RNA–Protein interactions for RNA: ENST00000490391.1

PDLIM1-203, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 458 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-203ENST00000490391 NKTRP30414 1462 aaKnown RBP11.79□□□□□ -0.52
PDLIM1-203ENST00000490391 CCDC141Q6ZP82 1450 aa11.79□□□□□ -0.52
PDLIM1-203ENST00000490391 KCNA6P17658 529 aa11.79□□□□□ -0.52
PDLIM1-203ENST00000490391 RXRBP28702 533 aa11.79□□□□□ -0.52
PDLIM1-203ENST00000490391 TET3O43151 1660 aa11.78□□□□□ -0.52
PDLIM1-203ENST00000490391 CFAP65Q6ZU64 1925 aaKnown RBP11.78□□□□□ -0.52
PDLIM1-203ENST00000490391 SLAIN2Q9P270 581 aa11.78□□□□□ -0.52
PDLIM1-203ENST00000490391 RGS12O14924 1447 aa11.77□□□□□ -0.52
PDLIM1-203ENST00000490391 POTEB3A0JP26 581 aa11.77□□□□□ -0.53
PDLIM1-203ENST00000490391 POTEBQ6S5H4 581 aa11.77□□□□□ -0.53
PDLIM1-203ENST00000490391 PROSER2Q86WR7 435 aaPredicted RBP11.77□□□□□ -0.53
PDLIM1-203ENST00000490391 TMEM2Q9UHN6 1383 aa11.77□□□□□ -0.53
PDLIM1-203ENST00000490391 HS3ST6Q96QI5 342 aa11.76□□□□□ -0.53
PDLIM1-203ENST00000490391 MSH6P52701 1360 aa11.76□□□□□ -0.53
PDLIM1-203ENST00000490391 SETBP1Q9Y6X0 1596 aa11.75□□□□□ -0.53
PDLIM1-203ENST00000490391 AHDC1Q5TGY3 1603 aaPredicted RBP11.75□□□□□ -0.53
PDLIM1-203ENST00000490391 CEP152O94986 1710 aa11.75□□□□□ -0.53
PDLIM1-203ENST00000490391 MEX3CQ5U5Q3 659 aaKnown RBP11.75□□□□□ -0.53
PDLIM1-203ENST00000490391 PIK3C2BO00750 1634 aa11.75□□□□□ -0.53
PDLIM1-203ENST00000490391 KDM5AP29375 1690 aaKnown RBP11.75□□□□□ -0.53
PDLIM1-203ENST00000490391 EID1Q9Y6B2 187 aa11.74□□□□□ -0.53
PDLIM1-203ENST00000490391 DIP2AQ14689 1571 aa11.74□□□□□ -0.53
PDLIM1-203ENST00000490391 EIF2AK4Q9P2K8 1649 aaKnown RBP11.73□□□□□ -0.53
PDLIM1-203ENST00000490391 ARHGAP31Q2M1Z3 1444 aa11.72□□□□□ -0.53
PDLIM1-203ENST00000490391 MTUS2Q5JR59 1369 aa11.72□□□□□ -0.53
PDLIM1-203ENST00000490391 FAM205CA6NFA0 338 aa11.72□□□□□ -0.53
PDLIM1-203ENST00000490391 SLC26A8Q96RN1 970 aa11.72□□□□□ -0.53
PDLIM1-203ENST00000490391 ARHGEF5Q12774 1597 aa11.71□□□□□ -0.53
PDLIM1-203ENST00000490391 AFF2P51816 1311 aa11.71□□□□□ -0.53
PDLIM1-203ENST00000490391 CEP162Q5TB80 1403 aa11.7□□□□□ -0.54
PDLIM1-203ENST00000490391 C3orf67Q6ZVT6 689 aa11.7□□□□□ -0.54
PDLIM1-203ENST00000490391 EFCAB6Q5THR3 1501 aa11.7□□□□□ -0.54
PDLIM1-203ENST00000490391 EHBP1L1Q8N3D4 1523 aa11.7□□□□□ -0.54
PDLIM1-203ENST00000490391 RSPH4AQ5TD94 716 aa11.69□□□□□ -0.54
PDLIM1-203ENST00000490391 PDCD7Q8N8D1 485 aaKnown RBP11.69□□□□□ -0.54
PDLIM1-203ENST00000490391 MAST1Q9Y2H9 1570 aa11.69□□□□□ -0.54
PDLIM1-203ENST00000490391 CHD2O14647 1828 aaKnown RBP11.69□□□□□ -0.54
PDLIM1-203ENST00000490391 RBM6P78332 1123 aaKnown RBP11.68□□□□□ -0.54
PDLIM1-203ENST00000490391 L3MBTL3Q96JM7 780 aaPredicted RBP11.67□□□□□ -0.54
PDLIM1-203ENST00000490391 ATAD2Q6PL18 1390 aa11.67□□□□□ -0.54
PDLIM1-203ENST00000490391 PYGBP11216 843 aa11.66□□□□□ -0.54
PDLIM1-203ENST00000490391 NCOA3Q9Y6Q9 1424 aa11.66□□□□□ -0.54
PDLIM1-203ENST00000490391 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.66□□□□□ -0.54
PDLIM1-203ENST00000490391 NUTM2BA6NNL0 878 aaPredicted RBP11.65□□□□□ -0.54
PDLIM1-203ENST00000490391 NUTM2EB1AL46 878 aaPredicted RBP11.65□□□□□ -0.54
PDLIM1-203ENST00000490391 NUTM2DQ5VT03 806 aaPredicted RBP11.65□□□□□ -0.54
PDLIM1-203ENST00000490391 NUTM2AQ8IVF1 878 aaPredicted RBP11.65□□□□□ -0.54
PDLIM1-203ENST00000490391 QTRT2Q9H974 415 aaKnown RBP11.65□□□□□ -0.54
PDLIM1-203ENST00000490391 PCDHB8Q9UN66 801 aa11.65□□□□□ -0.54
PDLIM1-203ENST00000490391 SETD5Q9C0A6 1442 aa11.64□□□□□ -0.55
PDLIM1-203ENST00000490391 TSPY4P0CV99 314 aa11.63□□□□□ -0.55
PDLIM1-203ENST00000490391 TSPY10P0CW01 314 aa11.63□□□□□ -0.55
PDLIM1-203ENST00000490391 IDI1Q13907 227 aa11.63□□□□□ -0.55
PDLIM1-203ENST00000490391 ADGRB3O60242 1522 aa11.63□□□□□ -0.55
PDLIM1-203ENST00000490391 LRP5O75197 1615 aa11.62□□□□□ -0.55
PDLIM1-203ENST00000490391 BRINP3Q76B58 766 aa11.62□□□□□ -0.55
PDLIM1-203ENST00000490391 NHSL1Q5SYE7 1610 aa11.61□□□□□ -0.55
PDLIM1-203ENST00000490391 DCAF8Q5TAQ9 597 aa11.61□□□□□ -0.55
PDLIM1-203ENST00000490391 CADPS2Q86UW7 1296 aa11.61□□□□□ -0.55
PDLIM1-203ENST00000490391 C8orf37Q96NL8 207 aa11.61□□□□□ -0.55
PDLIM1-203ENST00000490391 ZFYVE9O95405 1425 aa11.6□□□□□ -0.55
PDLIM1-203ENST00000490391 ASXL1Q8IXJ9 1541 aa11.6□□□□□ -0.55
PDLIM1-203ENST00000490391 DUOX2Q9NRD8 1548 aa11.6□□□□□ -0.55
PDLIM1-203ENST00000490391 PLEKHG1Q9ULL1 1385 aa11.59□□□□□ -0.55
PDLIM1-203ENST00000490391 C19orf44Q9H6X5 657 aa11.59□□□□□ -0.55
PDLIM1-203ENST00000490391 NOS1P29475 1434 aa11.59□□□□□ -0.55
PDLIM1-203ENST00000490391 PNPLA6Q8IY17 1366 aa11.58□□□□□ -0.56
PDLIM1-203ENST00000490391 NGLY1Q96IV0 654 aa11.58□□□□□ -0.56
PDLIM1-203ENST00000490391 LMTK2Q8IWU2 1503 aa11.57□□□□□ -0.56
PDLIM1-203ENST00000490391 MKRN3Q13064 507 aaKnown RBP11.57□□□□□ -0.56
PDLIM1-203ENST00000490391 ATF3P18847 181 aa11.56□□□□□ -0.56
PDLIM1-203ENST00000490391 DCCP43146 1447 aa11.55□□□□□ -0.56
PDLIM1-203ENST00000490391 ADAMTS13Q76LX8 1427 aa11.55□□□□□ -0.56
PDLIM1-203ENST00000490391 ERBINQ96RT1 1412 aa11.55□□□□□ -0.56
PDLIM1-203ENST00000490391 GOLGA2Q08379 1002 aa11.55□□□□□ -0.56
PDLIM1-203ENST00000490391 C14orf37Q86TY3 774 aa11.55□□□□□ -0.56
PDLIM1-203ENST00000490391 CCDC125Q86Z20 511 aa11.55□□□□□ -0.56
PDLIM1-203ENST00000490391 TBX22Q9Y458 520 aa11.55□□□□□ -0.56
PDLIM1-203ENST00000490391 MYO5BQ9ULV0 1848 aa11.55□□□□□ -0.56
PDLIM1-203ENST00000490391 ATRNO75882 1429 aa11.54□□□□□ -0.56
PDLIM1-203ENST00000490391 MST1RQ04912 1400 aa11.54□□□□□ -0.56
PDLIM1-203ENST00000490391 LRRC59Q96AG4 307 aaKnown RBP11.54□□□□□ -0.56
PDLIM1-203ENST00000490391 BCANQ96GW7 911 aa11.54□□□□□ -0.56
PDLIM1-203ENST00000490391 RNF166Q96A37 237 aaPredicted RBP11.53□□□□□ -0.56
PDLIM1-203ENST00000490391 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.53□□□□□ -0.562e-7■□□□□ 9.4
PDLIM1-203ENST00000490391 PIK3R4Q99570 1358 aa11.53□□□□□ -0.56
PDLIM1-203ENST00000490391 KIF15Q9NS87 1388 aa11.53□□□□□ -0.56
PDLIM1-203ENST00000490391 RIMS2Q9UQ26 1411 aa11.52□□□□□ -0.56
PDLIM1-203ENST00000490391 TRPC5Q9UL62 973 aaPredicted RBP11.52□□□□□ -0.57
PDLIM1-203ENST00000490391 ADAMTS2O95450 1211 aa11.51□□□□□ -0.57
PDLIM1-203ENST00000490391 FNBP4Q8N3X1 1017 aaPredicted RBP11.51□□□□□ -0.57
PDLIM1-203ENST00000490391 DDX17Q92841 729 aaKnown RBP11.51□□□□□ -0.57
PDLIM1-203ENST00000490391 SLC52A1Q9NWF4 448 aa11.51□□□□□ -0.57
PDLIM1-203ENST00000490391 USP21Q9UK80 565 aa11.51□□□□□ -0.57
PDLIM1-203ENST00000490391 PTPRUQ92729 1446 aa11.51□□□□□ -0.57
PDLIM1-203ENST00000490391 TMEM131LA2VDJ0 1609 aa11.5□□□□□ -0.57
PDLIM1-203ENST00000490391 GCC2Q8IWJ2 1684 aa11.5□□□□□ -0.57
PDLIM1-203ENST00000490391 HOXB3P14651 431 aaPredicted RBP11.5□□□□□ -0.57
PDLIM1-203ENST00000490391 BLMP54132 1417 aaPredicted RBP11.5□□□□□ -0.57
PDLIM1-203ENST00000490391 BCL9LQ86UU0 1499 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms