RNA–Protein interactions for RNA: ENST00000494511.5

PMP22-206, Transcript of peripheral myelin protein 22, humanhuman

TSL 1 (best) BASIC

Gene PMP22, Length 872 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMP22-206ENST00000494511 PLEKHH1Q9ULM0 1364 aa21.09■□□□□ 0.97
PMP22-206ENST00000494511 KNDC1Q76NI1 1749 aa21.08■□□□□ 0.97
PMP22-206ENST00000494511 SPATA31A6Q5VVP1 1343 aa21.07■□□□□ 0.96
PMP22-206ENST00000494511 ORAI2Q96SN7 254 aa21.07■□□□□ 0.96
PMP22-206ENST00000494511 LAMC1P11047 1609 aa21.07■□□□□ 0.96
PMP22-206ENST00000494511 NHSL1Q5SYE7 1610 aa21.07■□□□□ 0.96
PMP22-206ENST00000494511 DHX57Q6P158 1386 aaKnown RBP21.06■□□□□ 0.96
PMP22-206ENST00000494511 NUTM2FA1L443 756 aa21.05■□□□□ 0.96
PMP22-206ENST00000494511 CDC42BPGQ6DT37 1551 aa21.04■□□□□ 0.96
PMP22-206ENST00000494511 SAFB2Q14151 953 aaKnown RBP eCLIP21.03■□□□□ 0.96
PMP22-206ENST00000494511 NUTM2BA6NNL0 878 aaPredicted RBP21.01■□□□□ 0.95
PMP22-206ENST00000494511 NUTM2EB1AL46 878 aaPredicted RBP21.01■□□□□ 0.95
PMP22-206ENST00000494511 ESCO1Q5FWF5 840 aa21.01■□□□□ 0.95
PMP22-206ENST00000494511 NUTM2AQ8IVF1 878 aaPredicted RBP21.01■□□□□ 0.95
PMP22-206ENST00000494511 MEX3CQ5U5Q3 659 aaKnown RBP21■□□□□ 0.95
PMP22-206ENST00000494511 LRRC59Q96AG4 307 aaKnown RBP21■□□□□ 0.95
PMP22-206ENST00000494511 PRAM1Q96QH2 718 aa21■□□□□ 0.95
PMP22-206ENST00000494511 ZNF772Q68DY9 489 aaPredicted RBP20.99■□□□□ 0.95
PMP22-206ENST00000494511 SIRT1Q96EB6 747 aa20.99■□□□□ 0.95
PMP22-206ENST00000494511 TRAK1Q9UPV9 953 aa20.99■□□□□ 0.95
PMP22-206ENST00000494511 ADGRB1O14514 1584 aa20.98■□□□□ 0.95
PMP22-206ENST00000494511 POGKQ9P215 609 aa20.98■□□□□ 0.95
PMP22-206ENST00000494511 STAC3Q96MF2 364 aa20.97■□□□□ 0.95
PMP22-206ENST00000494511 FMN2Q9NZ56 1722 aa20.95■□□□□ 0.94
PMP22-206ENST00000494511 PNPLA6Q8IY17 1366 aa20.95■□□□□ 0.94
PMP22-206ENST00000494511 XPCQ01831 940 aaPredicted RBP20.94■□□□□ 0.94
PMP22-206ENST00000494511 UPF1Q92900 1129 aaKnown RBP eCLIP20.94■□□□□ 0.94
PMP22-206ENST00000494511 SOS2Q07890 1332 aaPredicted RBP20.94■□□□□ 0.94
PMP22-206ENST00000494511 DLC1Q96QB1 1528 aa20.94■□□□□ 0.94
PMP22-206ENST00000494511 FOXO3O43524 673 aa20.93■□□□□ 0.94
PMP22-206ENST00000494511 SIN3AQ96ST3 1273 aa20.92■□□□□ 0.94
PMP22-206ENST00000494511 CDK12Q9NYV4 1490 aaPredicted RBP20.92■□□□□ 0.94
PMP22-206ENST00000494511 RGPD8O14715 1765 aaPredicted RBP20.92■□□□□ 0.94
PMP22-206ENST00000494511 NPHP3Q7Z494 1330 aa20.91■□□□□ 0.94
PMP22-206ENST00000494511 HIRIP3Q9BW71 556 aaPredicted RBP20.91■□□□□ 0.94
PMP22-206ENST00000494511 MINK1Q8N4C8 1332 aaPredicted RBP20.9■□□□□ 0.94
PMP22-206ENST00000494511 RXRBP28702 533 aa20.89■□□□□ 0.93
PMP22-206ENST00000494511 NEUROD1Q13562 356 aa20.89■□□□□ 0.93
PMP22-206ENST00000494511 PXDNQ92626 1479 aa20.88■□□□□ 0.93
PMP22-206ENST00000494511 ADAMTS2O95450 1211 aa20.86■□□□□ 0.93
PMP22-206ENST00000494511 C8orf37Q96NL8 207 aa20.86■□□□□ 0.93
PMP22-206ENST00000494511 AFF2P51816 1311 aa20.85■□□□□ 0.93
PMP22-206ENST00000494511 ARHGEF28Q8N1W1 1705 aaKnown RBP20.85■□□□□ 0.93
PMP22-206ENST00000494511 TRIM26Q12899 539 aaPredicted RBP20.85■□□□□ 0.93
PMP22-206ENST00000494511 NBPF1Q3BBV0 1214 aa20.85■□□□□ 0.93
PMP22-206ENST00000494511 L3MBTL2Q969R5 705 aa20.85■□□□□ 0.93
PMP22-206ENST00000494511 PHF8Q9UPP1 1060 aa20.85■□□□□ 0.93
PMP22-206ENST00000494511 KIF1AQ12756 1690 aa20.85■□□□□ 0.93
PMP22-206ENST00000494511 ADGRB2O60241 1585 aa20.84■□□□□ 0.93
PMP22-206ENST00000494511 KIAA1210Q9ULL0 1709 aa20.84■□□□□ 0.93
PMP22-206ENST00000494511 KRT28Q7Z3Y7 464 aa20.83■□□□□ 0.93
PMP22-206ENST00000494511 USP32Q8NFA0 1604 aa20.82■□□□□ 0.92
PMP22-206ENST00000494511 PMFBP1Q8TBY8 1022 aa20.82■□□□□ 0.92
PMP22-206ENST00000494511 COL22A1Q8NFW1 1626 aaPredicted RBP20.8■□□□□ 0.92
PMP22-206ENST00000494511 WASLO00401 505 aaPredicted RBP20.8■□□□□ 0.92
PMP22-206ENST00000494511 NGLY1Q96IV0 654 aa20.8■□□□□ 0.92
PMP22-206ENST00000494511 RGS12O14924 1447 aa20.79■□□□□ 0.92
PMP22-206ENST00000494511 ANKARQ7Z5J8 1434 aa20.79■□□□□ 0.92
PMP22-206ENST00000494511 PRR36Q9H6K5 1346 aa20.78■□□□□ 0.92
PMP22-206ENST00000494511 PLEKHG5O94827 1062 aa20.78■□□□□ 0.92
PMP22-206ENST00000494511 PSME1Q06323 249 aa20.78■□□□□ 0.92
PMP22-206ENST00000494511 SPATA31A3Q5VYP0 1347 aa20.78■□□□□ 0.92
PMP22-206ENST00000494511 EIF3AQ14152 1382 aaKnown RBP20.76■□□□□ 0.91
PMP22-206ENST00000494511 LMOD2Q6P5Q4 547 aa20.76■□□□□ 0.91
PMP22-206ENST00000494511 TULP4Q9NRJ4 1543 aa20.76■□□□□ 0.91
PMP22-206ENST00000494511 RBM6P78332 1123 aaKnown RBP20.75■□□□□ 0.91
PMP22-206ENST00000494511 QTRT2Q9H974 415 aaKnown RBP20.74■□□□□ 0.91
PMP22-206ENST00000494511 TNS3Q68CZ2 1445 aa20.73■□□□□ 0.91
PMP22-206ENST00000494511 CDK19Q9BWU1 502 aa20.73■□□□□ 0.91
PMP22-206ENST00000494511 NUDT16Q96DE0 195 aaKnown RBP20.72■□□□□ 0.91
PMP22-206ENST00000494511 NGDNQ8NEJ9 315 aaKnown RBP20.71■□□□□ 0.91
PMP22-206ENST00000494511 CABLES1Q8TDN4 633 aa20.71■□□□□ 0.91
PMP22-206ENST00000494511 USP21Q9UK80 565 aa20.71■□□□□ 0.91
PMP22-206ENST00000494511 TRPM1Q7Z4N2 1603 aa20.71■□□□□ 0.91
PMP22-206ENST00000494511 MARF1Q9Y4F3 1742 aaKnown RBP20.7■□□□□ 0.9
PMP22-206ENST00000494511 CENPJQ9HC77 1338 aaPredicted RBP20.7■□□□□ 0.9
PMP22-206ENST00000494511 SBNO1A3KN83 1393 aa20.7■□□□□ 0.9
PMP22-206ENST00000494511 ATP7BP35670 1465 aa20.69■□□□□ 0.9
PMP22-206ENST00000494511 HAP1P54257 671 aaPredicted RBP20.69■□□□□ 0.9
PMP22-206ENST00000494511 GPRASP1Q5JY77 1395 aa20.69■□□□□ 0.9
PMP22-206ENST00000494511 ITSN1Q15811 1721 aa20.68■□□□□ 0.9
PMP22-206ENST00000494511 FNBP4Q8N3X1 1017 aaPredicted RBP20.68■□□□□ 0.9
PMP22-206ENST00000494511 NBPF8Q3BBV2 869 aa20.67■□□□□ 0.9
PMP22-206ENST00000494511 ROCK2O75116 1388 aaKnown RBP20.67■□□□□ 0.9
PMP22-206ENST00000494511 QRICH2Q9H0J4 1663 aa20.67■□□□□ 0.9
PMP22-206ENST00000494511 TRPM3Q9HCF6 1732 aaPredicted RBP20.67■□□□□ 0.9
PMP22-206ENST00000494511 PAK3O75914 559 aaPredicted RBP20.66■□□□□ 0.9
PMP22-206ENST00000494511 ARHGEF10O15013 1369 aa20.66■□□□□ 0.9
PMP22-206ENST00000494511 TONSLQ96HA7 1378 aa20.65■□□□□ 0.9
PMP22-206ENST00000494511 SRPK2P78362 688 aaKnown RBP20.65■□□□□ 0.9
PMP22-206ENST00000494511 CABP2Q9NPB3 220 aa20.64■□□□□ 0.89
PMP22-206ENST00000494511 TRPC5Q9UL62 973 aaPredicted RBP20.64■□□□□ 0.89
PMP22-206ENST00000494511 ATAD2Q6PL18 1390 aa20.63■□□□□ 0.89
PMP22-206ENST00000494511 CCDC61Q9Y6R9 512 aa20.63■□□□□ 0.89
PMP22-206ENST00000494511 ABCA3Q99758 1704 aa20.62■□□□□ 0.89
PMP22-206ENST00000494511 EP400Q96L91 3159 aa20.62■□□□□ 0.89
PMP22-206ENST00000494511 TOPAZ1Q8N9V7 1692 aa20.62■□□□□ 0.89
PMP22-206ENST00000494511 ALS2Q96Q42 1657 aa20.62■□□□□ 0.89
PMP22-206ENST00000494511 BCL9LQ86UU0 1499 aa20.62■□□□□ 0.89
PMP22-206ENST00000494511 ATRNO75882 1429 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms