RNA–Protein interactions for RNA: ENST00000488848.1

USP11-209, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 2

Gene USP11, Length 904 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-209ENST00000488848 CDC42BPGQ6DT37 1551 aa14.9□□□□□ -0.02
USP11-209ENST00000488848 PRAM1Q96QH2 718 aa14.89□□□□□ -0.03
USP11-209ENST00000488848 SLC26A8Q96RN1 970 aa14.89□□□□□ -0.03
USP11-209ENST00000488848 EVC2Q86UK5 1308 aa14.88□□□□□ -0.03
USP11-209ENST00000488848 PLEKHH1Q9ULM0 1364 aa14.87□□□□□ -0.03
USP11-209ENST00000488848 KCNA6P17658 529 aa14.87□□□□□ -0.03
USP11-209ENST00000488848 DIEXFQ68CQ4 756 aaKnown RBP14.87□□□□□ -0.03
USP11-209ENST00000488848 AMOTL2Q9Y2J4 779 aa14.87□□□□□ -0.03
USP11-209ENST00000488848 NCKAP5LQ9HCH0 1330 aa14.87□□□□□ -0.03
USP11-209ENST00000488848 TOPAZ1Q8N9V7 1692 aa14.87□□□□□ -0.03
USP11-209ENST00000488848 ATAD2Q6PL18 1390 aa14.86□□□□□ -0.03
USP11-209ENST00000488848 USP32Q8NFA0 1604 aa14.85□□□□□ -0.03
USP11-209ENST00000488848 ILDR2Q71H61 639 aa14.85□□□□□ -0.03
USP11-209ENST00000488848 STRCP1A6NGW2 1772 aa14.85□□□□□ -0.03
USP11-209ENST00000488848 ADGRL3Q9HAR2 1447 aa14.84□□□□□ -0.03
USP11-209ENST00000488848 NALCNQ8IZF0 1738 aa14.84□□□□□ -0.03
USP11-209ENST00000488848 POGKQ9P215 609 aa14.84□□□□□ -0.03
USP11-209ENST00000488848 STK26Q9P289 416 aa14.84□□□□□ -0.03
USP11-209ENST00000488848 NPC1L1Q9UHC9 1359 aa14.84□□□□□ -0.03
USP11-209ENST00000488848 ATP7BP35670 1465 aa14.83□□□□□ -0.03
USP11-209ENST00000488848 BCANQ96GW7 911 aa14.83□□□□□ -0.04
USP11-209ENST00000488848 FMN2Q9NZ56 1722 aa14.83□□□□□ -0.04
USP11-209ENST00000488848 DCCP43146 1447 aa14.83□□□□□ -0.04
USP11-209ENST00000488848 ANKARQ7Z5J8 1434 aa14.83□□□□□ -0.04
USP11-209ENST00000488848 HSPA2P54652 639 aa14.82□□□□□ -0.04
USP11-209ENST00000488848 ITSN1Q15811 1721 aa14.81□□□□□ -0.04
USP11-209ENST00000488848 WASLO00401 505 aaPredicted RBP14.81□□□□□ -0.04
USP11-209ENST00000488848 DDX10Q13206 875 aaKnown RBP14.81□□□□□ -0.04
USP11-209ENST00000488848 WAPLQ7Z5K2 1190 aa14.81□□□□□ -0.04
USP11-209ENST00000488848 DMRT2Q9Y5R5 561 aa14.81□□□□□ -0.04
USP11-209ENST00000488848 KTN1Q86UP2 1357 aaKnown RBP14.81□□□□□ -0.04
USP11-209ENST00000488848 PER1O15534 1290 aaPredicted RBP14.8□□□□□ -0.04
USP11-209ENST00000488848 ANKRD36BQ8N2N9 1353 aa14.79□□□□□ -0.04
USP11-209ENST00000488848 CD163L1Q9NR16 1453 aa14.79□□□□□ -0.04
USP11-209ENST00000488848 MINK1Q8N4C8 1332 aaPredicted RBP14.77□□□□□ -0.04
USP11-209ENST00000488848 CPSF1Q10570 1443 aaKnown RBP14.76□□□□□ -0.05
USP11-209ENST00000488848 XIRP1Q702N8 1843 aaKnown RBP14.76□□□□□ -0.05
USP11-209ENST00000488848 AKAP12Q02952 1782 aa14.76□□□□□ -0.05
USP11-209ENST00000488848 MON2Q7Z3U7 1717 aa14.76□□□□□ -0.05
USP11-209ENST00000488848 CDK19Q9BWU1 502 aa14.76□□□□□ -0.05
USP11-209ENST00000488848 NRKQ7Z2Y5 1582 aa14.74□□□□□ -0.05
USP11-209ENST00000488848 SENP3Q9H4L4 574 aaPredicted RBP14.74□□□□□ -0.05
USP11-209ENST00000488848 LRRC7Q96NW7 1537 aa14.74□□□□□ -0.05
USP11-209ENST00000488848 SAFB2Q14151 953 aaKnown RBP eCLIP14.73□□□□□ -0.05
USP11-209ENST00000488848 CCDC61Q9Y6R9 512 aa14.73□□□□□ -0.05
USP11-209ENST00000488848 POLR3AO14802 1390 aaPredicted RBP14.73□□□□□ -0.05
USP11-209ENST00000488848 NSD2O96028 1365 aa14.73□□□□□ -0.05
USP11-209ENST00000488848 PARD3Q8TEW0 1356 aa14.73□□□□□ -0.05
USP11-209ENST00000488848 PRR36Q9H6K5 1346 aa14.72□□□□□ -0.05
USP11-209ENST00000488848 PLEKHG3A1L390 1219 aa14.72□□□□□ -0.05
USP11-209ENST00000488848 PANK3Q9H999 370 aa14.72□□□□□ -0.05
USP11-209ENST00000488848 CABP2Q9NPB3 220 aa14.72□□□□□ -0.05
USP11-209ENST00000488848 A0A1W2PP64 1363 aa14.72□□□□□ -0.05
USP11-209ENST00000488848 BRD4O60885 1362 aaPredicted RBP14.72□□□□□ -0.05
USP11-209ENST00000488848 LTBP4Q8N2S1 1624 aa14.71□□□□□ -0.05
USP11-209ENST00000488848 SRPK2P78362 688 aaKnown RBP14.71□□□□□ -0.05
USP11-209ENST00000488848 AMER1Q5JTC6 1135 aaPredicted RBP14.71□□□□□ -0.05
USP11-209ENST00000488848 PPIP5K1Q6PFW1 1433 aa14.71□□□□□ -0.05
USP11-209ENST00000488848 ANKRD26Q9UPS8 1709 aa14.71□□□□□ -0.05
USP11-209ENST00000488848 TMEM94Q12767 1356 aa14.71□□□□□ -0.06
USP11-209ENST00000488848 SSH2Q76I76 1423 aa14.7□□□□□ -0.06
USP11-209ENST00000488848 NUDT16Q96DE0 195 aaKnown RBP14.7□□□□□ -0.06
USP11-209ENST00000488848 PRKRIP1Q9H875 184 aaPredicted RBP14.7□□□□□ -0.06
USP11-209ENST00000488848 KIF1AQ12756 1690 aa14.7□□□□□ -0.06
USP11-209ENST00000488848 USP54Q70EL1 1684 aa14.7□□□□□ -0.06
USP11-209ENST00000488848 EDC4Q6P2E9 1401 aaKnown RBP14.69□□□□□ -0.06
USP11-209ENST00000488848 SLC12A5Q9H2X9 1139 aa14.69□□□□□ -0.06
USP11-209ENST00000488848 C19orf44Q9H6X5 657 aa14.69□□□□□ -0.06
USP11-209ENST00000488848 TERF2IPQ9NYB0 399 aa14.69□□□□□ -0.06
USP11-209ENST00000488848 CCER2I3L3R5 266 aa14.68□□□□□ -0.06
USP11-209ENST00000488848 CARD14Q9BXL6 1004 aa14.68□□□□□ -0.06
USP11-209ENST00000488848 NSD3Q9BZ95 1437 aa14.67□□□□□ -0.06
USP11-209ENST00000488848 ANP32CO43423 234 aa14.67□□□□□ -0.06
USP11-209ENST00000488848 RALBP1Q15311 655 aa14.67□□□□□ -0.06
USP11-209ENST00000488848 RGPD8O14715 1765 aaPredicted RBP14.67□□□□□ -0.06
USP11-209ENST00000488848 MST1RQ04912 1400 aa14.66□□□□□ -0.06
USP11-209ENST00000488848 PROSER2Q86WR7 435 aaPredicted RBP14.66□□□□□ -0.06
USP11-209ENST00000488848 ZNF692Q9BU19 519 aaPredicted RBP14.66□□□□□ -0.06
USP11-209ENST00000488848 KIF20BQ96Q89 1820 aa14.66□□□□□ -0.06
USP11-209ENST00000488848 ZNF335Q9H4Z2 1342 aaPredicted RBP14.66□□□□□ -0.06
USP11-209ENST00000488848 C1orf167Q5SNV9 1468 aa14.65□□□□□ -0.06
USP11-209ENST00000488848 MIER1Q8N108 512 aa14.65□□□□□ -0.06
USP11-209ENST00000488848 POLR3GLQ9BT43 218 aa14.65□□□□□ -0.06
USP11-209ENST00000488848 CABP1Q9NZU7 370 aa14.65□□□□□ -0.06
USP11-209ENST00000488848 KNSTRNQ9Y448 316 aa14.65□□□□□ -0.06
USP11-209ENST00000488848 USP6P35125 1406 aa14.65□□□□□ -0.06
USP11-209ENST00000488848 HDGFL2Q7Z4V5 671 aaPredicted RBP14.64□□□□□ -0.07
USP11-209ENST00000488848 CGNL1Q0VF96 1302 aa14.64□□□□□ -0.07
USP11-209ENST00000488848 IQSEC2Q5JU85 1478 aa14.63□□□□□ -0.07
USP11-209ENST00000488848 MSH6P52701 1360 aa14.63□□□□□ -0.07
USP11-209ENST00000488848 CADPS2Q86UW7 1296 aa14.62□□□□□ -0.07
USP11-209ENST00000488848 TMC1Q8TDI8 760 aa14.62□□□□□ -0.07
USP11-209ENST00000488848 SCAF1Q9H7N4 1312 aaKnown RBP14.61□□□□□ -0.07
USP11-209ENST00000488848 ACEP12821 1306 aa14.6□□□□□ -0.07
USP11-209ENST00000488848 TTC21AQ8NDW8 1320 aa14.6□□□□□ -0.07
USP11-209ENST00000488848 MYBBP1AQ9BQG0 1328 aaKnown RBP14.6□□□□□ -0.07
USP11-209ENST00000488848 USP31Q70CQ4 1352 aa14.6□□□□□ -0.07
USP11-209ENST00000488848 OVOS2A0A0J9YW53 1432 aa14.59□□□□□ -0.07
USP11-209ENST00000488848 OVOS2Q6IE36 1432 aa14.59□□□□□ -0.07
USP11-209ENST00000488848 TRPM3Q9HCF6 1732 aaPredicted RBP14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms