RNA–Protein interactions for RNA: ENST00000494532.1

UBE3C-207, Transcript of ubiquitin protein ligase E3C, humanhuman

TSL 2

Gene UBE3C, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-207ENST00000494532 KCNA6P17658 529 aa19.63■□□□□ 0.73
UBE3C-207ENST00000494532 POLR3GLQ9BT43 218 aa19.63■□□□□ 0.73
UBE3C-207ENST00000494532 MINK1Q8N4C8 1332 aaPredicted RBP19.62■□□□□ 0.73
UBE3C-207ENST00000494532 DMRT2Q9Y5R5 561 aa19.61■□□□□ 0.73
UBE3C-207ENST00000494532 CDCA8Q53HL2 280 aa19.6■□□□□ 0.73
UBE3C-207ENST00000494532 TULP4Q9NRJ4 1543 aa19.6■□□□□ 0.73
UBE3C-207ENST00000494532 EVC2Q86UK5 1308 aa19.59■□□□□ 0.73
UBE3C-207ENST00000494532 NKTRP30414 1462 aaKnown RBP19.59■□□□□ 0.73
UBE3C-207ENST00000494532 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.58■□□□□ 0.72
UBE3C-207ENST00000494532 STRCP1A6NGW2 1772 aa19.57■□□□□ 0.72
UBE3C-207ENST00000494532 ADGRB2O60241 1585 aa19.57■□□□□ 0.72
UBE3C-207ENST00000494532 DDX10Q13206 875 aaKnown RBP19.54■□□□□ 0.72
UBE3C-207ENST00000494532 PROSER2Q86WR7 435 aaPredicted RBP19.53■□□□□ 0.72
UBE3C-207ENST00000494532 NALCNQ8IZF0 1738 aa19.53■□□□□ 0.72
UBE3C-207ENST00000494532 SRPK2P78362 688 aaKnown RBP19.52■□□□□ 0.72
UBE3C-207ENST00000494532 CDK19Q9BWU1 502 aa19.52■□□□□ 0.72
UBE3C-207ENST00000494532 WASLO00401 505 aaPredicted RBP19.51■□□□□ 0.71
UBE3C-207ENST00000494532 PUS7Q96PZ0 661 aaKnown RBP19.51■□□□□ 0.71
UBE3C-207ENST00000494532 CABP2Q9NPB3 220 aa19.51■□□□□ 0.71
UBE3C-207ENST00000494532 ZNF335Q9H4Z2 1342 aaPredicted RBP19.51■□□□□ 0.71
UBE3C-207ENST00000494532 MYOM1P52179 1685 aa19.5■□□□□ 0.71
UBE3C-207ENST00000494532 ADGRL3Q9HAR2 1447 aa19.5■□□□□ 0.71
UBE3C-207ENST00000494532 ATAD2Q6PL18 1390 aa19.49■□□□□ 0.71
UBE3C-207ENST00000494532 C14orf37Q86TY3 774 aa19.49■□□□□ 0.71
UBE3C-207ENST00000494532 RBM33Q96EV2 1170 aaKnown RBP19.49■□□□□ 0.71
UBE3C-207ENST00000494532 CDC42BPGQ6DT37 1551 aa19.48■□□□□ 0.71
UBE3C-207ENST00000494532 DIEXFQ68CQ4 756 aaKnown RBP19.47■□□□□ 0.71
UBE3C-207ENST00000494532 TMEM94Q12767 1356 aa19.46■□□□□ 0.71
UBE3C-207ENST00000494532 FMN2Q9NZ56 1722 aa19.45■□□□□ 0.7
UBE3C-207ENST00000494532 NCOA3Q9Y6Q9 1424 aa19.45■□□□□ 0.7
UBE3C-207ENST00000494532 TMC1Q8TDI8 760 aa19.44■□□□□ 0.7
UBE3C-207ENST00000494532 LRRC7Q96NW7 1537 aa19.44■□□□□ 0.7
UBE3C-207ENST00000494532 NINLQ9Y2I6 1382 aa19.44■□□□□ 0.7
UBE3C-207ENST00000494532 XIRP1Q702N8 1843 aaKnown RBP19.43■□□□□ 0.7
UBE3C-207ENST00000494532 ATP7BP35670 1465 aa19.42■□□□□ 0.7
UBE3C-207ENST00000494532 NUDT16Q96DE0 195 aaKnown RBP19.42■□□□□ 0.7
UBE3C-207ENST00000494532 TOPAZ1Q8N9V7 1692 aa19.41■□□□□ 0.7
UBE3C-207ENST00000494532 ITSN1Q15811 1721 aa19.41■□□□□ 0.7
UBE3C-207ENST00000494532 USP32Q8NFA0 1604 aa19.4■□□□□ 0.7
UBE3C-207ENST00000494532 NUTM2FA1L443 756 aa19.4■□□□□ 0.7
UBE3C-207ENST00000494532 SLC12A5Q9H2X9 1139 aa19.4■□□□□ 0.7
UBE3C-207ENST00000494532 C19orf44Q9H6X5 657 aa19.4■□□□□ 0.7
UBE3C-207ENST00000494532 PANK3Q9H999 370 aa19.4■□□□□ 0.7
UBE3C-207ENST00000494532 PRR36Q9H6K5 1346 aa19.4■□□□□ 0.7
UBE3C-207ENST00000494532 PPIP5K1Q6PFW1 1433 aa19.4■□□□□ 0.7
UBE3C-207ENST00000494532 ANKARQ7Z5J8 1434 aa19.4■□□□□ 0.7
UBE3C-207ENST00000494532 MSH6P52701 1360 aa19.39■□□□□ 0.69
UBE3C-207ENST00000494532 RGPD8O14715 1765 aaPredicted RBP19.38■□□□□ 0.69
UBE3C-207ENST00000494532 DCCP43146 1447 aa19.38■□□□□ 0.69
UBE3C-207ENST00000494532 CCDC61Q9Y6R9 512 aa19.38■□□□□ 0.69
UBE3C-207ENST00000494532 LTBP4Q8N2S1 1624 aa19.37■□□□□ 0.69
UBE3C-207ENST00000494532 ANKRD36BQ8N2N9 1353 aa19.36■□□□□ 0.69
UBE3C-207ENST00000494532 ATF3P18847 181 aa19.36■□□□□ 0.69
UBE3C-207ENST00000494532 CABP1Q9NZU7 370 aa19.36■□□□□ 0.69
UBE3C-207ENST00000494532 TERF2IPQ9NYB0 399 aa19.35■□□□□ 0.69
UBE3C-207ENST00000494532 HDGFL2Q7Z4V5 671 aaPredicted RBP19.34■□□□□ 0.69
UBE3C-207ENST00000494532 CADPS2Q86UW7 1296 aa19.33■□□□□ 0.68
UBE3C-207ENST00000494532 CD163L1Q9NR16 1453 aa19.33■□□□□ 0.68
UBE3C-207ENST00000494532 A0A1W2PP64 1363 aa19.32■□□□□ 0.68
UBE3C-207ENST00000494532 AKAP12Q02952 1782 aa19.32■□□□□ 0.68
UBE3C-207ENST00000494532 PLEKHG3A1L390 1219 aa19.31■□□□□ 0.68
UBE3C-207ENST00000494532 PER1O15534 1290 aaPredicted RBP19.31■□□□□ 0.68
UBE3C-207ENST00000494532 KNSTRNQ9Y448 316 aa19.31■□□□□ 0.68
UBE3C-207ENST00000494532 MST1RQ04912 1400 aa19.31■□□□□ 0.68
UBE3C-207ENST00000494532 NSD3Q9BZ95 1437 aa19.31■□□□□ 0.68
UBE3C-207ENST00000494532 C1orf167Q5SNV9 1468 aa19.3■□□□□ 0.68
UBE3C-207ENST00000494532 MON2Q7Z3U7 1717 aa19.29■□□□□ 0.68
UBE3C-207ENST00000494532 CPSF1Q10570 1443 aaKnown RBP19.29■□□□□ 0.68
UBE3C-207ENST00000494532 ANP32CO43423 234 aa19.29■□□□□ 0.68
UBE3C-207ENST00000494532 CARD14Q9BXL6 1004 aa19.29■□□□□ 0.68
UBE3C-207ENST00000494532 PMFBP1Q8TBY8 1022 aa19.28■□□□□ 0.68
UBE3C-207ENST00000494532 PHF8Q9UPP1 1060 aa19.28■□□□□ 0.68
UBE3C-207ENST00000494532 KTN1Q86UP2 1357 aaKnown RBP19.28■□□□□ 0.68
UBE3C-207ENST00000494532 ACEP12821 1306 aa19.27■□□□□ 0.68
UBE3C-207ENST00000494532 KIF1AQ12756 1690 aa19.27■□□□□ 0.68
UBE3C-207ENST00000494532 ESCO1Q5FWF5 840 aa19.27■□□□□ 0.68
UBE3C-207ENST00000494532 NGDNQ8NEJ9 315 aaKnown RBP19.27■□□□□ 0.68
UBE3C-207ENST00000494532 ZNF692Q9BU19 519 aaPredicted RBP19.26■□□□□ 0.67
UBE3C-207ENST00000494532 POLR3AO14802 1390 aaPredicted RBP19.26■□□□□ 0.67
UBE3C-207ENST00000494532 CNGB1Q14028 1251 aaPredicted RBP19.25■□□□□ 0.67
UBE3C-207ENST00000494532 EDC4Q6P2E9 1401 aaKnown RBP19.25■□□□□ 0.67
UBE3C-207ENST00000494532 AMER1Q5JTC6 1135 aaPredicted RBP19.24■□□□□ 0.67
UBE3C-207ENST00000494532 NRKQ7Z2Y5 1582 aa19.23■□□□□ 0.67
UBE3C-207ENST00000494532 KIF20BQ96Q89 1820 aa19.23■□□□□ 0.67
UBE3C-207ENST00000494532 CC2D1BQ5T0F9 858 aaKnown RBP19.23■□□□□ 0.67
UBE3C-207ENST00000494532 ORAI2Q96SN7 254 aa19.23■□□□□ 0.67
UBE3C-207ENST00000494532 USP6P35125 1406 aa19.23■□□□□ 0.67
UBE3C-207ENST00000494532 CGNL1Q0VF96 1302 aa19.23■□□□□ 0.67
UBE3C-207ENST00000494532 NPC1L1Q9UHC9 1359 aa19.22■□□□□ 0.67
UBE3C-207ENST00000494532 MIER1Q8N108 512 aa19.22■□□□□ 0.67
UBE3C-207ENST00000494532 PRKRIP1Q9H875 184 aaPredicted RBP19.21■□□□□ 0.67
UBE3C-207ENST00000494532 SLAIN2Q9P270 581 aa19.2■□□□□ 0.66
UBE3C-207ENST00000494532 NSD2O96028 1365 aa19.19■□□□□ 0.66
UBE3C-207ENST00000494532 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.19■□□□□ 0.66
UBE3C-207ENST00000494532 ANKRD26Q9UPS8 1709 aa19.18■□□□□ 0.66
UBE3C-207ENST00000494532 RALBP1Q15311 655 aa19.18■□□□□ 0.66
UBE3C-207ENST00000494532 TTC21BQ7Z4L5 1316 aa19.18■□□□□ 0.66
UBE3C-207ENST00000494532 PARD3Q8TEW0 1356 aa19.18■□□□□ 0.66
UBE3C-207ENST00000494532 SSH2Q76I76 1423 aa19.17■□□□□ 0.66
UBE3C-207ENST00000494532 PSME1Q06323 249 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms