RNA–Protein interactions for RNA: ENST00000492462.1

MDC1-207, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 819 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-207ENST00000492462 C1orf167Q5SNV9 1468 aa17.29■□□□□ 0.36
MDC1-207ENST00000492462 KDM2AQ9Y2K7 1162 aa17.28■□□□□ 0.36
MDC1-207ENST00000492462 LAMC1P11047 1609 aa17.28■□□□□ 0.36
MDC1-207ENST00000492462 DHX57Q6P158 1386 aaKnown RBP17.28■□□□□ 0.36
MDC1-207ENST00000492462 ORAI2Q96SN7 254 aa17.27■□□□□ 0.36
MDC1-207ENST00000492462 DCAF11Q8TEB1 546 aa17.26■□□□□ 0.35
MDC1-207ENST00000492462 CDC42BPGQ6DT37 1551 aa17.25■□□□□ 0.35
MDC1-207ENST00000492462 ZNF772Q68DY9 489 aaPredicted RBP17.25■□□□□ 0.35
MDC1-207ENST00000492462 SHPRHQ149N8 1683 aa17.25■□□□□ 0.35
MDC1-207ENST00000492462 LRP6O75581 1613 aa17.25■□□□□ 0.35
MDC1-207ENST00000492462 ADGRB1O14514 1584 aa17.23■□□□□ 0.35
MDC1-207ENST00000492462 NUTM2FA1L443 756 aa17.22■□□□□ 0.35
MDC1-207ENST00000492462 RXRBP28702 533 aa17.21■□□□□ 0.35
MDC1-207ENST00000492462 SAFB2Q14151 953 aaKnown RBP eCLIP17.2■□□□□ 0.34
MDC1-207ENST00000492462 SIRT1Q96EB6 747 aa17.2■□□□□ 0.34
MDC1-207ENST00000492462 FMN2Q9NZ56 1722 aa17.2■□□□□ 0.34
MDC1-207ENST00000492462 SPATA31A6Q5VVP1 1343 aa17.2■□□□□ 0.34
MDC1-207ENST00000492462 PRAM1Q96QH2 718 aa17.19■□□□□ 0.34
MDC1-207ENST00000492462 DLC1Q96QB1 1528 aa17.18■□□□□ 0.34
MDC1-207ENST00000492462 NUTM2BA6NNL0 878 aaPredicted RBP17.18■□□□□ 0.34
MDC1-207ENST00000492462 NUTM2EB1AL46 878 aaPredicted RBP17.18■□□□□ 0.34
MDC1-207ENST00000492462 ESCO1Q5FWF5 840 aa17.18■□□□□ 0.34
MDC1-207ENST00000492462 NUTM2AQ8IVF1 878 aaPredicted RBP17.18■□□□□ 0.34
MDC1-207ENST00000492462 CDK12Q9NYV4 1490 aaPredicted RBP17.18■□□□□ 0.34
MDC1-207ENST00000492462 RGPD8O14715 1765 aaPredicted RBP17.17■□□□□ 0.34
MDC1-207ENST00000492462 PNPLA6Q8IY17 1366 aa17.17■□□□□ 0.34
MDC1-207ENST00000492462 LRRC59Q96AG4 307 aaKnown RBP17.17■□□□□ 0.34
MDC1-207ENST00000492462 TRAK1Q9UPV9 953 aa17.17■□□□□ 0.34
MDC1-207ENST00000492462 SOS2Q07890 1332 aaPredicted RBP17.17■□□□□ 0.34
MDC1-207ENST00000492462 MEX3CQ5U5Q3 659 aaKnown RBP17.16■□□□□ 0.34
MDC1-207ENST00000492462 ZRANB1Q9UGI0 708 aa17.16■□□□□ 0.34
MDC1-207ENST00000492462 XPCQ01831 940 aaPredicted RBP17.15■□□□□ 0.34
MDC1-207ENST00000492462 STAC3Q96MF2 364 aa17.15■□□□□ 0.34
MDC1-207ENST00000492462 SIN3AQ96ST3 1273 aa17.15■□□□□ 0.34
MDC1-207ENST00000492462 FOXO3O43524 673 aa17.14■□□□□ 0.33
MDC1-207ENST00000492462 POGKQ9P215 609 aa17.14■□□□□ 0.33
MDC1-207ENST00000492462 PXDNQ92626 1479 aa17.13■□□□□ 0.33
MDC1-207ENST00000492462 HIRIP3Q9BW71 556 aaPredicted RBP17.12■□□□□ 0.33
MDC1-207ENST00000492462 ARHGEF28Q8N1W1 1705 aaKnown RBP17.12■□□□□ 0.33
MDC1-207ENST00000492462 USP32Q8NFA0 1604 aa17.11■□□□□ 0.33
MDC1-207ENST00000492462 NPHP3Q7Z494 1330 aa17.11■□□□□ 0.33
MDC1-207ENST00000492462 MINK1Q8N4C8 1332 aaPredicted RBP17.11■□□□□ 0.33
MDC1-207ENST00000492462 ADGRB2O60241 1585 aa17.11■□□□□ 0.33
MDC1-207ENST00000492462 NBPF1Q3BBV0 1214 aa17.1■□□□□ 0.33
MDC1-207ENST00000492462 KIAA1210Q9ULL0 1709 aa17.1■□□□□ 0.33
MDC1-207ENST00000492462 L3MBTL2Q969R5 705 aa17.09■□□□□ 0.33
MDC1-207ENST00000492462 KIF1AQ12756 1690 aa17.09■□□□□ 0.33
MDC1-207ENST00000492462 NEUROD1Q13562 356 aa17.08■□□□□ 0.32
MDC1-207ENST00000492462 COL22A1Q8NFW1 1626 aaPredicted RBP17.07■□□□□ 0.32
MDC1-207ENST00000492462 ADAMTS2O95450 1211 aa17.07■□□□□ 0.32
MDC1-207ENST00000492462 PHF8Q9UPP1 1060 aa17.07■□□□□ 0.32
MDC1-207ENST00000492462 AFF2P51816 1311 aa17.06■□□□□ 0.32
MDC1-207ENST00000492462 PRR36Q9H6K5 1346 aa17.06■□□□□ 0.32
MDC1-207ENST00000492462 TRIM26Q12899 539 aaPredicted RBP17.06■□□□□ 0.32
MDC1-207ENST00000492462 RGS12O14924 1447 aa17.05■□□□□ 0.32
MDC1-207ENST00000492462 C8orf37Q96NL8 207 aa17.05■□□□□ 0.32
MDC1-207ENST00000492462 WASLO00401 505 aaPredicted RBP17.04■□□□□ 0.32
MDC1-207ENST00000492462 KRT28Q7Z3Y7 464 aa17.04■□□□□ 0.32
MDC1-207ENST00000492462 PMFBP1Q8TBY8 1022 aa17.04■□□□□ 0.32
MDC1-207ENST00000492462 ANKARQ7Z5J8 1434 aa17.04■□□□□ 0.32
MDC1-207ENST00000492462 SPATA31A3Q5VYP0 1347 aa17.02■□□□□ 0.32
MDC1-207ENST00000492462 TULP4Q9NRJ4 1543 aa17.02■□□□□ 0.32
MDC1-207ENST00000492462 NGLY1Q96IV0 654 aa17■□□□□ 0.31
MDC1-207ENST00000492462 TRPM1Q7Z4N2 1603 aa16.99■□□□□ 0.31
MDC1-207ENST00000492462 MARF1Q9Y4F3 1742 aaKnown RBP16.99■□□□□ 0.31
MDC1-207ENST00000492462 ATP7BP35670 1465 aa16.99■□□□□ 0.31
MDC1-207ENST00000492462 PLEKHG5O94827 1062 aa16.98■□□□□ 0.31
MDC1-207ENST00000492462 PSME1Q06323 249 aa16.98■□□□□ 0.31
MDC1-207ENST00000492462 EIF3AQ14152 1382 aaKnown RBP16.98■□□□□ 0.31
MDC1-207ENST00000492462 TRPM3Q9HCF6 1732 aaPredicted RBP16.98■□□□□ 0.31
MDC1-207ENST00000492462 TNS3Q68CZ2 1445 aa16.97■□□□□ 0.31
MDC1-207ENST00000492462 NBPF8Q3BBV2 869 aa16.97■□□□□ 0.31
MDC1-207ENST00000492462 CABLES1Q8TDN4 633 aa16.97■□□□□ 0.31
MDC1-207ENST00000492462 CDK19Q9BWU1 502 aa16.97■□□□□ 0.31
MDC1-207ENST00000492462 ATAD2Q6PL18 1390 aa16.97■□□□□ 0.31
MDC1-207ENST00000492462 RBM6P78332 1123 aaKnown RBP16.96■□□□□ 0.31
MDC1-207ENST00000492462 NUDT16Q96DE0 195 aaKnown RBP16.96■□□□□ 0.31
MDC1-207ENST00000492462 QTRT2Q9H974 415 aaKnown RBP16.96■□□□□ 0.31
MDC1-207ENST00000492462 SBNO1A3KN83 1393 aa16.96■□□□□ 0.31
MDC1-207ENST00000492462 EP400Q96L91 3159 aa16.96■□□□□ 0.31
MDC1-207ENST00000492462 QRICH2Q9H0J4 1663 aa16.95■□□□□ 0.3
MDC1-207ENST00000492462 LMOD2Q6P5Q4 547 aa16.95■□□□□ 0.3
MDC1-207ENST00000492462 ITSN1Q15811 1721 aa16.95■□□□□ 0.3
MDC1-207ENST00000492462 CENPJQ9HC77 1338 aaPredicted RBP16.95■□□□□ 0.3
MDC1-207ENST00000492462 ABCA3Q99758 1704 aa16.94■□□□□ 0.3
MDC1-207ENST00000492462 FNBP4Q8N3X1 1017 aaPredicted RBP16.94■□□□□ 0.3
MDC1-207ENST00000492462 USP21Q9UK80 565 aa16.94■□□□□ 0.3
MDC1-207ENST00000492462 TOPAZ1Q8N9V7 1692 aa16.94■□□□□ 0.3
MDC1-207ENST00000492462 NGDNQ8NEJ9 315 aaKnown RBP16.93■□□□□ 0.3
MDC1-207ENST00000492462 ALS2Q96Q42 1657 aa16.93■□□□□ 0.3
MDC1-207ENST00000492462 ROCK2O75116 1388 aaKnown RBP16.91■□□□□ 0.3
MDC1-207ENST00000492462 GPRASP1Q5JY77 1395 aa16.91■□□□□ 0.3
MDC1-207ENST00000492462 IFFO2Q5TF58 517 aa16.91■□□□□ 0.3
MDC1-207ENST00000492462 BCL9LQ86UU0 1499 aa16.91■□□□□ 0.3
MDC1-207ENST00000492462 ARHGEF10O15013 1369 aa16.9■□□□□ 0.3
MDC1-207ENST00000492462 CABP2Q9NPB3 220 aa16.9■□□□□ 0.3
MDC1-207ENST00000492462 LRP5O75197 1615 aa16.89■□□□□ 0.29
MDC1-207ENST00000492462 ATRNO75882 1429 aa16.89■□□□□ 0.29
MDC1-207ENST00000492462 CCDC61Q9Y6R9 512 aa16.89■□□□□ 0.29
MDC1-207ENST00000492462 TONSLQ96HA7 1378 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms