RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 DCCP43146 1447 aa19.92■□□□□ 0.78
CCM2-217ENST00000492883 HSPA1LP34931 641 aa19.89■□□□□ 0.77
CCM2-217ENST00000492883 DLC1Q96QB1 1528 aa19.89■□□□□ 0.77
CCM2-217ENST00000492883 MINK1Q8N4C8 1332 aaPredicted RBP19.88■□□□□ 0.77
CCM2-217ENST00000492883 NUTM2FA1L443 756 aa19.87■□□□□ 0.77
CCM2-217ENST00000492883 HIRIP3Q9BW71 556 aaPredicted RBP19.87■□□□□ 0.77
CCM2-217ENST00000492883 CARD11Q9BXL7 1154 aa19.87■□□□□ 0.77
CCM2-217ENST00000492883 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.87■□□□□ 0.77
CCM2-217ENST00000492883 MST1RQ04912 1400 aa19.85■□□□□ 0.77
CCM2-217ENST00000492883 KNDC1Q76NI1 1749 aa19.85■□□□□ 0.77
CCM2-217ENST00000492883 KIAA1210Q9ULL0 1709 aa19.85■□□□□ 0.77
CCM2-217ENST00000492883 BRINP3Q76B58 766 aa19.85■□□□□ 0.77
CCM2-217ENST00000492883 ESCO1Q5FWF5 840 aa19.83■□□□□ 0.77
CCM2-217ENST00000492883 CENPJQ9HC77 1338 aaPredicted RBP19.82■□□□□ 0.76
CCM2-217ENST00000492883 C1orf167Q5SNV9 1468 aa19.82■□□□□ 0.76
CCM2-217ENST00000492883 ORAI2Q96SN7 254 aa19.82■□□□□ 0.76
CCM2-217ENST00000492883 NALCNQ8IZF0 1738 aa19.82■□□□□ 0.76
CCM2-217ENST00000492883 WASLO00401 505 aaPredicted RBP19.81■□□□□ 0.76
CCM2-217ENST00000492883 GPRASP1Q5JY77 1395 aa19.81■□□□□ 0.76
CCM2-217ENST00000492883 TRPM1Q7Z4N2 1603 aa19.8■□□□□ 0.76
CCM2-217ENST00000492883 EIF3AQ14152 1382 aaKnown RBP19.79■□□□□ 0.76
CCM2-217ENST00000492883 RALGAPBQ86X10 1494 aa19.79■□□□□ 0.76
CCM2-217ENST00000492883 CDC42BPGQ6DT37 1551 aa19.78■□□□□ 0.76
CCM2-217ENST00000492883 CDK19Q9BWU1 502 aa19.77■□□□□ 0.76
CCM2-217ENST00000492883 ROBO1Q9Y6N7 1651 aa19.77■□□□□ 0.76
CCM2-217ENST00000492883 DDX17Q92841 729 aaKnown RBP19.76■□□□□ 0.75
CCM2-217ENST00000492883 FOXO3O43524 673 aa19.73■□□□□ 0.75
CCM2-217ENST00000492883 SRPK2P78362 688 aaKnown RBP19.73■□□□□ 0.75
CCM2-217ENST00000492883 PHF8Q9UPP1 1060 aa19.73■□□□□ 0.75
CCM2-217ENST00000492883 ARHGEF28Q8N1W1 1705 aaKnown RBP19.72■□□□□ 0.75
CCM2-217ENST00000492883 NUDT16Q96DE0 195 aaKnown RBP19.72■□□□□ 0.75
CCM2-217ENST00000492883 PMFBP1Q8TBY8 1022 aa19.71■□□□□ 0.75
CCM2-217ENST00000492883 NPHP3Q7Z494 1330 aa19.71■□□□□ 0.75
CCM2-217ENST00000492883 EVC2Q86UK5 1308 aa19.71■□□□□ 0.75
CCM2-217ENST00000492883 PRR36Q9H6K5 1346 aa19.71■□□□□ 0.75
CCM2-217ENST00000492883 ANKARQ7Z5J8 1434 aa19.7■□□□□ 0.74
CCM2-217ENST00000492883 LRRC59Q96AG4 307 aaKnown RBP19.7■□□□□ 0.74
CCM2-217ENST00000492883 CABP2Q9NPB3 220 aa19.7■□□□□ 0.74
CCM2-217ENST00000492883 ADGRB2O60241 1585 aa19.7■□□□□ 0.74
CCM2-217ENST00000492883 ST20-MTHFSA0A0A6YYL1 179 aa19.69■□□□□ 0.74
CCM2-217ENST00000492883 XPCQ01831 940 aaPredicted RBP19.68■□□□□ 0.74
CCM2-217ENST00000492883 CCDC61Q9Y6R9 512 aa19.68■□□□□ 0.74
CCM2-217ENST00000492883 PSME1Q06323 249 aa19.67■□□□□ 0.74
CCM2-217ENST00000492883 NGDNQ8NEJ9 315 aaKnown RBP19.67■□□□□ 0.74
CCM2-217ENST00000492883 SOS2Q07890 1332 aaPredicted RBP19.67■□□□□ 0.74
CCM2-217ENST00000492883 FMN2Q9NZ56 1722 aa19.66■□□□□ 0.74
CCM2-217ENST00000492883 KRT28Q7Z3Y7 464 aa19.66■□□□□ 0.74
CCM2-217ENST00000492883 USP47Q96K76 1375 aa19.66■□□□□ 0.74
CCM2-217ENST00000492883 JCADQ9P266 1359 aa19.66■□□□□ 0.74
CCM2-217ENST00000492883 TULP4Q9NRJ4 1543 aa19.66■□□□□ 0.74
CCM2-217ENST00000492883 AHDC1Q5TGY3 1603 aaPredicted RBP19.65■□□□□ 0.74
CCM2-217ENST00000492883 SLC24A1O60721 1099 aa19.65■□□□□ 0.74
CCM2-217ENST00000492883 PHLPP1O60346 1717 aa19.63■□□□□ 0.73
CCM2-217ENST00000492883 SBNO2Q9Y2G9 1366 aa19.63■□□□□ 0.73
CCM2-217ENST00000492883 PLEKHG3A1L390 1219 aa19.61■□□□□ 0.73
CCM2-217ENST00000492883 TESK2Q96S53 571 aa19.61■□□□□ 0.73
CCM2-217ENST00000492883 CABP1Q9NZU7 370 aa19.61■□□□□ 0.73
CCM2-217ENST00000492883 ATP7BP35670 1465 aa19.6■□□□□ 0.73
CCM2-217ENST00000492883 QRICH2Q9H0J4 1663 aa19.6■□□□□ 0.73
CCM2-217ENST00000492883 COL16A1Q07092 1604 aaPredicted RBP19.59■□□□□ 0.73
CCM2-217ENST00000492883 ACEP12821 1306 aa19.59■□□□□ 0.73
CCM2-217ENST00000492883 EIF4G2P78344 907 aaKnown RBP eCLIP19.59■□□□□ 0.73
CCM2-217ENST00000492883 TMF1P82094 1093 aa19.59■□□□□ 0.73
CCM2-217ENST00000492883 LMOD2Q6P5Q4 547 aa19.59■□□□□ 0.73
CCM2-217ENST00000492883 USP32Q8NFA0 1604 aa19.58■□□□□ 0.73
CCM2-217ENST00000492883 SPATA31A6Q5VVP1 1343 aa19.58■□□□□ 0.73
CCM2-217ENST00000492883 NUTM2BA6NNL0 878 aaPredicted RBP19.58■□□□□ 0.72
CCM2-217ENST00000492883 NUTM2EB1AL46 878 aaPredicted RBP19.58■□□□□ 0.72
CCM2-217ENST00000492883 NUTM2AQ8IVF1 878 aaPredicted RBP19.58■□□□□ 0.72
CCM2-217ENST00000492883 PPIP5K1Q6PFW1 1433 aa19.58■□□□□ 0.72
CCM2-217ENST00000492883 NHSL1Q5SYE7 1610 aa19.58■□□□□ 0.72
CCM2-217ENST00000492883 ATAD2Q6PL18 1390 aa19.57■□□□□ 0.72
CCM2-217ENST00000492883 PAK3O75914 559 aaPredicted RBP19.57■□□□□ 0.72
CCM2-217ENST00000492883 SPATA31A3Q5VYP0 1347 aa19.56■□□□□ 0.72
CCM2-217ENST00000492883 PXDNQ92626 1479 aa19.56■□□□□ 0.72
CCM2-217ENST00000492883 PNPLA6Q8IY17 1366 aa19.56■□□□□ 0.72
CCM2-217ENST00000492883 KIF1AQ12756 1690 aa19.56■□□□□ 0.72
CCM2-217ENST00000492883 HSPA5P11021 654 aaKnown RBP19.55■□□□□ 0.72
CCM2-217ENST00000492883 TMC1Q8TDI8 760 aa19.55■□□□□ 0.72
CCM2-217ENST00000492883 PUS7Q96PZ0 661 aaKnown RBP19.55■□□□□ 0.72
CCM2-217ENST00000492883 SBNO1A3KN83 1393 aa19.55■□□□□ 0.72
CCM2-217ENST00000492883 MEX3CQ5U5Q3 659 aaKnown RBP19.54■□□□□ 0.72
CCM2-217ENST00000492883 PLEKHG5O94827 1062 aa19.53■□□□□ 0.72
CCM2-217ENST00000492883 CDCA8Q53HL2 280 aa19.53■□□□□ 0.72
CCM2-217ENST00000492883 POLR3AO14802 1390 aaPredicted RBP19.53■□□□□ 0.72
CCM2-217ENST00000492883 PHF23Q9BUL5 403 aaPredicted RBP19.52■□□□□ 0.72
CCM2-217ENST00000492883 RGPD8O14715 1765 aaPredicted RBP19.52■□□□□ 0.71
CCM2-217ENST00000492883 ZNF692Q9BU19 519 aaPredicted RBP19.51■□□□□ 0.71
CCM2-217ENST00000492883 DISP3Q9P2K9 1392 aa19.5■□□□□ 0.71
CCM2-217ENST00000492883 HAP1P54257 671 aaPredicted RBP19.5■□□□□ 0.71
CCM2-217ENST00000492883 SLC12A5Q9H2X9 1139 aa19.5■□□□□ 0.71
CCM2-217ENST00000492883 TNS3Q68CZ2 1445 aa19.5■□□□□ 0.71
CCM2-217ENST00000492883 ARHGEF10O15013 1369 aa19.49■□□□□ 0.71
CCM2-217ENST00000492883 ADAMTS2O95450 1211 aa19.49■□□□□ 0.71
CCM2-217ENST00000492883 HDGFL2Q7Z4V5 671 aaPredicted RBP19.48■□□□□ 0.71
CCM2-217ENST00000492883 ABTB2Q8N961 1025 aa19.47■□□□□ 0.71
CCM2-217ENST00000492883 CABLES1Q8TDN4 633 aa19.47■□□□□ 0.71
CCM2-217ENST00000492883 POLR3GLQ9BT43 218 aa19.47■□□□□ 0.71
CCM2-217ENST00000492883 TERF2IPQ9NYB0 399 aa19.47■□□□□ 0.71
CCM2-217ENST00000492883 ITSN1Q15811 1721 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms