RNA–Protein interactions for RNA: ENST00000493511.1

GTF3C2-212, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 3

Gene GTF3C2, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-212ENST00000493511 PLEKHH1Q9ULM0 1364 aa26.07■■□□□ 1.76
GTF3C2-212ENST00000493511 DLC1Q96QB1 1528 aa26.06■■□□□ 1.76
GTF3C2-212ENST00000493511 PRAM1Q96QH2 718 aa26.04■■□□□ 1.76
GTF3C2-212ENST00000493511 PHF23Q9BUL5 403 aaPredicted RBP26.03■■□□□ 1.76
GTF3C2-212ENST00000493511 POGKQ9P215 609 aa26.03■■□□□ 1.76
GTF3C2-212ENST00000493511 SIN3AQ96ST3 1273 aa26.02■■□□□ 1.76
GTF3C2-212ENST00000493511 NHSL1Q5SYE7 1610 aa26.02■■□□□ 1.76
GTF3C2-212ENST00000493511 TRAK1Q9UPV9 953 aa26.01■■□□□ 1.75
GTF3C2-212ENST00000493511 NEUROD1Q13562 356 aa26■■□□□ 1.75
GTF3C2-212ENST00000493511 ORAI2Q96SN7 254 aa26■■□□□ 1.75
GTF3C2-212ENST00000493511 SAFB2Q14151 953 aaKnown RBP eCLIP25.99■■□□□ 1.75
GTF3C2-212ENST00000493511 KIAA1210Q9ULL0 1709 aa25.98■■□□□ 1.75
GTF3C2-212ENST00000493511 ESCO1Q5FWF5 840 aa25.98■■□□□ 1.75
GTF3C2-212ENST00000493511 L3MBTL2Q969R5 705 aa25.98■■□□□ 1.75
GTF3C2-212ENST00000493511 LRRC59Q96AG4 307 aaKnown RBP25.98■■□□□ 1.75
GTF3C2-212ENST00000493511 SPATA31A6Q5VVP1 1343 aa25.97■■□□□ 1.75
GTF3C2-212ENST00000493511 DDX17Q92841 729 aaKnown RBP25.95■■□□□ 1.74
GTF3C2-212ENST00000493511 SHPRHQ149N8 1683 aa25.95■■□□□ 1.74
GTF3C2-212ENST00000493511 FMN2Q9NZ56 1722 aa25.94■■□□□ 1.74
GTF3C2-212ENST00000493511 NUTM2FA1L443 756 aa25.94■■□□□ 1.74
GTF3C2-212ENST00000493511 NPHP3Q7Z494 1330 aa25.92■■□□□ 1.74
GTF3C2-212ENST00000493511 ILDR2Q71H61 639 aa25.92■■□□□ 1.74
GTF3C2-212ENST00000493511 SOS2Q07890 1332 aaPredicted RBP25.91■■□□□ 1.74
GTF3C2-212ENST00000493511 ADGRB2O60241 1585 aa25.9■■□□□ 1.74
GTF3C2-212ENST00000493511 MINK1Q8N4C8 1332 aaPredicted RBP25.88■■□□□ 1.73
GTF3C2-212ENST00000493511 ARHGEF28Q8N1W1 1705 aaKnown RBP25.88■■□□□ 1.73
GTF3C2-212ENST00000493511 NBPF1Q3BBV0 1214 aa25.88■■□□□ 1.73
GTF3C2-212ENST00000493511 EIF3AQ14152 1382 aaKnown RBP25.87■■□□□ 1.73
GTF3C2-212ENST00000493511 FOXO3O43524 673 aa25.87■■□□□ 1.73
GTF3C2-212ENST00000493511 HIRIP3Q9BW71 556 aaPredicted RBP25.87■■□□□ 1.73
GTF3C2-212ENST00000493511 ANKARQ7Z5J8 1434 aa25.86■■□□□ 1.73
GTF3C2-212ENST00000493511 KIF1AQ12756 1690 aa25.86■■□□□ 1.73
GTF3C2-212ENST00000493511 PNPLA6Q8IY17 1366 aa25.85■■□□□ 1.73
GTF3C2-212ENST00000493511 MEX3CQ5U5Q3 659 aaKnown RBP25.85■■□□□ 1.73
GTF3C2-212ENST00000493511 LRP6O75581 1613 aa25.84■■□□□ 1.73
GTF3C2-212ENST00000493511 TONSLQ96HA7 1378 aa25.83■■□□□ 1.73
GTF3C2-212ENST00000493511 WASLO00401 505 aaPredicted RBP25.83■■□□□ 1.73
GTF3C2-212ENST00000493511 PHF8Q9UPP1 1060 aa25.83■■□□□ 1.73
GTF3C2-212ENST00000493511 NUTM2BA6NNL0 878 aaPredicted RBP25.82■■□□□ 1.72
GTF3C2-212ENST00000493511 NUTM2EB1AL46 878 aaPredicted RBP25.82■■□□□ 1.72
GTF3C2-212ENST00000493511 NUTM2AQ8IVF1 878 aaPredicted RBP25.82■■□□□ 1.72
GTF3C2-212ENST00000493511 PXDNQ92626 1479 aa25.82■■□□□ 1.72
GTF3C2-212ENST00000493511 RGS17Q9UGC6 210 aaPredicted RBP25.81■■□□□ 1.72
GTF3C2-212ENST00000493511 RGPD8O14715 1765 aaPredicted RBP25.79■■□□□ 1.72
GTF3C2-212ENST00000493511 TULP4Q9NRJ4 1543 aa25.79■■□□□ 1.72
GTF3C2-212ENST00000493511 XPCQ01831 940 aaPredicted RBP25.79■■□□□ 1.72
GTF3C2-212ENST00000493511 TRPM1Q7Z4N2 1603 aa25.78■■□□□ 1.72
GTF3C2-212ENST00000493511 ROCK2O75116 1388 aaKnown RBP25.78■■□□□ 1.72
GTF3C2-212ENST00000493511 PCGF6Q9BYE7 350 aa25.77■■□□□ 1.72
GTF3C2-212ENST00000493511 USP32Q8NFA0 1604 aa25.77■■□□□ 1.72
GTF3C2-212ENST00000493511 CENPJQ9HC77 1338 aaPredicted RBP25.76■■□□□ 1.71
GTF3C2-212ENST00000493511 PSME1Q06323 249 aa25.75■■□□□ 1.71
GTF3C2-212ENST00000493511 KRT28Q7Z3Y7 464 aa25.75■■□□□ 1.71
GTF3C2-212ENST00000493511 PRR36Q9H6K5 1346 aa25.73■■□□□ 1.71
GTF3C2-212ENST00000493511 PMFBP1Q8TBY8 1022 aa25.73■■□□□ 1.71
GTF3C2-212ENST00000493511 SOCS7O14512 581 aa25.72■■□□□ 1.71
GTF3C2-212ENST00000493511 NBPF8Q3BBV2 869 aa25.72■■□□□ 1.71
GTF3C2-212ENST00000493511 ZNF772Q68DY9 489 aaPredicted RBP25.72■■□□□ 1.71
GTF3C2-212ENST00000493511 CDK19Q9BWU1 502 aa25.72■■□□□ 1.71
GTF3C2-212ENST00000493511 COL22A1Q8NFW1 1626 aaPredicted RBP25.72■■□□□ 1.71
GTF3C2-212ENST00000493511 SPATA31A3Q5VYP0 1347 aa25.71■■□□□ 1.71
GTF3C2-212ENST00000493511 NUDT16Q96DE0 195 aaKnown RBP25.7■■□□□ 1.7
GTF3C2-212ENST00000493511 ATP7BP35670 1465 aa25.7■■□□□ 1.7
GTF3C2-212ENST00000493511 POTEAQ6S8J7 498 aa25.69■■□□□ 1.7
GTF3C2-212ENST00000493511 SBNO1A3KN83 1393 aa25.69■■□□□ 1.7
GTF3C2-212ENST00000493511 GPRASP1Q5JY77 1395 aa25.69■■□□□ 1.7
GTF3C2-212ENST00000493511 ADAMTS2O95450 1211 aa25.68■■□□□ 1.7
GTF3C2-212ENST00000493511 TNS3Q68CZ2 1445 aa25.68■■□□□ 1.7
GTF3C2-212ENST00000493511 ITSN1Q15811 1721 aa25.68■■□□□ 1.7
GTF3C2-212ENST00000493511 NGDNQ8NEJ9 315 aaKnown RBP25.67■■□□□ 1.7
GTF3C2-212ENST00000493511 C8orf37Q96NL8 207 aa25.67■■□□□ 1.7
GTF3C2-212ENST00000493511 QRICH2Q9H0J4 1663 aa25.67■■□□□ 1.7
GTF3C2-212ENST00000493511 CLSPNQ9HAW4 1339 aa25.66■■□□□ 1.7
GTF3C2-212ENST00000493511 AFF2P51816 1311 aa25.65■■□□□ 1.7
GTF3C2-212ENST00000493511 CCDC61Q9Y6R9 512 aa25.65■■□□□ 1.7
GTF3C2-212ENST00000493511 ARHGEF10O15013 1369 aa25.65■■□□□ 1.7
GTF3C2-212ENST00000493511 RALGAPBQ86X10 1494 aa25.65■■□□□ 1.7
GTF3C2-212ENST00000493511 SRPK2P78362 688 aaKnown RBP25.64■■□□□ 1.7
GTF3C2-212ENST00000493511 CARD11Q9BXL7 1154 aa25.64■■□□□ 1.7
GTF3C2-212ENST00000493511 NGLY1Q96IV0 654 aa25.63■■□□□ 1.69
GTF3C2-212ENST00000493511 LMOD2Q6P5Q4 547 aa25.62■■□□□ 1.69
GTF3C2-212ENST00000493511 EVC2Q86UK5 1308 aa25.6■■□□□ 1.69
GTF3C2-212ENST00000493511 TOPAZ1Q8N9V7 1692 aa25.59■■□□□ 1.69
GTF3C2-212ENST00000493511 PLEKHG3A1L390 1219 aa25.58■■□□□ 1.69
GTF3C2-212ENST00000493511 HAP1P54257 671 aaPredicted RBP25.58■■□□□ 1.69
GTF3C2-212ENST00000493511 CABP2Q9NPB3 220 aa25.58■■□□□ 1.69
GTF3C2-212ENST00000493511 TRPM3Q9HCF6 1732 aaPredicted RBP25.57■■□□□ 1.68
GTF3C2-212ENST00000493511 TIMELESSQ9UNS1 1208 aa25.57■■□□□ 1.68
GTF3C2-212ENST00000493511 POLR3AO14802 1390 aaPredicted RBP25.56■■□□□ 1.68
GTF3C2-212ENST00000493511 PAK3O75914 559 aaPredicted RBP25.55■■□□□ 1.68
GTF3C2-212ENST00000493511 FNBP4Q8N3X1 1017 aaPredicted RBP25.55■■□□□ 1.68
GTF3C2-212ENST00000493511 ACEP12821 1306 aa25.55■■□□□ 1.68
GTF3C2-212ENST00000493511 PPIP5K1Q6PFW1 1433 aa25.54■■□□□ 1.68
GTF3C2-212ENST00000493511 RXRBP28702 533 aa25.54■■□□□ 1.68
GTF3C2-212ENST00000493511 SBNO2Q9Y2G9 1366 aa25.54■■□□□ 1.68
GTF3C2-212ENST00000493511 MARF1Q9Y4F3 1742 aaKnown RBP25.54■■□□□ 1.68
GTF3C2-212ENST00000493511 USP21Q9UK80 565 aa25.53■■□□□ 1.68
GTF3C2-212ENST00000493511 ALS2Q96Q42 1657 aa25.52■■□□□ 1.68
GTF3C2-212ENST00000493511 CABLES1Q8TDN4 633 aa25.52■■□□□ 1.68
GTF3C2-212ENST00000493511 QTRT2Q9H974 415 aaKnown RBP25.52■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms