RNA–Protein interactions for RNA: ENST00000496335.1

PDAP1-204, Transcript of PDGFA associated protein 1, humanhuman

TSL 3

Gene PDAP1, Length 302 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-204ENST00000496335 STAC3Q96MF2 364 aa21.06■□□□□ 0.96
PDAP1-204ENST00000496335 NHSL1Q5SYE7 1610 aa21.06■□□□□ 0.96
PDAP1-204ENST00000496335 ADGRB1O14514 1584 aa21.06■□□□□ 0.96
PDAP1-204ENST00000496335 CDC42BPGQ6DT37 1551 aa21.06■□□□□ 0.96
PDAP1-204ENST00000496335 TRIM26Q12899 539 aaPredicted RBP21.05■□□□□ 0.96
PDAP1-204ENST00000496335 SIRT1Q96EB6 747 aa21.05■□□□□ 0.96
PDAP1-204ENST00000496335 NUTM2FA1L443 756 aa21.03■□□□□ 0.96
PDAP1-204ENST00000496335 SAFB2Q14151 953 aaKnown RBP eCLIP21.03■□□□□ 0.96
PDAP1-204ENST00000496335 PRAM1Q96QH2 718 aa21.03■□□□□ 0.96
PDAP1-204ENST00000496335 SIN3AQ96ST3 1273 aa21.02■□□□□ 0.96
PDAP1-204ENST00000496335 TRAK1Q9UPV9 953 aa21.02■□□□□ 0.96
PDAP1-204ENST00000496335 ESCO1Q5FWF5 840 aa21■□□□□ 0.95
PDAP1-204ENST00000496335 SHPRHQ149N8 1683 aa20.99■□□□□ 0.95
PDAP1-204ENST00000496335 DLC1Q96QB1 1528 aa20.99■□□□□ 0.95
PDAP1-204ENST00000496335 POGKQ9P215 609 aa20.99■□□□□ 0.95
PDAP1-204ENST00000496335 RGS17Q9UGC6 210 aaPredicted RBP20.99■□□□□ 0.95
PDAP1-204ENST00000496335 FMN2Q9NZ56 1722 aa20.98■□□□□ 0.95
PDAP1-204ENST00000496335 NEUROD1Q13562 356 aa20.98■□□□□ 0.95
PDAP1-204ENST00000496335 LRRC59Q96AG4 307 aaKnown RBP20.97■□□□□ 0.95
PDAP1-204ENST00000496335 SPATA31A6Q5VVP1 1343 aa20.97■□□□□ 0.95
PDAP1-204ENST00000496335 LRP6O75581 1613 aa20.96■□□□□ 0.95
PDAP1-204ENST00000496335 RGPD8O14715 1765 aaPredicted RBP20.95■□□□□ 0.94
PDAP1-204ENST00000496335 L3MBTL2Q969R5 705 aa20.95■□□□□ 0.94
PDAP1-204ENST00000496335 NUTM2BA6NNL0 878 aaPredicted RBP20.94■□□□□ 0.94
PDAP1-204ENST00000496335 NUTM2EB1AL46 878 aaPredicted RBP20.94■□□□□ 0.94
PDAP1-204ENST00000496335 NUTM2AQ8IVF1 878 aaPredicted RBP20.94■□□□□ 0.94
PDAP1-204ENST00000496335 SOS2Q07890 1332 aaPredicted RBP20.94■□□□□ 0.94
PDAP1-204ENST00000496335 FOXO3O43524 673 aa20.93■□□□□ 0.94
PDAP1-204ENST00000496335 NBPF1Q3BBV0 1214 aa20.93■□□□□ 0.94
PDAP1-204ENST00000496335 HIRIP3Q9BW71 556 aaPredicted RBP20.93■□□□□ 0.94
PDAP1-204ENST00000496335 KIAA1210Q9ULL0 1709 aa20.92■□□□□ 0.94
PDAP1-204ENST00000496335 MINK1Q8N4C8 1332 aaPredicted RBP20.92■□□□□ 0.94
PDAP1-204ENST00000496335 PNPLA6Q8IY17 1366 aa20.92■□□□□ 0.94
PDAP1-204ENST00000496335 ARHGEF28Q8N1W1 1705 aaKnown RBP20.92■□□□□ 0.94
PDAP1-204ENST00000496335 XPCQ01831 940 aaPredicted RBP20.91■□□□□ 0.94
PDAP1-204ENST00000496335 NPHP3Q7Z494 1330 aa20.9■□□□□ 0.94
PDAP1-204ENST00000496335 MEX3CQ5U5Q3 659 aaKnown RBP20.9■□□□□ 0.94
PDAP1-204ENST00000496335 SOCS7O14512 581 aa20.89■□□□□ 0.93
PDAP1-204ENST00000496335 POTEAQ6S8J7 498 aa20.89■□□□□ 0.93
PDAP1-204ENST00000496335 ADGRB2O60241 1585 aa20.89■□□□□ 0.93
PDAP1-204ENST00000496335 PXDNQ92626 1479 aa20.88■□□□□ 0.93
PDAP1-204ENST00000496335 USP32Q8NFA0 1604 aa20.86■□□□□ 0.93
PDAP1-204ENST00000496335 PHF8Q9UPP1 1060 aa20.86■□□□□ 0.93
PDAP1-204ENST00000496335 KIF1AQ12756 1690 aa20.86■□□□□ 0.93
PDAP1-204ENST00000496335 WASLO00401 505 aaPredicted RBP20.84■□□□□ 0.93
PDAP1-204ENST00000496335 PMFBP1Q8TBY8 1022 aa20.83■□□□□ 0.93
PDAP1-204ENST00000496335 ANKARQ7Z5J8 1434 aa20.83■□□□□ 0.93
PDAP1-204ENST00000496335 PRR36Q9H6K5 1346 aa20.82■□□□□ 0.92
PDAP1-204ENST00000496335 KRT28Q7Z3Y7 464 aa20.82■□□□□ 0.92
PDAP1-204ENST00000496335 ADAMTS2O95450 1211 aa20.81■□□□□ 0.92
PDAP1-204ENST00000496335 TULP4Q9NRJ4 1543 aa20.8■□□□□ 0.92
PDAP1-204ENST00000496335 TRPM1Q7Z4N2 1603 aa20.8■□□□□ 0.92
PDAP1-204ENST00000496335 COL22A1Q8NFW1 1626 aaPredicted RBP20.79■□□□□ 0.92
PDAP1-204ENST00000496335 NBPF8Q3BBV2 869 aa20.79■□□□□ 0.92
PDAP1-204ENST00000496335 C8orf37Q96NL8 207 aa20.79■□□□□ 0.92
PDAP1-204ENST00000496335 EIF3AQ14152 1382 aaKnown RBP20.78■□□□□ 0.92
PDAP1-204ENST00000496335 AFF2P51816 1311 aa20.78■□□□□ 0.92
PDAP1-204ENST00000496335 SPATA31A3Q5VYP0 1347 aa20.78■□□□□ 0.92
PDAP1-204ENST00000496335 PSME1Q06323 249 aa20.77■□□□□ 0.92
PDAP1-204ENST00000496335 ZNF772Q68DY9 489 aaPredicted RBP20.77■□□□□ 0.92
PDAP1-204ENST00000496335 CDK19Q9BWU1 502 aa20.77■□□□□ 0.92
PDAP1-204ENST00000496335 CENPJQ9HC77 1338 aaPredicted RBP20.76■□□□□ 0.91
PDAP1-204ENST00000496335 TONSLQ96HA7 1378 aa20.75■□□□□ 0.91
PDAP1-204ENST00000496335 NUDT16Q96DE0 195 aaKnown RBP20.75■□□□□ 0.91
PDAP1-204ENST00000496335 ROCK2O75116 1388 aaKnown RBP20.74■□□□□ 0.91
PDAP1-204ENST00000496335 NGLY1Q96IV0 654 aa20.74■□□□□ 0.91
PDAP1-204ENST00000496335 ATP7BP35670 1465 aa20.74■□□□□ 0.91
PDAP1-204ENST00000496335 LMOD2Q6P5Q4 547 aa20.73■□□□□ 0.91
PDAP1-204ENST00000496335 QRICH2Q9H0J4 1663 aa20.73■□□□□ 0.91
PDAP1-204ENST00000496335 TNS3Q68CZ2 1445 aa20.72■□□□□ 0.91
PDAP1-204ENST00000496335 PLEKHG5O94827 1062 aa20.72■□□□□ 0.91
PDAP1-204ENST00000496335 PCGF6Q9BYE7 350 aa20.72■□□□□ 0.91
PDAP1-204ENST00000496335 ITSN1Q15811 1721 aa20.72■□□□□ 0.91
PDAP1-204ENST00000496335 NGDNQ8NEJ9 315 aaKnown RBP20.71■□□□□ 0.91
PDAP1-204ENST00000496335 SBNO1A3KN83 1393 aa20.71■□□□□ 0.91
PDAP1-204ENST00000496335 GPRASP1Q5JY77 1395 aa20.7■□□□□ 0.9
PDAP1-204ENST00000496335 TRPM3Q9HCF6 1732 aaPredicted RBP20.7■□□□□ 0.9
PDAP1-204ENST00000496335 MARF1Q9Y4F3 1742 aaKnown RBP20.7■□□□□ 0.9
PDAP1-204ENST00000496335 CABLES1Q8TDN4 633 aa20.69■□□□□ 0.9
PDAP1-204ENST00000496335 TOPAZ1Q8N9V7 1692 aa20.67■□□□□ 0.9
PDAP1-204ENST00000496335 RXRBP28702 533 aa20.67■□□□□ 0.9
PDAP1-204ENST00000496335 SRPK2P78362 688 aaKnown RBP20.67■□□□□ 0.9
PDAP1-204ENST00000496335 QTRT2Q9H974 415 aaKnown RBP20.67■□□□□ 0.9
PDAP1-204ENST00000496335 CABP2Q9NPB3 220 aa20.67■□□□□ 0.9
PDAP1-204ENST00000496335 CCDC61Q9Y6R9 512 aa20.67■□□□□ 0.9
PDAP1-204ENST00000496335 ARHGEF10O15013 1369 aa20.66■□□□□ 0.9
PDAP1-204ENST00000496335 FNBP4Q8N3X1 1017 aaPredicted RBP20.65■□□□□ 0.9
PDAP1-204ENST00000496335 USP21Q9UK80 565 aa20.65■□□□□ 0.9
PDAP1-204ENST00000496335 ALS2Q96Q42 1657 aa20.64■□□□□ 0.9
PDAP1-204ENST00000496335 ACEP12821 1306 aa20.64■□□□□ 0.89
PDAP1-204ENST00000496335 PAK3O75914 559 aaPredicted RBP20.64■□□□□ 0.89
PDAP1-204ENST00000496335 HAP1P54257 671 aaPredicted RBP20.64■□□□□ 0.89
PDAP1-204ENST00000496335 CARD11Q9BXL7 1154 aa20.64■□□□□ 0.89
PDAP1-204ENST00000496335 PLEKHG3A1L390 1219 aa20.63■□□□□ 0.89
PDAP1-204ENST00000496335 ABCA3Q99758 1704 aa20.63■□□□□ 0.89
PDAP1-204ENST00000496335 RALGAPBQ86X10 1494 aa20.62■□□□□ 0.89
PDAP1-204ENST00000496335 POLR3AO14802 1390 aaPredicted RBP20.61■□□□□ 0.89
PDAP1-204ENST00000496335 PPIP5K1Q6PFW1 1433 aa20.61■□□□□ 0.89
PDAP1-204ENST00000496335 EVC2Q86UK5 1308 aa20.6■□□□□ 0.89
PDAP1-204ENST00000496335 RBM6P78332 1123 aaKnown RBP20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms