RNA–Protein interactions for RNA: ENST00000493743.1

SEMA3F-209, Transcript of semaphorin 3F, humanhuman

TSL 3

Gene SEMA3F, Length 520 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-209ENST00000493743 FMN2Q9NZ56 1722 aa11.71□□□□□ -0.54
SEMA3F-209ENST00000493743 ORAI2Q96SN7 254 aa11.7□□□□□ -0.54
SEMA3F-209ENST00000493743 RGS12O14924 1447 aa11.69□□□□□ -0.54
SEMA3F-209ENST00000493743 TECPR2O15040 1411 aa11.69□□□□□ -0.54
SEMA3F-209ENST00000493743 SPATA31E1Q6ZUB1 1445 aa11.69□□□□□ -0.54
SEMA3F-209ENST00000493743 RGPD8O14715 1765 aaPredicted RBP11.69□□□□□ -0.54
SEMA3F-209ENST00000493743 KIF1AQ12756 1690 aa11.69□□□□□ -0.54
SEMA3F-209ENST00000493743 RBM6P78332 1123 aaKnown RBP11.69□□□□□ -0.54
SEMA3F-209ENST00000493743 ERICH6Q7L0X2 663 aa11.69□□□□□ -0.54
SEMA3F-209ENST00000493743 ANKRD30BQ9BXX2 1392 aa11.68□□□□□ -0.54
SEMA3F-209ENST00000493743 ADAMTS2O95450 1211 aa11.68□□□□□ -0.54
SEMA3F-209ENST00000493743 FOXD1Q16676 465 aa11.68□□□□□ -0.54
SEMA3F-209ENST00000493743 NGLY1Q96IV0 654 aa11.68□□□□□ -0.54
SEMA3F-209ENST00000493743 QTRT2Q9H974 415 aaKnown RBP11.68□□□□□ -0.54
SEMA3F-209ENST00000493743 PXDNQ92626 1479 aa11.68□□□□□ -0.54
SEMA3F-209ENST00000493743 ADGRF5Q8IZF2 1346 aa11.67□□□□□ -0.54
SEMA3F-209ENST00000493743 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.67□□□□□ -0.54
SEMA3F-209ENST00000493743 DAXXQ9UER7 740 aaPredicted RBP11.67□□□□□ -0.54
SEMA3F-209ENST00000493743 NPHP3Q7Z494 1330 aa11.66□□□□□ -0.54
SEMA3F-209ENST00000493743 MYOM2P54296 1465 aa11.66□□□□□ -0.54
SEMA3F-209ENST00000493743 PIK3C2GO75747 1445 aa11.66□□□□□ -0.54
SEMA3F-209ENST00000493743 LRPPRCP42704 1394 aaKnown RBP11.66□□□□□ -0.54
SEMA3F-209ENST00000493743 RGL3Q3MIN7 710 aa11.65□□□□□ -0.54
SEMA3F-209ENST00000493743 ESCO1Q5FWF5 840 aa11.65□□□□□ -0.54
SEMA3F-209ENST00000493743 MPHOSPH9Q99550 1183 aa11.65□□□□□ -0.54
SEMA3F-209ENST00000493743 ABCC11Q96J66 1382 aa11.65□□□□□ -0.55
SEMA3F-209ENST00000493743 STK26Q9P289 416 aa11.64□□□□□ -0.55
SEMA3F-209ENST00000493743 USP21Q9UK80 565 aa11.64□□□□□ -0.55
SEMA3F-209ENST00000493743 ATRNO75882 1429 aa11.63□□□□□ -0.55
SEMA3F-209ENST00000493743 YTHDC2Q9H6S0 1430 aaKnown RBP11.63□□□□□ -0.55
SEMA3F-209ENST00000493743 WAPLQ7Z5K2 1190 aa11.63□□□□□ -0.55
SEMA3F-209ENST00000493743 FNBP4Q8N3X1 1017 aaPredicted RBP11.63□□□□□ -0.55
SEMA3F-209ENST00000493743 TRPC5Q9UL62 973 aaPredicted RBP11.63□□□□□ -0.55
SEMA3F-209ENST00000493743 ABCA3Q99758 1704 aa11.63□□□□□ -0.55
SEMA3F-209ENST00000493743 ACIN1Q9UKV3 1341 aaKnown RBP11.62□□□□□ -0.55
SEMA3F-209ENST00000493743 USP32Q8NFA0 1604 aa11.62□□□□□ -0.55
SEMA3F-209ENST00000493743 TMEM132EQ6IEE7 984 aa11.62□□□□□ -0.55
SEMA3F-209ENST00000493743 ATAD2Q6PL18 1390 aa11.62□□□□□ -0.55
SEMA3F-209ENST00000493743 PLEKHH1Q9ULM0 1364 aa11.62□□□□□ -0.55
SEMA3F-209ENST00000493743 NUTM2FA1L443 756 aa11.61□□□□□ -0.55
SEMA3F-209ENST00000493743 FOXO3O43524 673 aa11.61□□□□□ -0.55
SEMA3F-209ENST00000493743 NRXN1Q9ULB1 1477 aa11.61□□□□□ -0.55
SEMA3F-209ENST00000493743 BRWD3Q6RI45 1802 aa11.6□□□□□ -0.55
SEMA3F-209ENST00000493743 PLCH1Q4KWH8 1693 aa11.6□□□□□ -0.55
SEMA3F-209ENST00000493743 BCL9LQ86UU0 1499 aa11.6□□□□□ -0.55
SEMA3F-209ENST00000493743 XPCQ01831 940 aaPredicted RBP11.6□□□□□ -0.55
SEMA3F-209ENST00000493743 NWD2Q9ULI1 1742 aa11.6□□□□□ -0.55
SEMA3F-209ENST00000493743 SIRT1Q96EB6 747 aa11.59□□□□□ -0.55
SEMA3F-209ENST00000493743 ADGRB2O60241 1585 aa11.58□□□□□ -0.55
SEMA3F-209ENST00000493743 DHX57Q6P158 1386 aaKnown RBP11.58□□□□□ -0.56
SEMA3F-209ENST00000493743 C14orf93Q9H972 538 aaKnown RBP11.58□□□□□ -0.56
SEMA3F-209ENST00000493743 DLC1Q96QB1 1528 aa11.58□□□□□ -0.56
SEMA3F-209ENST00000493743 SPATA31A3Q5VYP0 1347 aa11.58□□□□□ -0.56
SEMA3F-209ENST00000493743 SLIT2O94813 1529 aa11.57□□□□□ -0.56
SEMA3F-209ENST00000493743 GLI3P10071 1580 aa11.57□□□□□ -0.56
SEMA3F-209ENST00000493743 TNS3Q68CZ2 1445 aa11.56□□□□□ -0.56
SEMA3F-209ENST00000493743 TRPM3Q9HCF6 1732 aaPredicted RBP11.55□□□□□ -0.56
SEMA3F-209ENST00000493743 CFAP70Q5T0N1 1121 aa11.55□□□□□ -0.56
SEMA3F-209ENST00000493743 KRT28Q7Z3Y7 464 aa11.55□□□□□ -0.56
SEMA3F-209ENST00000493743 GJD4Q96KN9 370 aaPredicted RBP11.55□□□□□ -0.56
SEMA3F-209ENST00000493743 PHF8Q9UPP1 1060 aa11.55□□□□□ -0.56
SEMA3F-209ENST00000493743 ITSN1Q15811 1721 aa11.55□□□□□ -0.56
SEMA3F-209ENST00000493743 ADGRB1O14514 1584 aa11.54□□□□□ -0.56
SEMA3F-209ENST00000493743 ANKARQ7Z5J8 1434 aa11.54□□□□□ -0.56
SEMA3F-209ENST00000493743 RALGAPBQ86X10 1494 aa11.54□□□□□ -0.56
SEMA3F-209ENST00000493743 ALS2Q96Q42 1657 aa11.54□□□□□ -0.56
SEMA3F-209ENST00000493743 RAB3GAP2Q9H2M9 1393 aa11.54□□□□□ -0.56
SEMA3F-209ENST00000493743 NRAPQ86VF7 1730 aa11.53□□□□□ -0.56
SEMA3F-209ENST00000493743 ARHGEF28Q8N1W1 1705 aaKnown RBP11.53□□□□□ -0.56
SEMA3F-209ENST00000493743 PSME1Q06323 249 aa11.53□□□□□ -0.56
SEMA3F-209ENST00000493743 UNC5CLQ8IV45 518 aa11.53□□□□□ -0.56
SEMA3F-209ENST00000493743 PRAM1Q96QH2 718 aa11.53□□□□□ -0.56
SEMA3F-209ENST00000493743 SBNO1A3KN83 1393 aa11.53□□□□□ -0.56
SEMA3F-209ENST00000493743 CRYBG1Q9Y4K1 1723 aa11.52□□□□□ -0.56
SEMA3F-209ENST00000493743 HAP1P54257 671 aaPredicted RBP11.52□□□□□ -0.57
SEMA3F-209ENST00000493743 SAFB2Q14151 953 aaKnown RBP eCLIP11.52□□□□□ -0.57
SEMA3F-209ENST00000493743 CCDC125Q86Z20 511 aa11.52□□□□□ -0.57
SEMA3F-209ENST00000493743 ARHGEF10O15013 1369 aa11.52□□□□□ -0.57
SEMA3F-209ENST00000493743 POGKQ9P215 609 aa11.51□□□□□ -0.57
SEMA3F-209ENST00000493743 COL14A1Q05707 1796 aaKnown RBP11.51□□□□□ -0.57
SEMA3F-209ENST00000493743 TULP4Q9NRJ4 1543 aa11.5□□□□□ -0.57
SEMA3F-209ENST00000493743 EIF3AQ14152 1382 aaKnown RBP11.5□□□□□ -0.57
SEMA3F-209ENST00000493743 LMOD2Q6P5Q4 547 aa11.49□□□□□ -0.57
SEMA3F-209ENST00000493743 CABLES1Q8TDN4 633 aa11.49□□□□□ -0.57
SEMA3F-209ENST00000493743 ZRANB1Q9UGI0 708 aa11.49□□□□□ -0.57
SEMA3F-209ENST00000493743 EP400Q96L91 3159 aa11.49□□□□□ -0.57
SEMA3F-209ENST00000493743 VPS72Q15906 364 aa11.48□□□□□ -0.57
SEMA3F-209ENST00000493743 PMFBP1Q8TBY8 1022 aa11.48□□□□□ -0.57
SEMA3F-209ENST00000493743 BLMP54132 1417 aaPredicted RBP11.48□□□□□ -0.57
SEMA3F-209ENST00000493743 KIAA1210Q9ULL0 1709 aa11.48□□□□□ -0.57
SEMA3F-209ENST00000493743 PLEKHG5O94827 1062 aa11.47□□□□□ -0.57
SEMA3F-209ENST00000493743 TRAK1Q9UPV9 953 aa11.47□□□□□ -0.57
SEMA3F-209ENST00000493743 RGPD1P0DJD0 1748 aa11.46□□□□□ -0.57
SEMA3F-209ENST00000493743 TOPAZ1Q8N9V7 1692 aa11.46□□□□□ -0.57
SEMA3F-209ENST00000493743 PHRF1Q9P1Y6 1649 aaKnown RBP11.46□□□□□ -0.57
SEMA3F-209ENST00000493743 GPRASP1Q5JY77 1395 aa11.46□□□□□ -0.57
SEMA3F-209ENST00000493743 MINK1Q8N4C8 1332 aaPredicted RBP11.46□□□□□ -0.57
SEMA3F-209ENST00000493743 DCAF11Q8TEB1 546 aa11.46□□□□□ -0.57
SEMA3F-209ENST00000493743 STAC3Q96MF2 364 aa11.46□□□□□ -0.57
SEMA3F-209ENST00000493743 HIRIP3Q9BW71 556 aaPredicted RBP11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms