RNA–Protein interactions for RNA: ENST00000489808.1

EPHB4-207, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-207ENST00000489808 ADGRB1O14514 1584 aa27.62■■■□□ 2.01
EPHB4-207ENST00000489808 SAFB2Q14151 953 aaKnown RBP eCLIP27.6■■■□□ 2.01
EPHB4-207ENST00000489808 JCADQ9P266 1359 aa27.59■■■□□ 2.01
EPHB4-207ENST00000489808 KNDC1Q76NI1 1749 aa27.58■■■□□ 2.01
EPHB4-207ENST00000489808 DDX17Q92841 729 aaKnown RBP27.58■■■□□ 2.01
EPHB4-207ENST00000489808 NUTM2FA1L443 756 aa27.57■■■□□ 2
EPHB4-207ENST00000489808 NBPF1Q3BBV0 1214 aa27.57■■■□□ 2
EPHB4-207ENST00000489808 ESCO1Q5FWF5 840 aa27.57■■■□□ 2
EPHB4-207ENST00000489808 DLC1Q96QB1 1528 aa27.57■■■□□ 2
EPHB4-207ENST00000489808 AHDC1Q5TGY3 1603 aaPredicted RBP27.56■■■□□ 2
EPHB4-207ENST00000489808 PHLPP1O60346 1717 aa27.55■■■□□ 2
EPHB4-207ENST00000489808 MED1Q15648 1581 aaPredicted RBP27.54■■■□□ 2
EPHB4-207ENST00000489808 CDC42BPGQ6DT37 1551 aa27.53■■■□□ 2
EPHB4-207ENST00000489808 LRRC59Q96AG4 307 aaKnown RBP27.53■■■□□ 2
EPHB4-207ENST00000489808 COL16A1Q07092 1604 aaPredicted RBP27.52■■■□□ 2
EPHB4-207ENST00000489808 PCGF6Q9BYE7 350 aa27.51■■□□□ 1.99
EPHB4-207ENST00000489808 PHF23Q9BUL5 403 aaPredicted RBP27.5■■□□□ 1.99
EPHB4-207ENST00000489808 ILDR2Q71H61 639 aa27.49■■□□□ 1.99
EPHB4-207ENST00000489808 SOS2Q07890 1332 aaPredicted RBP27.48■■□□□ 1.99
EPHB4-207ENST00000489808 MINK1Q8N4C8 1332 aaPredicted RBP27.48■■□□□ 1.99
EPHB4-207ENST00000489808 HIRIP3Q9BW71 556 aaPredicted RBP27.48■■□□□ 1.99
EPHB4-207ENST00000489808 SPATA31A6Q5VVP1 1343 aa27.47■■□□□ 1.99
EPHB4-207ENST00000489808 FOXO3O43524 673 aa27.47■■□□□ 1.99
EPHB4-207ENST00000489808 NPHP3Q7Z494 1330 aa27.44■■□□□ 1.98
EPHB4-207ENST00000489808 WASLO00401 505 aaPredicted RBP27.43■■□□□ 1.98
EPHB4-207ENST00000489808 NHSL1Q5SYE7 1610 aa27.42■■□□□ 1.98
EPHB4-207ENST00000489808 NBPF8Q3BBV2 869 aa27.42■■□□□ 1.98
EPHB4-207ENST00000489808 KIAA1210Q9ULL0 1709 aa27.41■■□□□ 1.98
EPHB4-207ENST00000489808 RGS17Q9UGC6 210 aaPredicted RBP27.41■■□□□ 1.98
EPHB4-207ENST00000489808 PHF8Q9UPP1 1060 aa27.41■■□□□ 1.98
EPHB4-207ENST00000489808 TONSLQ96HA7 1378 aa27.39■■□□□ 1.98
EPHB4-207ENST00000489808 NUTM2BA6NNL0 878 aaPredicted RBP27.38■■□□□ 1.97
EPHB4-207ENST00000489808 NUTM2EB1AL46 878 aaPredicted RBP27.38■■□□□ 1.97
EPHB4-207ENST00000489808 XPCQ01831 940 aaPredicted RBP27.38■■□□□ 1.97
EPHB4-207ENST00000489808 NUTM2AQ8IVF1 878 aaPredicted RBP27.38■■□□□ 1.97
EPHB4-207ENST00000489808 FMN2Q9NZ56 1722 aa27.38■■□□□ 1.97
EPHB4-207ENST00000489808 PNPLA6Q8IY17 1366 aa27.37■■□□□ 1.97
EPHB4-207ENST00000489808 ANKARQ7Z5J8 1434 aa27.36■■□□□ 1.97
EPHB4-207ENST00000489808 KRT28Q7Z3Y7 464 aa27.35■■□□□ 1.97
EPHB4-207ENST00000489808 PRR36Q9H6K5 1346 aa27.35■■□□□ 1.97
EPHB4-207ENST00000489808 ADGRB2O60241 1585 aa27.35■■□□□ 1.97
EPHB4-207ENST00000489808 EIF3AQ14152 1382 aaKnown RBP27.35■■□□□ 1.97
EPHB4-207ENST00000489808 MEX3CQ5U5Q3 659 aaKnown RBP27.34■■□□□ 1.97
EPHB4-207ENST00000489808 PMFBP1Q8TBY8 1022 aa27.34■■□□□ 1.97
EPHB4-207ENST00000489808 CDK19Q9BWU1 502 aa27.34■■□□□ 1.97
EPHB4-207ENST00000489808 ROCK2O75116 1388 aaKnown RBP27.34■■□□□ 1.97
EPHB4-207ENST00000489808 CENPJQ9HC77 1338 aaPredicted RBP27.33■■□□□ 1.97
EPHB4-207ENST00000489808 SHPRHQ149N8 1683 aa27.33■■□□□ 1.97
EPHB4-207ENST00000489808 LRP6O75581 1613 aa27.32■■□□□ 1.96
EPHB4-207ENST00000489808 PXDNQ92626 1479 aa27.32■■□□□ 1.96
EPHB4-207ENST00000489808 PSME1Q06323 249 aa27.31■■□□□ 1.96
EPHB4-207ENST00000489808 NUDT16Q96DE0 195 aaKnown RBP27.31■■□□□ 1.96
EPHB4-207ENST00000489808 ARHGEF28Q8N1W1 1705 aaKnown RBP27.3■■□□□ 1.96
EPHB4-207ENST00000489808 SPATA31A3Q5VYP0 1347 aa27.28■■□□□ 1.96
EPHB4-207ENST00000489808 POTEAQ6S8J7 498 aa27.27■■□□□ 1.96
EPHB4-207ENST00000489808 TULP4Q9NRJ4 1543 aa27.26■■□□□ 1.96
EPHB4-207ENST00000489808 GPRASP1Q5JY77 1395 aa27.26■■□□□ 1.95
EPHB4-207ENST00000489808 TRPM1Q7Z4N2 1603 aa27.26■■□□□ 1.95
EPHB4-207ENST00000489808 CLSPNQ9HAW4 1339 aa27.25■■□□□ 1.95
EPHB4-207ENST00000489808 CARD11Q9BXL7 1154 aa27.25■■□□□ 1.95
EPHB4-207ENST00000489808 USP32Q8NFA0 1604 aa27.24■■□□□ 1.95
EPHB4-207ENST00000489808 NGDNQ8NEJ9 315 aaKnown RBP27.24■■□□□ 1.95
EPHB4-207ENST00000489808 CCDC61Q9Y6R9 512 aa27.24■■□□□ 1.95
EPHB4-207ENST00000489808 KIF1AQ12756 1690 aa27.24■■□□□ 1.95
EPHB4-207ENST00000489808 ADAMTS2O95450 1211 aa27.23■■□□□ 1.95
EPHB4-207ENST00000489808 RGPD8O14715 1765 aaPredicted RBP27.22■■□□□ 1.95
EPHB4-207ENST00000489808 SBNO1A3KN83 1393 aa27.22■■□□□ 1.95
EPHB4-207ENST00000489808 SRPK2P78362 688 aaKnown RBP27.21■■□□□ 1.95
EPHB4-207ENST00000489808 ZNF772Q68DY9 489 aaPredicted RBP27.21■■□□□ 1.95
EPHB4-207ENST00000489808 C8orf37Q96NL8 207 aa27.2■■□□□ 1.94
EPHB4-207ENST00000489808 CABP2Q9NPB3 220 aa27.2■■□□□ 1.94
EPHB4-207ENST00000489808 PLEKHG3A1L390 1219 aa27.19■■□□□ 1.94
EPHB4-207ENST00000489808 SOCS7O14512 581 aa27.19■■□□□ 1.94
EPHB4-207ENST00000489808 TIMELESSQ9UNS1 1208 aa27.19■■□□□ 1.94
EPHB4-207ENST00000489808 ATP7BP35670 1465 aa27.19■■□□□ 1.94
EPHB4-207ENST00000489808 LMOD2Q6P5Q4 547 aa27.17■■□□□ 1.94
EPHB4-207ENST00000489808 NGLY1Q96IV0 654 aa27.17■■□□□ 1.94
EPHB4-207ENST00000489808 AFF2P51816 1311 aa27.16■■□□□ 1.94
EPHB4-207ENST00000489808 RALGAPBQ86X10 1494 aa27.16■■□□□ 1.94
EPHB4-207ENST00000489808 EVC2Q86UK5 1308 aa27.16■■□□□ 1.94
EPHB4-207ENST00000489808 CCER1Q8TC90 406 aaPredicted RBP27.15■■□□□ 1.94
EPHB4-207ENST00000489808 TNS3Q68CZ2 1445 aa27.15■■□□□ 1.94
EPHB4-207ENST00000489808 ACEP12821 1306 aa27.14■■□□□ 1.93
EPHB4-207ENST00000489808 COL22A1Q8NFW1 1626 aaPredicted RBP27.12■■□□□ 1.93
EPHB4-207ENST00000489808 ARHGEF10O15013 1369 aa27.12■■□□□ 1.93
EPHB4-207ENST00000489808 PAK3O75914 559 aaPredicted RBP27.11■■□□□ 1.93
EPHB4-207ENST00000489808 FNBP4Q8N3X1 1017 aaPredicted RBP27.11■■□□□ 1.93
EPHB4-207ENST00000489808 CABLES1Q8TDN4 633 aa27.11■■□□□ 1.93
EPHB4-207ENST00000489808 POLR3AO14802 1390 aaPredicted RBP27.1■■□□□ 1.93
EPHB4-207ENST00000489808 CABP1Q9NZU7 370 aa27.1■■□□□ 1.93
EPHB4-207ENST00000489808 PLEKHG5O94827 1062 aa27.08■■□□□ 1.93
EPHB4-207ENST00000489808 QTRT2Q9H974 415 aaKnown RBP27.08■■□□□ 1.93
EPHB4-207ENST00000489808 HAP1P54257 671 aaPredicted RBP27.07■■□□□ 1.92
EPHB4-207ENST00000489808 QRICH2Q9H0J4 1663 aa27.07■■□□□ 1.92
EPHB4-207ENST00000489808 PPIP5K1Q6PFW1 1433 aa27.07■■□□□ 1.92
EPHB4-207ENST00000489808 RXRBP28702 533 aa27.06■■□□□ 1.92
EPHB4-207ENST00000489808 USP21Q9UK80 565 aa27.05■■□□□ 1.92
EPHB4-207ENST00000489808 SBNO2Q9Y2G9 1366 aa27.05■■□□□ 1.92
EPHB4-207ENST00000489808 ST20-MTHFSA0A0A6YYL1 179 aa27.02■■□□□ 1.92
EPHB4-207ENST00000489808 ITSN1Q15811 1721 aa27.01■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms