RNA–Protein interactions for RNA: ENST00000492796.5

CDC42SE1-206, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 1,174 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-206ENST00000492796 ARHGEF28Q8N1W1 1705 aaKnown RBP15.39■□□□□ 0.05
CDC42SE1-206ENST00000492796 COL16A1Q07092 1604 aaPredicted RBP15.39■□□□□ 0.05
CDC42SE1-206ENST00000492796 NHSL1Q5SYE7 1610 aa15.39■□□□□ 0.05
CDC42SE1-206ENST00000492796 PLEKHH1Q9ULM0 1364 aa15.38■□□□□ 0.05
CDC42SE1-206ENST00000492796 FMN2Q9NZ56 1722 aa15.38■□□□□ 0.05
CDC42SE1-206ENST00000492796 ADGRB2O60241 1585 aa15.38■□□□□ 0.05
CDC42SE1-206ENST00000492796 WAPLQ7Z5K2 1190 aa15.38■□□□□ 0.05
CDC42SE1-206ENST00000492796 L3MBTL2Q969R5 705 aa15.38■□□□□ 0.05
CDC42SE1-206ENST00000492796 C1orf167Q5SNV9 1468 aa15.38■□□□□ 0.05
CDC42SE1-206ENST00000492796 NEUROD1Q13562 356 aa15.37■□□□□ 0.05
CDC42SE1-206ENST00000492796 BRINP3Q76B58 766 aa15.37■□□□□ 0.05
CDC42SE1-206ENST00000492796 TRPM1Q7Z4N2 1603 aa15.36■□□□□ 0.05
CDC42SE1-206ENST00000492796 PRAM1Q96QH2 718 aa15.35■□□□□ 0.05
CDC42SE1-206ENST00000492796 PCGF6Q9BYE7 350 aa15.35■□□□□ 0.05
CDC42SE1-206ENST00000492796 MED1Q15648 1581 aaPredicted RBP15.34■□□□□ 0.05
CDC42SE1-206ENST00000492796 TRAK1Q9UPV9 953 aa15.34■□□□□ 0.05
CDC42SE1-206ENST00000492796 POGKQ9P215 609 aa15.33■□□□□ 0.04
CDC42SE1-206ENST00000492796 TONSLQ96HA7 1378 aa15.33■□□□□ 0.04
CDC42SE1-206ENST00000492796 KIF1AQ12756 1690 aa15.32■□□□□ 0.04
CDC42SE1-206ENST00000492796 SHPRHQ149N8 1683 aa15.32■□□□□ 0.04
CDC42SE1-206ENST00000492796 JCADQ9P266 1359 aa15.31■□□□□ 0.04
CDC42SE1-206ENST00000492796 CLSPNQ9HAW4 1339 aa15.3■□□□□ 0.04
CDC42SE1-206ENST00000492796 ANKARQ7Z5J8 1434 aa15.29■□□□□ 0.04
CDC42SE1-206ENST00000492796 EIF3AQ14152 1382 aaKnown RBP15.29■□□□□ 0.04
CDC42SE1-206ENST00000492796 SAFB2Q14151 953 aaKnown RBP eCLIP15.29■□□□□ 0.04
CDC42SE1-206ENST00000492796 NBPF1Q3BBV0 1214 aa15.28■□□□□ 0.04
CDC42SE1-206ENST00000492796 ORAI2Q96SN7 254 aa15.28■□□□□ 0.04
CDC42SE1-206ENST00000492796 USP32Q8NFA0 1604 aa15.28■□□□□ 0.04
CDC42SE1-206ENST00000492796 TULP4Q9NRJ4 1543 aa15.27■□□□□ 0.04
CDC42SE1-206ENST00000492796 RGPD8O14715 1765 aaPredicted RBP15.27■□□□□ 0.04
CDC42SE1-206ENST00000492796 ROCK2O75116 1388 aaKnown RBP15.26■□□□□ 0.03
CDC42SE1-206ENST00000492796 QRICH2Q9H0J4 1663 aa15.26■□□□□ 0.03
CDC42SE1-206ENST00000492796 ESCO1Q5FWF5 840 aa15.26■□□□□ 0.03
CDC42SE1-206ENST00000492796 RALGAPBQ86X10 1494 aa15.26■□□□□ 0.03
CDC42SE1-206ENST00000492796 ITSN1Q15811 1721 aa15.26■□□□□ 0.03
CDC42SE1-206ENST00000492796 GPRASP1Q5JY77 1395 aa15.25■□□□□ 0.03
CDC42SE1-206ENST00000492796 NPHP3Q7Z494 1330 aa15.25■□□□□ 0.03
CDC42SE1-206ENST00000492796 MINK1Q8N4C8 1332 aaPredicted RBP15.25■□□□□ 0.03
CDC42SE1-206ENST00000492796 SOS2Q07890 1332 aaPredicted RBP15.24■□□□□ 0.03
CDC42SE1-206ENST00000492796 SPATA31A6Q5VVP1 1343 aa15.24■□□□□ 0.03
CDC42SE1-206ENST00000492796 NUTM2FA1L443 756 aa15.24■□□□□ 0.03
CDC42SE1-206ENST00000492796 LRRC59Q96AG4 307 aaKnown RBP15.24■□□□□ 0.03
CDC42SE1-206ENST00000492796 PXDNQ92626 1479 aa15.24■□□□□ 0.03
CDC42SE1-206ENST00000492796 CENPJQ9HC77 1338 aaPredicted RBP15.23■□□□□ 0.03
CDC42SE1-206ENST00000492796 WASLO00401 505 aaPredicted RBP15.23■□□□□ 0.03
CDC42SE1-206ENST00000492796 HIRIP3Q9BW71 556 aaPredicted RBP15.23■□□□□ 0.03
CDC42SE1-206ENST00000492796 NBPF8Q3BBV2 869 aa15.22■□□□□ 0.03
CDC42SE1-206ENST00000492796 DDX17Q92841 729 aaKnown RBP15.22■□□□□ 0.03
CDC42SE1-206ENST00000492796 COL22A1Q8NFW1 1626 aaPredicted RBP15.21■□□□□ 0.03
CDC42SE1-206ENST00000492796 ATP7BP35670 1465 aa15.21■□□□□ 0.03
CDC42SE1-206ENST00000492796 TOPAZ1Q8N9V7 1692 aa15.21■□□□□ 0.03
CDC42SE1-206ENST00000492796 PNPLA6Q8IY17 1366 aa15.21■□□□□ 0.02
CDC42SE1-206ENST00000492796 TIMELESSQ9UNS1 1208 aa15.2■□□□□ 0.02
CDC42SE1-206ENST00000492796 PHF8Q9UPP1 1060 aa15.2■□□□□ 0.02
CDC42SE1-206ENST00000492796 LRP6O75581 1613 aa15.2■□□□□ 0.02
CDC42SE1-206ENST00000492796 FOXO3O43524 673 aa15.19■□□□□ 0.02
CDC42SE1-206ENST00000492796 PRR36Q9H6K5 1346 aa15.17■□□□□ 0.02
CDC42SE1-206ENST00000492796 CARD11Q9BXL7 1154 aa15.17■□□□□ 0.02
CDC42SE1-206ENST00000492796 CDK19Q9BWU1 502 aa15.16■□□□□ 0.02
CDC42SE1-206ENST00000492796 TRPM3Q9HCF6 1732 aaPredicted RBP15.15■□□□□ 0.02
CDC42SE1-206ENST00000492796 SBNO2Q9Y2G9 1366 aa15.15■□□□□ 0.02
CDC42SE1-206ENST00000492796 CCER1Q8TC90 406 aaPredicted RBP15.15■□□□□ 0.02
CDC42SE1-206ENST00000492796 NUDT16Q96DE0 195 aaKnown RBP15.15■□□□□ 0.02
CDC42SE1-206ENST00000492796 TNS3Q68CZ2 1445 aa15.15■□□□□ 0.02
CDC42SE1-206ENST00000492796 SBNO1A3KN83 1393 aa15.14■□□□□ 0.01
CDC42SE1-206ENST00000492796 XPCQ01831 940 aaPredicted RBP15.14■□□□□ 0.01
CDC42SE1-206ENST00000492796 PSME1Q06323 249 aa15.14■□□□□ 0.01
CDC42SE1-206ENST00000492796 KRT28Q7Z3Y7 464 aa15.14■□□□□ 0.01
CDC42SE1-206ENST00000492796 MEX3CQ5U5Q3 659 aaKnown RBP15.13■□□□□ 0.01
CDC42SE1-206ENST00000492796 PMFBP1Q8TBY8 1022 aa15.13■□□□□ 0.01
CDC42SE1-206ENST00000492796 SPATA31A3Q5VYP0 1347 aa15.13■□□□□ 0.01
CDC42SE1-206ENST00000492796 EVC2Q86UK5 1308 aa15.13■□□□□ 0.01
CDC42SE1-206ENST00000492796 SRPK2P78362 688 aaKnown RBP15.12■□□□□ 0.01
CDC42SE1-206ENST00000492796 CCDC61Q9Y6R9 512 aa15.12■□□□□ 0.01
CDC42SE1-206ENST00000492796 ALS2Q96Q42 1657 aa15.12■□□□□ 0.01
CDC42SE1-206ENST00000492796 MARF1Q9Y4F3 1742 aaKnown RBP15.12■□□□□ 0.01
CDC42SE1-206ENST00000492796 POLR3AO14802 1390 aaPredicted RBP15.11■□□□□ 0.01
CDC42SE1-206ENST00000492796 ARHGEF10O15013 1369 aa15.11■□□□□ 0.01
CDC42SE1-206ENST00000492796 NUTM2BA6NNL0 878 aaPredicted RBP15.11■□□□□ 0.01
CDC42SE1-206ENST00000492796 NUTM2EB1AL46 878 aaPredicted RBP15.11■□□□□ 0.01
CDC42SE1-206ENST00000492796 NUTM2AQ8IVF1 878 aaPredicted RBP15.11■□□□□ 0.01
CDC42SE1-206ENST00000492796 PPIP5K1Q6PFW1 1433 aa15.1■□□□□ 0.01
CDC42SE1-206ENST00000492796 ABCA3Q99758 1704 aa15.1■□□□□ 0.01
CDC42SE1-206ENST00000492796 NGDNQ8NEJ9 315 aaKnown RBP15.1■□□□□ 0.01
CDC42SE1-206ENST00000492796 PLEKHG3A1L390 1219 aa15.09■□□□□ 0.01
CDC42SE1-206ENST00000492796 RGS17Q9UGC6 210 aaPredicted RBP15.09■□□□□ 0.01
CDC42SE1-206ENST00000492796 CABP2Q9NPB3 220 aa15.08■□□□□ 0
CDC42SE1-206ENST00000492796 ATAD2Q6PL18 1390 aa15.07■□□□□ 0
CDC42SE1-206ENST00000492796 SLC24A1O60721 1099 aa15.06■□□□□ 0
CDC42SE1-206ENST00000492796 ZNF772Q68DY9 489 aaPredicted RBP15.06■□□□□ 0
CDC42SE1-206ENST00000492796 ACEP12821 1306 aa15.06■□□□□ 0
CDC42SE1-206ENST00000492796 BRD4O60885 1362 aaPredicted RBP15.06■□□□□ 0
CDC42SE1-206ENST00000492796 CRYBG1Q9Y4K1 1723 aa15.06■□□□□ 0
CDC42SE1-206ENST00000492796 USP47Q96K76 1375 aa15.05■□□□□ -0
CDC42SE1-206ENST00000492796 AKAP12Q02952 1782 aa15.05■□□□□ -0
CDC42SE1-206ENST00000492796 ADAMTS2O95450 1211 aa15.04■□□□□ -0
CDC42SE1-206ENST00000492796 C8orf37Q96NL8 207 aa15.04■□□□□ -0
CDC42SE1-206ENST00000492796 AFF2P51816 1311 aa15.03■□□□□ -0
CDC42SE1-206ENST00000492796 LMOD2Q6P5Q4 547 aa15.03■□□□□ -0
CDC42SE1-206ENST00000492796 PHRF1Q9P1Y6 1649 aaKnown RBP15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms