RNA–Protein interactions for RNA: ENST00000492496.1

PKP4-214, Transcript of plakophilin 4, humanhuman

TSL 3

Gene PKP4, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-214ENST00000492496 WAPLQ7Z5K2 1190 aa23.14■■□□□ 1.29
PKP4-214ENST00000492496 NHSL1Q5SYE7 1610 aa23.14■■□□□ 1.29
PKP4-214ENST00000492496 C1orf167Q5SNV9 1468 aa23.13■■□□□ 1.29
PKP4-214ENST00000492496 PLEKHH1Q9ULM0 1364 aa23.12■■□□□ 1.29
PKP4-214ENST00000492496 FMN2Q9NZ56 1722 aa23.08■■□□□ 1.29
PKP4-214ENST00000492496 JCADQ9P266 1359 aa23.08■■□□□ 1.29
PKP4-214ENST00000492496 SHPRHQ149N8 1683 aa23.06■■□□□ 1.28
PKP4-214ENST00000492496 SIN3AQ96ST3 1273 aa23.06■■□□□ 1.28
PKP4-214ENST00000492496 PRAM1Q96QH2 718 aa23.05■■□□□ 1.28
PKP4-214ENST00000492496 TRAK1Q9UPV9 953 aa23.04■■□□□ 1.28
PKP4-214ENST00000492496 ARHGEF28Q8N1W1 1705 aaKnown RBP23.04■■□□□ 1.28
PKP4-214ENST00000492496 L3MBTL2Q969R5 705 aa23.03■■□□□ 1.28
PKP4-214ENST00000492496 POGKQ9P215 609 aa23.03■■□□□ 1.28
PKP4-214ENST00000492496 ADGRB2O60241 1585 aa23.02■■□□□ 1.28
PKP4-214ENST00000492496 ORAI2Q96SN7 254 aa23.02■■□□□ 1.28
PKP4-214ENST00000492496 NEUROD1Q13562 356 aa23.01■■□□□ 1.27
PKP4-214ENST00000492496 RGPD8O14715 1765 aaPredicted RBP22.99■■□□□ 1.27
PKP4-214ENST00000492496 SAFB2Q14151 953 aaKnown RBP eCLIP22.99■■□□□ 1.27
PKP4-214ENST00000492496 SPATA31A6Q5VVP1 1343 aa22.99■■□□□ 1.27
PKP4-214ENST00000492496 KIF1AQ12756 1690 aa22.98■■□□□ 1.27
PKP4-214ENST00000492496 ESCO1Q5FWF5 840 aa22.98■■□□□ 1.27
PKP4-214ENST00000492496 LRRC59Q96AG4 307 aaKnown RBP22.98■■□□□ 1.27
PKP4-214ENST00000492496 DDX17Q92841 729 aaKnown RBP22.97■■□□□ 1.27
PKP4-214ENST00000492496 SOS2Q07890 1332 aaPredicted RBP22.96■■□□□ 1.27
PKP4-214ENST00000492496 TRPM1Q7Z4N2 1603 aa22.96■■□□□ 1.27
PKP4-214ENST00000492496 NUTM2FA1L443 756 aa22.95■■□□□ 1.26
PKP4-214ENST00000492496 NPHP3Q7Z494 1330 aa22.94■■□□□ 1.26
PKP4-214ENST00000492496 NBPF1Q3BBV0 1214 aa22.94■■□□□ 1.26
PKP4-214ENST00000492496 ANKARQ7Z5J8 1434 aa22.93■■□□□ 1.26
PKP4-214ENST00000492496 ILDR2Q71H61 639 aa22.93■■□□□ 1.26
PKP4-214ENST00000492496 EIF3AQ14152 1382 aaKnown RBP22.92■■□□□ 1.26
PKP4-214ENST00000492496 MINK1Q8N4C8 1332 aaPredicted RBP22.92■■□□□ 1.26
PKP4-214ENST00000492496 USP32Q8NFA0 1604 aa22.92■■□□□ 1.26
PKP4-214ENST00000492496 PXDNQ92626 1479 aa22.91■■□□□ 1.26
PKP4-214ENST00000492496 PNPLA6Q8IY17 1366 aa22.9■■□□□ 1.26
PKP4-214ENST00000492496 LRP6O75581 1613 aa22.9■■□□□ 1.26
PKP4-214ENST00000492496 TULP4Q9NRJ4 1543 aa22.89■■□□□ 1.26
PKP4-214ENST00000492496 FOXO3O43524 673 aa22.89■■□□□ 1.25
PKP4-214ENST00000492496 HIRIP3Q9BW71 556 aaPredicted RBP22.89■■□□□ 1.25
PKP4-214ENST00000492496 WASLO00401 505 aaPredicted RBP22.88■■□□□ 1.25
PKP4-214ENST00000492496 TONSLQ96HA7 1378 aa22.88■■□□□ 1.25
PKP4-214ENST00000492496 COL22A1Q8NFW1 1626 aaPredicted RBP22.87■■□□□ 1.25
PKP4-214ENST00000492496 PHF8Q9UPP1 1060 aa22.87■■□□□ 1.25
PKP4-214ENST00000492496 RGS17Q9UGC6 210 aaPredicted RBP22.86■■□□□ 1.25
PKP4-214ENST00000492496 ITSN1Q15811 1721 aa22.85■■□□□ 1.25
PKP4-214ENST00000492496 MEX3CQ5U5Q3 659 aaKnown RBP22.84■■□□□ 1.25
PKP4-214ENST00000492496 QRICH2Q9H0J4 1663 aa22.84■■□□□ 1.25
PKP4-214ENST00000492496 PCGF6Q9BYE7 350 aa22.83■■□□□ 1.25
PKP4-214ENST00000492496 ROCK2O75116 1388 aaKnown RBP22.83■■□□□ 1.25
PKP4-214ENST00000492496 NUTM2BA6NNL0 878 aaPredicted RBP22.82■■□□□ 1.24
PKP4-214ENST00000492496 NUTM2EB1AL46 878 aaPredicted RBP22.82■■□□□ 1.24
PKP4-214ENST00000492496 NUTM2AQ8IVF1 878 aaPredicted RBP22.82■■□□□ 1.24
PKP4-214ENST00000492496 CENPJQ9HC77 1338 aaPredicted RBP22.82■■□□□ 1.24
PKP4-214ENST00000492496 XPCQ01831 940 aaPredicted RBP22.81■■□□□ 1.24
PKP4-214ENST00000492496 NBPF8Q3BBV2 869 aa22.81■■□□□ 1.24
PKP4-214ENST00000492496 PRR36Q9H6K5 1346 aa22.81■■□□□ 1.24
PKP4-214ENST00000492496 KRT28Q7Z3Y7 464 aa22.8■■□□□ 1.24
PKP4-214ENST00000492496 GPRASP1Q5JY77 1395 aa22.79■■□□□ 1.24
PKP4-214ENST00000492496 PSME1Q06323 249 aa22.79■■□□□ 1.24
PKP4-214ENST00000492496 ATP7BP35670 1465 aa22.79■■□□□ 1.24
PKP4-214ENST00000492496 CDK19Q9BWU1 502 aa22.78■■□□□ 1.24
PKP4-214ENST00000492496 SPATA31A3Q5VYP0 1347 aa22.78■■□□□ 1.24
PKP4-214ENST00000492496 TOPAZ1Q8N9V7 1692 aa22.77■■□□□ 1.24
PKP4-214ENST00000492496 PMFBP1Q8TBY8 1022 aa22.77■■□□□ 1.24
PKP4-214ENST00000492496 NUDT16Q96DE0 195 aaKnown RBP22.77■■□□□ 1.24
PKP4-214ENST00000492496 RALGAPBQ86X10 1494 aa22.77■■□□□ 1.24
PKP4-214ENST00000492496 CLSPNQ9HAW4 1339 aa22.77■■□□□ 1.24
PKP4-214ENST00000492496 SBNO1A3KN83 1393 aa22.76■■□□□ 1.23
PKP4-214ENST00000492496 MARF1Q9Y4F3 1742 aaKnown RBP22.76■■□□□ 1.23
PKP4-214ENST00000492496 TNS3Q68CZ2 1445 aa22.75■■□□□ 1.23
PKP4-214ENST00000492496 TRPM3Q9HCF6 1732 aaPredicted RBP22.75■■□□□ 1.23
PKP4-214ENST00000492496 ZNF772Q68DY9 489 aaPredicted RBP22.74■■□□□ 1.23
PKP4-214ENST00000492496 POTEAQ6S8J7 498 aa22.74■■□□□ 1.23
PKP4-214ENST00000492496 SOCS7O14512 581 aa22.73■■□□□ 1.23
PKP4-214ENST00000492496 NGDNQ8NEJ9 315 aaKnown RBP22.71■■□□□ 1.23
PKP4-214ENST00000492496 CCDC61Q9Y6R9 512 aa22.71■■□□□ 1.23
PKP4-214ENST00000492496 ARHGEF10O15013 1369 aa22.71■■□□□ 1.23
PKP4-214ENST00000492496 ALS2Q96Q42 1657 aa22.71■■□□□ 1.23
PKP4-214ENST00000492496 C8orf37Q96NL8 207 aa22.7■■□□□ 1.22
PKP4-214ENST00000492496 CARD11Q9BXL7 1154 aa22.7■■□□□ 1.22
PKP4-214ENST00000492496 AFF2P51816 1311 aa22.69■■□□□ 1.22
PKP4-214ENST00000492496 ADAMTS2O95450 1211 aa22.69■■□□□ 1.22
PKP4-214ENST00000492496 SRPK2P78362 688 aaKnown RBP22.69■■□□□ 1.22
PKP4-214ENST00000492496 EVC2Q86UK5 1308 aa22.68■■□□□ 1.22
PKP4-214ENST00000492496 ABCA3Q99758 1704 aa22.68■■□□□ 1.22
PKP4-214ENST00000492496 POLR3AO14802 1390 aaPredicted RBP22.67■■□□□ 1.22
PKP4-214ENST00000492496 PLEKHG3A1L390 1219 aa22.67■■□□□ 1.22
PKP4-214ENST00000492496 TIMELESSQ9UNS1 1208 aa22.67■■□□□ 1.22
PKP4-214ENST00000492496 SBNO2Q9Y2G9 1366 aa22.66■■□□□ 1.22
PKP4-214ENST00000492496 NGLY1Q96IV0 654 aa22.66■■□□□ 1.22
PKP4-214ENST00000492496 CABP2Q9NPB3 220 aa22.65■■□□□ 1.22
PKP4-214ENST00000492496 PPIP5K1Q6PFW1 1433 aa22.64■■□□□ 1.21
PKP4-214ENST00000492496 ACEP12821 1306 aa22.63■■□□□ 1.21
PKP4-214ENST00000492496 LMOD2Q6P5Q4 547 aa22.63■■□□□ 1.21
PKP4-214ENST00000492496 FNBP4Q8N3X1 1017 aaPredicted RBP22.62■■□□□ 1.21
PKP4-214ENST00000492496 CRYBG1Q9Y4K1 1723 aa22.6■■□□□ 1.21
PKP4-214ENST00000492496 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.6■■□□□ 1.21
PKP4-214ENST00000492496 PAK3O75914 559 aaPredicted RBP22.59■■□□□ 1.21
PKP4-214ENST00000492496 HAP1P54257 671 aaPredicted RBP22.59■■□□□ 1.21
PKP4-214ENST00000492496 USP21Q9UK80 565 aa22.59■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms