RNA–Protein interactions for RNA: ENST00000494327.1

HPS3-207, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 3

Gene HPS3, Length 556 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-207ENST00000494327 KNDC1Q76NI1 1749 aa31.71■■■□□ 2.67
HPS3-207ENST00000494327 DDX17Q92841 729 aaKnown RBP31.7■■■□□ 2.67
HPS3-207ENST00000494327 ORAI2Q96SN7 254 aa31.7■■■□□ 2.67
HPS3-207ENST00000494327 PHF23Q9BUL5 403 aaPredicted RBP31.7■■■□□ 2.67
HPS3-207ENST00000494327 NUTM2FA1L443 756 aa31.69■■■□□ 2.66
HPS3-207ENST00000494327 POGKQ9P215 609 aa31.69■■■□□ 2.66
HPS3-207ENST00000494327 JCADQ9P266 1359 aa31.68■■■□□ 2.66
HPS3-207ENST00000494327 AHDC1Q5TGY3 1603 aaPredicted RBP31.67■■■□□ 2.66
HPS3-207ENST00000494327 ADGRB1O14514 1584 aa31.67■■■□□ 2.66
HPS3-207ENST00000494327 COL16A1Q07092 1604 aaPredicted RBP31.66■■■□□ 2.66
HPS3-207ENST00000494327 ILDR2Q71H61 639 aa31.65■■■□□ 2.66
HPS3-207ENST00000494327 ESCO1Q5FWF5 840 aa31.64■■■□□ 2.66
HPS3-207ENST00000494327 L3MBTL2Q969R5 705 aa31.64■■■□□ 2.66
HPS3-207ENST00000494327 CDC42BPGQ6DT37 1551 aa31.64■■■□□ 2.65
HPS3-207ENST00000494327 DLC1Q96QB1 1528 aa31.59■■■□□ 2.65
HPS3-207ENST00000494327 LRRC59Q96AG4 307 aaKnown RBP31.58■■■□□ 2.65
HPS3-207ENST00000494327 NBPF1Q3BBV0 1214 aa31.56■■■□□ 2.64
HPS3-207ENST00000494327 HIRIP3Q9BW71 556 aaPredicted RBP31.56■■■□□ 2.64
HPS3-207ENST00000494327 NHSL1Q5SYE7 1610 aa31.56■■■□□ 2.64
HPS3-207ENST00000494327 MINK1Q8N4C8 1332 aaPredicted RBP31.54■■■□□ 2.64
HPS3-207ENST00000494327 SPATA31A6Q5VVP1 1343 aa31.53■■■□□ 2.64
HPS3-207ENST00000494327 FOXO3O43524 673 aa31.52■■■□□ 2.64
HPS3-207ENST00000494327 NUTM2BA6NNL0 878 aaPredicted RBP31.51■■■□□ 2.63
HPS3-207ENST00000494327 NUTM2EB1AL46 878 aaPredicted RBP31.51■■■□□ 2.63
HPS3-207ENST00000494327 NUTM2AQ8IVF1 878 aaPredicted RBP31.51■■■□□ 2.63
HPS3-207ENST00000494327 MEX3CQ5U5Q3 659 aaKnown RBP31.49■■■□□ 2.63
HPS3-207ENST00000494327 FMN2Q9NZ56 1722 aa31.49■■■□□ 2.63
HPS3-207ENST00000494327 SOS2Q07890 1332 aaPredicted RBP31.49■■■□□ 2.63
HPS3-207ENST00000494327 NPHP3Q7Z494 1330 aa31.49■■■□□ 2.63
HPS3-207ENST00000494327 XPCQ01831 940 aaPredicted RBP31.48■■■□□ 2.63
HPS3-207ENST00000494327 RGS17Q9UGC6 210 aaPredicted RBP31.46■■■□□ 2.63
HPS3-207ENST00000494327 KIAA1210Q9ULL0 1709 aa31.46■■■□□ 2.63
HPS3-207ENST00000494327 SHPRHQ149N8 1683 aa31.45■■■□□ 2.63
HPS3-207ENST00000494327 PCGF6Q9BYE7 350 aa31.45■■■□□ 2.63
HPS3-207ENST00000494327 PNPLA6Q8IY17 1366 aa31.43■■■□□ 2.62
HPS3-207ENST00000494327 LRP6O75581 1613 aa31.43■■■□□ 2.62
HPS3-207ENST00000494327 PHF8Q9UPP1 1060 aa31.43■■■□□ 2.62
HPS3-207ENST00000494327 WASLO00401 505 aaPredicted RBP31.42■■■□□ 2.62
HPS3-207ENST00000494327 ARHGEF28Q8N1W1 1705 aaKnown RBP31.4■■■□□ 2.62
HPS3-207ENST00000494327 TONSLQ96HA7 1378 aa31.4■■■□□ 2.62
HPS3-207ENST00000494327 ADGRB2O60241 1585 aa31.39■■■□□ 2.61
HPS3-207ENST00000494327 PMFBP1Q8TBY8 1022 aa31.38■■■□□ 2.61
HPS3-207ENST00000494327 KRT28Q7Z3Y7 464 aa31.37■■■□□ 2.61
HPS3-207ENST00000494327 PXDNQ92626 1479 aa31.36■■■□□ 2.61
HPS3-207ENST00000494327 ANKARQ7Z5J8 1434 aa31.36■■■□□ 2.61
HPS3-207ENST00000494327 NBPF8Q3BBV2 869 aa31.36■■■□□ 2.61
HPS3-207ENST00000494327 EIF3AQ14152 1382 aaKnown RBP31.35■■■□□ 2.61
HPS3-207ENST00000494327 RGPD8O14715 1765 aaPredicted RBP31.35■■■□□ 2.61
HPS3-207ENST00000494327 ROCK2O75116 1388 aaKnown RBP31.34■■■□□ 2.61
HPS3-207ENST00000494327 PRR36Q9H6K5 1346 aa31.34■■■□□ 2.61
HPS3-207ENST00000494327 KIF1AQ12756 1690 aa31.33■■■□□ 2.61
HPS3-207ENST00000494327 POTEAQ6S8J7 498 aa31.33■■■□□ 2.61
HPS3-207ENST00000494327 CENPJQ9HC77 1338 aaPredicted RBP31.32■■■□□ 2.6
HPS3-207ENST00000494327 PSME1Q06323 249 aa31.32■■■□□ 2.6
HPS3-207ENST00000494327 CDK19Q9BWU1 502 aa31.32■■■□□ 2.6
HPS3-207ENST00000494327 ADAMTS2O95450 1211 aa31.31■■■□□ 2.6
HPS3-207ENST00000494327 USP32Q8NFA0 1604 aa31.31■■■□□ 2.6
HPS3-207ENST00000494327 TULP4Q9NRJ4 1543 aa31.3■■■□□ 2.6
HPS3-207ENST00000494327 TRPM1Q7Z4N2 1603 aa31.3■■■□□ 2.6
HPS3-207ENST00000494327 NUDT16Q96DE0 195 aaKnown RBP31.29■■■□□ 2.6
HPS3-207ENST00000494327 SOCS7O14512 581 aa31.28■■■□□ 2.6
HPS3-207ENST00000494327 C8orf37Q96NL8 207 aa31.28■■■□□ 2.6
HPS3-207ENST00000494327 SPATA31A3Q5VYP0 1347 aa31.26■■■□□ 2.6
HPS3-207ENST00000494327 ZNF772Q68DY9 489 aaPredicted RBP31.25■■■□□ 2.59
HPS3-207ENST00000494327 LMOD2Q6P5Q4 547 aa31.25■■■□□ 2.59
HPS3-207ENST00000494327 NGDNQ8NEJ9 315 aaKnown RBP31.24■■■□□ 2.59
HPS3-207ENST00000494327 PLEKHG5O94827 1062 aa31.23■■■□□ 2.59
HPS3-207ENST00000494327 AFF2P51816 1311 aa31.23■■■□□ 2.59
HPS3-207ENST00000494327 SRPK2P78362 688 aaKnown RBP31.22■■■□□ 2.59
HPS3-207ENST00000494327 NGLY1Q96IV0 654 aa31.22■■■□□ 2.59
HPS3-207ENST00000494327 GPRASP1Q5JY77 1395 aa31.2■■■□□ 2.59
HPS3-207ENST00000494327 CARD11Q9BXL7 1154 aa31.2■■■□□ 2.59
HPS3-207ENST00000494327 ATP7BP35670 1465 aa31.2■■■□□ 2.58
HPS3-207ENST00000494327 CABP2Q9NPB3 220 aa31.19■■■□□ 2.58
HPS3-207ENST00000494327 SBNO1A3KN83 1393 aa31.18■■■□□ 2.58
HPS3-207ENST00000494327 TNS3Q68CZ2 1445 aa31.18■■■□□ 2.58
HPS3-207ENST00000494327 COL22A1Q8NFW1 1626 aaPredicted RBP31.18■■■□□ 2.58
HPS3-207ENST00000494327 CCDC61Q9Y6R9 512 aa31.18■■■□□ 2.58
HPS3-207ENST00000494327 PAK3O75914 559 aaPredicted RBP31.15■■■□□ 2.58
HPS3-207ENST00000494327 HAP1P54257 671 aaPredicted RBP31.15■■■□□ 2.58
HPS3-207ENST00000494327 QRICH2Q9H0J4 1663 aa31.15■■■□□ 2.58
HPS3-207ENST00000494327 CABLES1Q8TDN4 633 aa31.14■■■□□ 2.58
HPS3-207ENST00000494327 ARHGEF10O15013 1369 aa31.11■■■□□ 2.57
HPS3-207ENST00000494327 ACEP12821 1306 aa31.11■■■□□ 2.57
HPS3-207ENST00000494327 EVC2Q86UK5 1308 aa31.11■■■□□ 2.57
HPS3-207ENST00000494327 RALGAPBQ86X10 1494 aa31.11■■■□□ 2.57
HPS3-207ENST00000494327 ITSN1Q15811 1721 aa31.1■■■□□ 2.57
HPS3-207ENST00000494327 PLEKHG3A1L390 1219 aa31.09■■■□□ 2.57
HPS3-207ENST00000494327 QTRT2Q9H974 415 aaKnown RBP31.09■■■□□ 2.57
HPS3-207ENST00000494327 USP21Q9UK80 565 aa31.09■■■□□ 2.57
HPS3-207ENST00000494327 RXRBP28702 533 aa31.08■■■□□ 2.57
HPS3-207ENST00000494327 CCER1Q8TC90 406 aaPredicted RBP31.07■■■□□ 2.56
HPS3-207ENST00000494327 PPIP5K1Q6PFW1 1433 aa31.07■■■□□ 2.56
HPS3-207ENST00000494327 CLSPNQ9HAW4 1339 aa31.06■■■□□ 2.56
HPS3-207ENST00000494327 FNBP4Q8N3X1 1017 aaPredicted RBP31.05■■■□□ 2.56
HPS3-207ENST00000494327 CABP1Q9NZU7 370 aa31.04■■■□□ 2.56
HPS3-207ENST00000494327 TRPM3Q9HCF6 1732 aaPredicted RBP31.04■■■□□ 2.56
HPS3-207ENST00000494327 POLR3AO14802 1390 aaPredicted RBP31.04■■■□□ 2.56
HPS3-207ENST00000494327 TOPAZ1Q8N9V7 1692 aa31.03■■■□□ 2.56
HPS3-207ENST00000494327 NUTM2GQ5VZR2 741 aa30.99■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms