RNA–Protein interactions for RNA: ENST00000493952.2

SATB1-217, Transcript of SATB homeobox 1, humanhuman

TSL 3 BASIC

Gene SATB1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-217ENST00000493952 RGPD8O14715 1765 aaPredicted RBP23.43■■□□□ 1.34
SATB1-217ENST00000493952 WAPLQ7Z5K2 1190 aa23.43■■□□□ 1.34
SATB1-217ENST00000493952 MED1Q15648 1581 aaPredicted RBP23.41■■□□□ 1.34
SATB1-217ENST00000493952 NEUROD1Q13562 356 aa23.4■■□□□ 1.34
SATB1-217ENST00000493952 TRPM1Q7Z4N2 1603 aa23.4■■□□□ 1.34
SATB1-217ENST00000493952 C1orf167Q5SNV9 1468 aa23.38■■□□□ 1.33
SATB1-217ENST00000493952 BRINP3Q76B58 766 aa23.38■■□□□ 1.33
SATB1-217ENST00000493952 L3MBTL2Q969R5 705 aa23.38■■□□□ 1.33
SATB1-217ENST00000493952 SIRT1Q96EB6 747 aa23.38■■□□□ 1.33
SATB1-217ENST00000493952 ADGRB2O60241 1585 aa23.37■■□□□ 1.33
SATB1-217ENST00000493952 SHPRHQ149N8 1683 aa23.35■■□□□ 1.33
SATB1-217ENST00000493952 PRAM1Q96QH2 718 aa23.34■■□□□ 1.33
SATB1-217ENST00000493952 TRAK1Q9UPV9 953 aa23.34■■□□□ 1.33
SATB1-217ENST00000493952 PCGF6Q9BYE7 350 aa23.33■■□□□ 1.33
SATB1-217ENST00000493952 USP32Q8NFA0 1604 aa23.31■■□□□ 1.32
SATB1-217ENST00000493952 SAFB2Q14151 953 aaKnown RBP eCLIP23.31■■□□□ 1.32
SATB1-217ENST00000493952 DISP3Q9P2K9 1392 aa23.3■■□□□ 1.32
SATB1-217ENST00000493952 KIF1AQ12756 1690 aa23.3■■□□□ 1.32
SATB1-217ENST00000493952 POGKQ9P215 609 aa23.3■■□□□ 1.32
SATB1-217ENST00000493952 NBPF1Q3BBV0 1214 aa23.29■■□□□ 1.32
SATB1-217ENST00000493952 ORAI2Q96SN7 254 aa23.29■■□□□ 1.32
SATB1-217ENST00000493952 QRICH2Q9H0J4 1663 aa23.27■■□□□ 1.32
SATB1-217ENST00000493952 JCADQ9P266 1359 aa23.27■■□□□ 1.31
SATB1-217ENST00000493952 NUTM2FA1L443 756 aa23.26■■□□□ 1.31
SATB1-217ENST00000493952 DDX17Q92841 729 aaKnown RBP23.26■■□□□ 1.31
SATB1-217ENST00000493952 TONSLQ96HA7 1378 aa23.25■■□□□ 1.31
SATB1-217ENST00000493952 ITSN1Q15811 1721 aa23.24■■□□□ 1.31
SATB1-217ENST00000493952 MINK1Q8N4C8 1332 aaPredicted RBP23.23■■□□□ 1.31
SATB1-217ENST00000493952 ESCO1Q5FWF5 840 aa23.22■■□□□ 1.31
SATB1-217ENST00000493952 HIRIP3Q9BW71 556 aaPredicted RBP23.21■■□□□ 1.31
SATB1-217ENST00000493952 TULP4Q9NRJ4 1543 aa23.2■■□□□ 1.3
SATB1-217ENST00000493952 PXDNQ92626 1479 aa23.19■■□□□ 1.3
SATB1-217ENST00000493952 NBPF8Q3BBV2 869 aa23.19■■□□□ 1.3
SATB1-217ENST00000493952 ANKARQ7Z5J8 1434 aa23.18■■□□□ 1.3
SATB1-217ENST00000493952 TOPAZ1Q8N9V7 1692 aa23.18■■□□□ 1.3
SATB1-217ENST00000493952 LRP6O75581 1613 aa23.18■■□□□ 1.3
SATB1-217ENST00000493952 SOS2Q07890 1332 aaPredicted RBP23.17■■□□□ 1.3
SATB1-217ENST00000493952 ROCK2O75116 1388 aaKnown RBP23.16■■□□□ 1.3
SATB1-217ENST00000493952 COL22A1Q8NFW1 1626 aaPredicted RBP23.16■■□□□ 1.3
SATB1-217ENST00000493952 LRRC59Q96AG4 307 aaKnown RBP23.15■■□□□ 1.3
SATB1-217ENST00000493952 RALGAPBQ86X10 1494 aa23.15■■□□□ 1.3
SATB1-217ENST00000493952 EIF3AQ14152 1382 aaKnown RBP23.14■■□□□ 1.3
SATB1-217ENST00000493952 SPATA31A6Q5VVP1 1343 aa23.14■■□□□ 1.3
SATB1-217ENST00000493952 NPHP3Q7Z494 1330 aa23.14■■□□□ 1.3
SATB1-217ENST00000493952 WASLO00401 505 aaPredicted RBP23.14■■□□□ 1.29
SATB1-217ENST00000493952 PNPLA6Q8IY17 1366 aa23.14■■□□□ 1.29
SATB1-217ENST00000493952 ATP7BP35670 1465 aa23.13■■□□□ 1.29
SATB1-217ENST00000493952 FOXO3O43524 673 aa23.13■■□□□ 1.29
SATB1-217ENST00000493952 GPRASP1Q5JY77 1395 aa23.13■■□□□ 1.29
SATB1-217ENST00000493952 PRR36Q9H6K5 1346 aa23.12■■□□□ 1.29
SATB1-217ENST00000493952 PHF23Q9BUL5 403 aaPredicted RBP23.12■■□□□ 1.29
SATB1-217ENST00000493952 CENPJQ9HC77 1338 aaPredicted RBP23.11■■□□□ 1.29
SATB1-217ENST00000493952 TRPM3Q9HCF6 1732 aaPredicted RBP23.11■■□□□ 1.29
SATB1-217ENST00000493952 MARF1Q9Y4F3 1742 aaKnown RBP23.11■■□□□ 1.29
SATB1-217ENST00000493952 XPCQ01831 940 aaPredicted RBP23.11■■□□□ 1.29
SATB1-217ENST00000493952 PHF8Q9UPP1 1060 aa23.11■■□□□ 1.29
SATB1-217ENST00000493952 CLSPNQ9HAW4 1339 aa23.09■■□□□ 1.29
SATB1-217ENST00000493952 ABCA3Q99758 1704 aa23.08■■□□□ 1.28
SATB1-217ENST00000493952 ILDR2Q71H61 639 aa23.07■■□□□ 1.28
SATB1-217ENST00000493952 PMFBP1Q8TBY8 1022 aa23.06■■□□□ 1.28
SATB1-217ENST00000493952 CDK19Q9BWU1 502 aa23.06■■□□□ 1.28
SATB1-217ENST00000493952 ALS2Q96Q42 1657 aa23.06■■□□□ 1.28
SATB1-217ENST00000493952 NUTM2BA6NNL0 878 aaPredicted RBP23.05■■□□□ 1.28
SATB1-217ENST00000493952 NUTM2EB1AL46 878 aaPredicted RBP23.05■■□□□ 1.28
SATB1-217ENST00000493952 NUTM2AQ8IVF1 878 aaPredicted RBP23.05■■□□□ 1.28
SATB1-217ENST00000493952 RGS17Q9UGC6 210 aaPredicted RBP23.04■■□□□ 1.28
SATB1-217ENST00000493952 KRT28Q7Z3Y7 464 aa23.03■■□□□ 1.28
SATB1-217ENST00000493952 NUDT16Q96DE0 195 aaKnown RBP23.03■■□□□ 1.28
SATB1-217ENST00000493952 CARD11Q9BXL7 1154 aa23.02■■□□□ 1.28
SATB1-217ENST00000493952 TNS3Q68CZ2 1445 aa23.01■■□□□ 1.27
SATB1-217ENST00000493952 MEX3CQ5U5Q3 659 aaKnown RBP23.01■■□□□ 1.27
SATB1-217ENST00000493952 SPATA31A3Q5VYP0 1347 aa23.01■■□□□ 1.27
SATB1-217ENST00000493952 CCER1Q8TC90 406 aaPredicted RBP23■■□□□ 1.27
SATB1-217ENST00000493952 CRYBG1Q9Y4K1 1723 aa22.99■■□□□ 1.27
SATB1-217ENST00000493952 PSME1Q06323 249 aa22.99■■□□□ 1.27
SATB1-217ENST00000493952 SBNO1A3KN83 1393 aa22.99■■□□□ 1.27
SATB1-217ENST00000493952 SRPK2P78362 688 aaKnown RBP22.97■■□□□ 1.27
SATB1-217ENST00000493952 CABP2Q9NPB3 220 aa22.97■■□□□ 1.27
SATB1-217ENST00000493952 AKAP12Q02952 1782 aa22.96■■□□□ 1.27
SATB1-217ENST00000493952 NGDNQ8NEJ9 315 aaKnown RBP22.96■■□□□ 1.27
SATB1-217ENST00000493952 CCDC61Q9Y6R9 512 aa22.96■■□□□ 1.27
SATB1-217ENST00000493952 PPIP5K1Q6PFW1 1433 aa22.95■■□□□ 1.26
SATB1-217ENST00000493952 TIMELESSQ9UNS1 1208 aa22.95■■□□□ 1.26
SATB1-217ENST00000493952 SBNO2Q9Y2G9 1366 aa22.95■■□□□ 1.26
SATB1-217ENST00000493952 POLR3AO14802 1390 aaPredicted RBP22.94■■□□□ 1.26
SATB1-217ENST00000493952 EVC2Q86UK5 1308 aa22.94■■□□□ 1.26
SATB1-217ENST00000493952 ADAMTS2O95450 1211 aa22.93■■□□□ 1.26
SATB1-217ENST00000493952 POTEAQ6S8J7 498 aa22.92■■□□□ 1.26
SATB1-217ENST00000493952 ARHGEF10O15013 1369 aa22.91■■□□□ 1.26
SATB1-217ENST00000493952 ACEP12821 1306 aa22.91■■□□□ 1.26
SATB1-217ENST00000493952 PLEKHG3A1L390 1219 aa22.91■■□□□ 1.26
SATB1-217ENST00000493952 C8orf37Q96NL8 207 aa22.91■■□□□ 1.26
SATB1-217ENST00000493952 PHRF1Q9P1Y6 1649 aaKnown RBP22.9■■□□□ 1.26
SATB1-217ENST00000493952 AFF2P51816 1311 aa22.9■■□□□ 1.26
SATB1-217ENST00000493952 LMOD2Q6P5Q4 547 aa22.9■■□□□ 1.26
SATB1-217ENST00000493952 PLCH1Q4KWH8 1693 aa22.9■■□□□ 1.26
SATB1-217ENST00000493952 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.88■■□□□ 1.25
SATB1-217ENST00000493952 MON2Q7Z3U7 1717 aa22.88■■□□□ 1.25
SATB1-217ENST00000493952 ZNF772Q68DY9 489 aaPredicted RBP22.87■■□□□ 1.25
SATB1-217ENST00000493952 CABLES1Q8TDN4 633 aa22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms