RNA–Protein interactions for RNA: ENST00000493085.5

GPM6B-209, Transcript of glycoprotein M6B, humanhuman

TSL 3

Gene GPM6B, Length 558 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPM6B-209ENST00000493085 C1orf167Q5SNV9 1468 aa15.11■□□□□ 0.01
GPM6B-209ENST00000493085 DLC1Q96QB1 1528 aa15.11■□□□□ 0.01
GPM6B-209ENST00000493085 COL16A1Q07092 1604 aaPredicted RBP15.1■□□□□ 0.01
GPM6B-209ENST00000493085 PRAM1Q96QH2 718 aa15.09■□□□□ 0.01
GPM6B-209ENST00000493085 POGKQ9P215 609 aa15.09■□□□□ 0.01
GPM6B-209ENST00000493085 TRAK1Q9UPV9 953 aa15.09■□□□□ 0.01
GPM6B-209ENST00000493085 KIAA1210Q9ULL0 1709 aa15.09■□□□□ 0.01
GPM6B-209ENST00000493085 NHSL1Q5SYE7 1610 aa15.08■□□□□ 0
GPM6B-209ENST00000493085 SAFB2Q14151 953 aaKnown RBP eCLIP15.08■□□□□ 0
GPM6B-209ENST00000493085 L3MBTL2Q969R5 705 aa15.08■□□□□ 0
GPM6B-209ENST00000493085 JCADQ9P266 1359 aa15.08■□□□□ 0
GPM6B-209ENST00000493085 ORAI2Q96SN7 254 aa15.06■□□□□ 0
GPM6B-209ENST00000493085 FMN2Q9NZ56 1722 aa15.06■□□□□ 0
GPM6B-209ENST00000493085 NUTM2FA1L443 756 aa15.05■□□□□ -0
GPM6B-209ENST00000493085 DDX17Q92841 729 aaKnown RBP15.05■□□□□ -0
GPM6B-209ENST00000493085 ARHGEF28Q8N1W1 1705 aaKnown RBP15.04■□□□□ -0
GPM6B-209ENST00000493085 ESCO1Q5FWF5 840 aa15.04■□□□□ -0
GPM6B-209ENST00000493085 PHF23Q9BUL5 403 aaPredicted RBP15.04■□□□□ -0
GPM6B-209ENST00000493085 SHPRHQ149N8 1683 aa15.03■□□□□ -0
GPM6B-209ENST00000493085 NBPF1Q3BBV0 1214 aa15.02■□□□□ -0
GPM6B-209ENST00000493085 ADGRB2O60241 1585 aa15.02□□□□□ -0.01
GPM6B-209ENST00000493085 MINK1Q8N4C8 1332 aaPredicted RBP15.01□□□□□ -0.01
GPM6B-209ENST00000493085 LRRC59Q96AG4 307 aaKnown RBP15.01□□□□□ -0.01
GPM6B-209ENST00000493085 PCGF6Q9BYE7 350 aa15.01□□□□□ -0.01
GPM6B-209ENST00000493085 RGPD8O14715 1765 aaPredicted RBP15.01□□□□□ -0.01
GPM6B-209ENST00000493085 TONSLQ96HA7 1378 aa15□□□□□ -0.01
GPM6B-209ENST00000493085 SPATA31A6Q5VVP1 1343 aa15□□□□□ -0.01
GPM6B-209ENST00000493085 NPHP3Q7Z494 1330 aa15□□□□□ -0.01
GPM6B-209ENST00000493085 HIRIP3Q9BW71 556 aaPredicted RBP15□□□□□ -0.01
GPM6B-209ENST00000493085 SOS2Q07890 1332 aaPredicted RBP14.99□□□□□ -0.01
GPM6B-209ENST00000493085 KIF1AQ12756 1690 aa14.99□□□□□ -0.01
GPM6B-209ENST00000493085 TRPM1Q7Z4N2 1603 aa14.99□□□□□ -0.01
GPM6B-209ENST00000493085 FOXO3O43524 673 aa14.98□□□□□ -0.01
GPM6B-209ENST00000493085 ILDR2Q71H61 639 aa14.98□□□□□ -0.01
GPM6B-209ENST00000493085 EIF3AQ14152 1382 aaKnown RBP14.98□□□□□ -0.01
GPM6B-209ENST00000493085 ANKARQ7Z5J8 1434 aa14.97□□□□□ -0.01
GPM6B-209ENST00000493085 PNPLA6Q8IY17 1366 aa14.97□□□□□ -0.01
GPM6B-209ENST00000493085 WASLO00401 505 aaPredicted RBP14.96□□□□□ -0.01
GPM6B-209ENST00000493085 MEX3CQ5U5Q3 659 aaKnown RBP14.96□□□□□ -0.01
GPM6B-209ENST00000493085 PHF8Q9UPP1 1060 aa14.96□□□□□ -0.01
GPM6B-209ENST00000493085 ROCK2O75116 1388 aaKnown RBP14.96□□□□□ -0.02
GPM6B-209ENST00000493085 LRP6O75581 1613 aa14.95□□□□□ -0.02
GPM6B-209ENST00000493085 USP32Q8NFA0 1604 aa14.95□□□□□ -0.02
GPM6B-209ENST00000493085 NUTM2BA6NNL0 878 aaPredicted RBP14.95□□□□□ -0.02
GPM6B-209ENST00000493085 NUTM2EB1AL46 878 aaPredicted RBP14.95□□□□□ -0.02
GPM6B-209ENST00000493085 XPCQ01831 940 aaPredicted RBP14.95□□□□□ -0.02
GPM6B-209ENST00000493085 NUTM2AQ8IVF1 878 aaPredicted RBP14.95□□□□□ -0.02
GPM6B-209ENST00000493085 TULP4Q9NRJ4 1543 aa14.95□□□□□ -0.02
GPM6B-209ENST00000493085 PXDNQ92626 1479 aa14.95□□□□□ -0.02
GPM6B-209ENST00000493085 NBPF8Q3BBV2 869 aa14.94□□□□□ -0.02
GPM6B-209ENST00000493085 CENPJQ9HC77 1338 aaPredicted RBP14.93□□□□□ -0.02
GPM6B-209ENST00000493085 PRR36Q9H6K5 1346 aa14.92□□□□□ -0.02
GPM6B-209ENST00000493085 KRT28Q7Z3Y7 464 aa14.92□□□□□ -0.02
GPM6B-209ENST00000493085 PMFBP1Q8TBY8 1022 aa14.92□□□□□ -0.02
GPM6B-209ENST00000493085 RGS17Q9UGC6 210 aaPredicted RBP14.92□□□□□ -0.02
GPM6B-209ENST00000493085 QRICH2Q9H0J4 1663 aa14.92□□□□□ -0.02
GPM6B-209ENST00000493085 CDK19Q9BWU1 502 aa14.91□□□□□ -0.02
GPM6B-209ENST00000493085 ITSN1Q15811 1721 aa14.91□□□□□ -0.02
GPM6B-209ENST00000493085 PSME1Q06323 249 aa14.9□□□□□ -0.02
GPM6B-209ENST00000493085 ATP7BP35670 1465 aa14.89□□□□□ -0.03
GPM6B-209ENST00000493085 GPRASP1Q5JY77 1395 aa14.89□□□□□ -0.03
GPM6B-209ENST00000493085 COL22A1Q8NFW1 1626 aaPredicted RBP14.89□□□□□ -0.03
GPM6B-209ENST00000493085 NUDT16Q96DE0 195 aaKnown RBP14.89□□□□□ -0.03
GPM6B-209ENST00000493085 SPATA31A3Q5VYP0 1347 aa14.89□□□□□ -0.03
GPM6B-209ENST00000493085 CLSPNQ9HAW4 1339 aa14.89□□□□□ -0.03
GPM6B-209ENST00000493085 RALGAPBQ86X10 1494 aa14.89□□□□□ -0.03
GPM6B-209ENST00000493085 CARD11Q9BXL7 1154 aa14.88□□□□□ -0.03
GPM6B-209ENST00000493085 TNS3Q68CZ2 1445 aa14.87□□□□□ -0.03
GPM6B-209ENST00000493085 ADAMTS2O95450 1211 aa14.87□□□□□ -0.03
GPM6B-209ENST00000493085 SRPK2P78362 688 aaKnown RBP14.87□□□□□ -0.03
GPM6B-209ENST00000493085 NGDNQ8NEJ9 315 aaKnown RBP14.87□□□□□ -0.03
GPM6B-209ENST00000493085 SBNO1A3KN83 1393 aa14.86□□□□□ -0.03
GPM6B-209ENST00000493085 POTEAQ6S8J7 498 aa14.86□□□□□ -0.03
GPM6B-209ENST00000493085 C8orf37Q96NL8 207 aa14.86□□□□□ -0.03
GPM6B-209ENST00000493085 TOPAZ1Q8N9V7 1692 aa14.85□□□□□ -0.03
GPM6B-209ENST00000493085 ZNF772Q68DY9 489 aaPredicted RBP14.85□□□□□ -0.03
GPM6B-209ENST00000493085 LMOD2Q6P5Q4 547 aa14.85□□□□□ -0.03
GPM6B-209ENST00000493085 CCDC61Q9Y6R9 512 aa14.85□□□□□ -0.03
GPM6B-209ENST00000493085 TRPM3Q9HCF6 1732 aaPredicted RBP14.84□□□□□ -0.03
GPM6B-209ENST00000493085 CABP2Q9NPB3 220 aa14.84□□□□□ -0.03
GPM6B-209ENST00000493085 AFF2P51816 1311 aa14.84□□□□□ -0.03
GPM6B-209ENST00000493085 EVC2Q86UK5 1308 aa14.84□□□□□ -0.03
GPM6B-209ENST00000493085 CCER1Q8TC90 406 aaPredicted RBP14.83□□□□□ -0.04
GPM6B-209ENST00000493085 ARHGEF10O15013 1369 aa14.83□□□□□ -0.04
GPM6B-209ENST00000493085 SOCS7O14512 581 aa14.82□□□□□ -0.04
GPM6B-209ENST00000493085 NGLY1Q96IV0 654 aa14.82□□□□□ -0.04
GPM6B-209ENST00000493085 MARF1Q9Y4F3 1742 aaKnown RBP14.82□□□□□ -0.04
GPM6B-209ENST00000493085 PLEKHG3A1L390 1219 aa14.81□□□□□ -0.04
GPM6B-209ENST00000493085 PAK3O75914 559 aaPredicted RBP14.81□□□□□ -0.04
GPM6B-209ENST00000493085 PLEKHG5O94827 1062 aa14.81□□□□□ -0.04
GPM6B-209ENST00000493085 HAP1P54257 671 aaPredicted RBP14.81□□□□□ -0.04
GPM6B-209ENST00000493085 TIMELESSQ9UNS1 1208 aa14.81□□□□□ -0.04
GPM6B-209ENST00000493085 ACEP12821 1306 aa14.81□□□□□ -0.04
GPM6B-209ENST00000493085 POLR3AO14802 1390 aaPredicted RBP14.81□□□□□ -0.04
GPM6B-209ENST00000493085 PPIP5K1Q6PFW1 1433 aa14.81□□□□□ -0.04
GPM6B-209ENST00000493085 ALS2Q96Q42 1657 aa14.81□□□□□ -0.04
GPM6B-209ENST00000493085 SBNO2Q9Y2G9 1366 aa14.79□□□□□ -0.04
GPM6B-209ENST00000493085 ABCA3Q99758 1704 aa14.78□□□□□ -0.04
GPM6B-209ENST00000493085 CABLES1Q8TDN4 633 aa14.78□□□□□ -0.04
GPM6B-209ENST00000493085 CABP1Q9NZU7 370 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms