aa23.27■■□□□ 1.32
DNMT3A-215ENST00000496570 USP32Q8NFA0 1604 aa23.26■■□□□ 1.31
DNMT3A-215ENST00000496570 RGPD8O14715 1765 aaPredicted RBP23.26■■□□□ 1.31
DNMT3A-215ENST00000496570 NBPF8Q3BBV2 869 aa23.25■■□□□ 1.31
DNMT3A-215ENST00000496570 ESCO1Q5FWF5 840 aa23.24■■□□□ 1.31
DNMT3A-215ENST00000496570 SOS2Q07890 1332 aaPredicted RBP23.24■■□□□ 1.31
DNMT3A-215ENST00000496570 HIRIP3Q9BW71 556 aaPredicted RBP23.23■■□□□ 1.31
DNMT3A-215ENST00000496570 MINK1Q8N4C8 1332 aaPredicted RBP23.23■■□□□ 1.31
DNMT3A-215ENST00000496570 LRP6O75581 1613 aa23.22■■□□□ 1.31
DNMT3A-215ENST00000496570 PXDNQ92626 1479 aa23.22■■□□□ 1.31
DNMT3A-215ENST00000496570 KIF1AQ12756 1690 aa23.2■■□□□ 1.3
DNMT3A-215ENST00000496570 ANKARQ7Z5J8 1434 aa23.2■■□□□ 1.3
DNMT3A-215ENST00000496570 ILDR2Q71H61 639 aa23.2■■□□□ 1.3
DNMT3A-215ENST00000496570 LRRC59Q96AG4 307 aaKnown RBP23.19■■□□□ 1.3
DNMT3A-215ENST00000496570 PNPLA6Q8IY17 1366 aa23.18■■□□□ 1.3
DNMT3A-215ENST00000496570 TONSLQ96HA7 1378 aa23.18■■□□□ 1.3
DNMT3A-215ENST00000496570 SPATA31A6Q5VVP1 1343 aa23.18■■□□□ 1.3
DNMT3A-215ENST00000496570 PRR36Q9H6K5 1346 aa23.18■■□□□ 1.3
DNMT3A-215ENST00000496570 TULP4Q9NRJ4 1543 aa23.18■■□□□ 1.3
DNMT3A-215ENST00000496570 WASLO00401 505 aaPredicted RBP23.17■■□□□ 1.3
DNMT3A-215ENST00000496570 FOXO3O43524 673 aa23.17■■□□□ 1.3
DNMT3A-215ENST00000496570 RGS17Q9UGC6 210 aaPredicted RBP23.17■■□□□ 1.3
DNMT3A-215ENST00000496570 GPRASP1Q5JY77 1395 aa23.16■■□□□ 1.3
DNMT3A-215ENST00000496570 NPHP3Q7Z494 1330 aa23.16■■□□□ 1.3
DNMT3A-215ENST00000496570 ROCK2O75116 1388 aaKnown RBP23.14■■□□□ 1.3
DNMT3A-215ENST00000496570 XPCQ01831 940 aaPredicted RBP23.14■■□□□ 1.29
DNMT3A-215ENST00000496570 PHF8Q9UPP1 1060 aa23.14■■□□□ 1.29
DNMT3A-215ENST00000496570 ATP7BP35670 1465 aa23.13■■□□□ 1.29
DNMT3A-215ENST00000496570 QRICH2Q9H0J4 1663 aa23.13■■□□□ 1.29
DNMT3A-215ENST00000496570 RALGAPBQ86X10 1494 aa23.12■■□□□ 1.29
DNMT3A-215ENST00000496570 COL22A1Q8NFW1 1626 aaPredicted RBP23.12■■□□□ 1.29
DNMT3A-215ENST00000496570 CENPJQ9HC77 1338 aaPredicted RBP23.11■■□□□ 1.29
DNMT3A-215ENST00000496570 EIF3AQ14152 1382 aaKnown RBP23.11■■□□□ 1.29
DNMT3A-215ENST00000496570 PHF23Q9BUL5 403 aaPredicted RBP23.1■■□□□ 1.29
DNMT3A-215ENST00000496570 CDK19Q9BWU1 502 aa23.09■■□□□ 1.29
DNMT3A-215ENST00000496570 TOPAZ1Q8N9V7 1692 aa23.09■■□□□ 1.29
DNMT3A-215ENST00000496570 CLSPNQ9HAW4 1339 aa23.08■■□□□ 1.29
DNMT3A-215ENST00000496570 PMFBP1Q8TBY8 1022 aa23.08■■□□□ 1.29
DNMT3A-215ENST00000496570 NUTM2BA6NNL0 878 aaPredicted RBP23.06■■□□□ 1.28
DNMT3A-215ENST00000496570 NUTM2EB1AL46 878 aaPredicted RBP23.06■■□□□ 1.28
DNMT3A-215ENST00000496570 KRT28Q7Z3Y7 464 aa23.06■■□□□ 1.28
DNMT3A-215ENST00000496570 NUTM2AQ8IVF1 878 aaPredicted RBP23.06■■□□□ 1.28
DNMT3A-215ENST00000496570 NUDT16Q96DE0 195 aaKnown RBP23.06■■□□□ 1.28
DNMT3A-215ENST00000496570 SPATA31A3Q5VYP0 1347 aa23.06■■□□□ 1.28
DNMT3A-215ENST00000496570 ITSN1Q15811 1721 aa23.05■■□□□ 1.28
DNMT3A-215ENST00000496570 TRPM3Q9HCF6 1732 aaPredicted RBP23.05■■□□□ 1.28
DNMT3A-215ENST00000496570 SBNO1A3KN83 1393 aa23.02■■□□□ 1.28
DNMT3A-215ENST00000496570 TNS3Q68CZ2 1445 aa23.02■■□□□ 1.28
DNMT3A-215ENST00000496570 POTEAQ6S8J7 498 aa23.02■■□□□ 1.28
DNMT3A-215ENST00000496570 CARD11Q9BXL7 1154 aa23.02■■□□□ 1.28
DNMT3A-215ENST00000496570 PSME1Q06323 249 aa22.99■■□□□ 1.27
DNMT3A-215ENST00000496570 MEX3CQ5U5Q3 659 aaKnown RBP22.99■■□□□ 1.27
DNMT3A-215ENST00000496570 CABP2Q9NPB3 220 aa22.99■■□□□ 1.27
DNMT3A-215ENST00000496570 ALS2Q96Q42 1657 aa22.99■■□□□ 1.27
DNMT3A-215ENST00000496570 POLR3AO14802 1390 aaPredicted RBP22.99■■□□□ 1.27
DNMT3A-215ENST00000496570 CCDC61Q9Y6R9 512 aa22.98■■□□□ 1.27
DNMT3A-215ENST00000496570 PLEKHG3A1L390 1219 aa22.97■■□□□ 1.27
DNMT3A-215ENST00000496570 TIMELESSQ9UNS1 1208 aa22.97■■□□□ 1.27
DNMT3A-215ENST00000496570 SBNO2Q9Y2G9 1366 aa22.96■■□□□ 1.27
DNMT3A-215ENST00000496570 ADAMTS2O95450 1211 aa22.95■■□□□ 1.26
DNMT3A-215ENST00000496570 SRPK2P78362 688 aaKnown RBP22.95■■□□□ 1.26
DNMT3A-215ENST00000496570 NGDNQ8NEJ9 315 aaKnown RBP22.95■■□□□ 1.26
DNMT3A-215ENST00000496570 ABCA3Q99758 1704 aa22.95■■□□□ 1.26
DNMT3A-215ENST00000496570 MARF1Q9Y4F3 1742 aaKnown RBP22.95■■□□□ 1.26
DNMT3A-215ENST00000496570 PPIP5K1Q6PFW1 1433 aa22.94■■□□□ 1.26
DNMT3A-215ENST00000496570 ACEP12821 1306 aa22.94■■□□□ 1.26
DNMT3A-215ENST00000496570 CCER1Q8TC90 406 aaPredicted RBP22.94■■□□□ 1.26
DNMT3A-215ENST00000496570 AFF2P51816 1311 aa22.93■■□□□ 1.26
DNMT3A-215ENST00000496570 EVC2Q86UK5 1308 aa22.93■■□□□ 1.26
DNMT3A-215ENST00000496570 C8orf37Q96NL8 207 aa22.93■■□□□ 1.26
DNMT3A-215ENST00000496570 ARHGEF10O15013 1369 aa22.92■■□□□ 1.26
DNMT3A-215ENST00000496570 CRYBG1Q9Y4K1 1723 aa22.91■■□□□ 1.26
DNMT3A-215ENST00000496570 CABLES1Q8TDN4 633 aa22.9■■□□□ 1.26
DNMT3A-215ENST00000496570 ZNF772Q68DY9 489 aaPredicted RBP22.89■■□□□ 1.25
DNMT3A-215ENST00000496570 TESK2Q96S53 571 aa22.88■■□□□ 1.25
DNMT3A-215ENST00000496570 CABP1Q9NZU7 370 aa22.88■■□□□ 1.25
DNMT3A-215ENST00000496570 SOCS7O14512 581 aa22.87■■□□□ 1.25
DNMT3A-215ENST00000496570 LMOD2Q6P5Q4 547 aa22.87■■□□□ 1.25
DNMT3A-215ENST00000496570 FNBP4Q8N3X1 1017 aaPredicted RBP22.87■■□□□ 1.25
DNMT3A-215ENST00000496570 NGLY1Q96IV0 654 aa22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms