RNA–Protein interactions for RNA: ENST00000488270.1

HDAC10-215, Transcript of histone deacetylase 10, humanhuman

TSL 3

Gene HDAC10, Length 715 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC10-215ENST00000488270 PRAM1Q96QH2 718 aa27.49■■□□□ 1.99
HDAC10-215ENST00000488270 KNDC1Q76NI1 1749 aa27.48■■□□□ 1.99
HDAC10-215ENST00000488270 L3MBTL2Q969R5 705 aa27.48■■□□□ 1.99
HDAC10-215ENST00000488270 TRAK1Q9UPV9 953 aa27.47■■□□□ 1.99
HDAC10-215ENST00000488270 COL16A1Q07092 1604 aaPredicted RBP27.47■■□□□ 1.99
HDAC10-215ENST00000488270 JCADQ9P266 1359 aa27.47■■□□□ 1.99
HDAC10-215ENST00000488270 PHLPP1O60346 1717 aa27.45■■□□□ 1.99
HDAC10-215ENST00000488270 CDC42BPGQ6DT37 1551 aa27.45■■□□□ 1.99
HDAC10-215ENST00000488270 NEUROD1Q13562 356 aa27.44■■□□□ 1.98
HDAC10-215ENST00000488270 DLC1Q96QB1 1528 aa27.44■■□□□ 1.98
HDAC10-215ENST00000488270 SAFB2Q14151 953 aaKnown RBP eCLIP27.43■■□□□ 1.98
HDAC10-215ENST00000488270 NBPF1Q3BBV0 1214 aa27.42■■□□□ 1.98
HDAC10-215ENST00000488270 NUTM2FA1L443 756 aa27.4■■□□□ 1.98
HDAC10-215ENST00000488270 POGKQ9P215 609 aa27.4■■□□□ 1.98
HDAC10-215ENST00000488270 ESCO1Q5FWF5 840 aa27.39■■□□□ 1.98
HDAC10-215ENST00000488270 RGS17Q9UGC6 210 aaPredicted RBP27.39■■□□□ 1.98
HDAC10-215ENST00000488270 SOS2Q07890 1332 aaPredicted RBP27.38■■□□□ 1.97
HDAC10-215ENST00000488270 LRRC59Q96AG4 307 aaKnown RBP27.37■■□□□ 1.97
HDAC10-215ENST00000488270 NHSL1Q5SYE7 1610 aa27.35■■□□□ 1.97
HDAC10-215ENST00000488270 SPATA31A6Q5VVP1 1343 aa27.35■■□□□ 1.97
HDAC10-215ENST00000488270 FOXO3O43524 673 aa27.32■■□□□ 1.96
HDAC10-215ENST00000488270 PHF23Q9BUL5 403 aaPredicted RBP27.32■■□□□ 1.96
HDAC10-215ENST00000488270 HIRIP3Q9BW71 556 aaPredicted RBP27.32■■□□□ 1.96
HDAC10-215ENST00000488270 MINK1Q8N4C8 1332 aaPredicted RBP27.31■■□□□ 1.96
HDAC10-215ENST00000488270 LRP6O75581 1613 aa27.3■■□□□ 1.96
HDAC10-215ENST00000488270 NPHP3Q7Z494 1330 aa27.29■■□□□ 1.96
HDAC10-215ENST00000488270 PNPLA6Q8IY17 1366 aa27.29■■□□□ 1.96
HDAC10-215ENST00000488270 FMN2Q9NZ56 1722 aa27.28■■□□□ 1.96
HDAC10-215ENST00000488270 KIAA1210Q9ULL0 1709 aa27.27■■□□□ 1.96
HDAC10-215ENST00000488270 WASLO00401 505 aaPredicted RBP27.27■■□□□ 1.96
HDAC10-215ENST00000488270 NBPF8Q3BBV2 869 aa27.27■■□□□ 1.96
HDAC10-215ENST00000488270 PXDNQ92626 1479 aa27.25■■□□□ 1.95
HDAC10-215ENST00000488270 PRR36Q9H6K5 1346 aa27.25■■□□□ 1.95
HDAC10-215ENST00000488270 SHPRHQ149N8 1683 aa27.25■■□□□ 1.95
HDAC10-215ENST00000488270 XPCQ01831 940 aaPredicted RBP27.25■■□□□ 1.95
HDAC10-215ENST00000488270 ADGRB2O60241 1585 aa27.25■■□□□ 1.95
HDAC10-215ENST00000488270 PHF8Q9UPP1 1060 aa27.24■■□□□ 1.95
HDAC10-215ENST00000488270 ANKARQ7Z5J8 1434 aa27.23■■□□□ 1.95
HDAC10-215ENST00000488270 NUTM2BA6NNL0 878 aaPredicted RBP27.22■■□□□ 1.95
HDAC10-215ENST00000488270 NUTM2EB1AL46 878 aaPredicted RBP27.22■■□□□ 1.95
HDAC10-215ENST00000488270 POTEAQ6S8J7 498 aa27.22■■□□□ 1.95
HDAC10-215ENST00000488270 NUTM2AQ8IVF1 878 aaPredicted RBP27.22■■□□□ 1.95
HDAC10-215ENST00000488270 PCGF6Q9BYE7 350 aa27.22■■□□□ 1.95
HDAC10-215ENST00000488270 ARHGEF28Q8N1W1 1705 aaKnown RBP27.2■■□□□ 1.94
HDAC10-215ENST00000488270 KRT28Q7Z3Y7 464 aa27.19■■□□□ 1.94
HDAC10-215ENST00000488270 USP32Q8NFA0 1604 aa27.18■■□□□ 1.94
HDAC10-215ENST00000488270 PMFBP1Q8TBY8 1022 aa27.17■■□□□ 1.94
HDAC10-215ENST00000488270 CDK19Q9BWU1 502 aa27.17■■□□□ 1.94
HDAC10-215ENST00000488270 SPATA31A3Q5VYP0 1347 aa27.16■■□□□ 1.94
HDAC10-215ENST00000488270 MEX3CQ5U5Q3 659 aaKnown RBP27.15■■□□□ 1.94
HDAC10-215ENST00000488270 TULP4Q9NRJ4 1543 aa27.15■■□□□ 1.94
HDAC10-215ENST00000488270 CENPJQ9HC77 1338 aaPredicted RBP27.15■■□□□ 1.94
HDAC10-215ENST00000488270 EIF3AQ14152 1382 aaKnown RBP27.14■■□□□ 1.94
HDAC10-215ENST00000488270 TONSLQ96HA7 1378 aa27.14■■□□□ 1.94
HDAC10-215ENST00000488270 SOCS7O14512 581 aa27.14■■□□□ 1.94
HDAC10-215ENST00000488270 NUDT16Q96DE0 195 aaKnown RBP27.14■■□□□ 1.94
HDAC10-215ENST00000488270 ROCK2O75116 1388 aaKnown RBP27.13■■□□□ 1.93
HDAC10-215ENST00000488270 GPRASP1Q5JY77 1395 aa27.13■■□□□ 1.93
HDAC10-215ENST00000488270 TRPM1Q7Z4N2 1603 aa27.12■■□□□ 1.93
HDAC10-215ENST00000488270 KIF1AQ12756 1690 aa27.11■■□□□ 1.93
HDAC10-215ENST00000488270 PSME1Q06323 249 aa27.11■■□□□ 1.93
HDAC10-215ENST00000488270 RGPD8O14715 1765 aaPredicted RBP27.11■■□□□ 1.93
HDAC10-215ENST00000488270 ATP7BP35670 1465 aa27.09■■□□□ 1.93
HDAC10-215ENST00000488270 SBNO1A3KN83 1393 aa27.09■■□□□ 1.93
HDAC10-215ENST00000488270 ADAMTS2O95450 1211 aa27.08■■□□□ 1.93
HDAC10-215ENST00000488270 COL22A1Q8NFW1 1626 aaPredicted RBP27.06■■□□□ 1.92
HDAC10-215ENST00000488270 ZNF772Q68DY9 489 aaPredicted RBP27.06■■□□□ 1.92
HDAC10-215ENST00000488270 CCDC61Q9Y6R9 512 aa27.06■■□□□ 1.92
HDAC10-215ENST00000488270 AFF2P51816 1311 aa27.06■■□□□ 1.92
HDAC10-215ENST00000488270 C8orf37Q96NL8 207 aa27.05■■□□□ 1.92
HDAC10-215ENST00000488270 PLEKHG3A1L390 1219 aa27.04■■□□□ 1.92
HDAC10-215ENST00000488270 TNS3Q68CZ2 1445 aa27.03■■□□□ 1.92
HDAC10-215ENST00000488270 NGDNQ8NEJ9 315 aaKnown RBP27.03■■□□□ 1.92
HDAC10-215ENST00000488270 CABP2Q9NPB3 220 aa27.03■■□□□ 1.92
HDAC10-215ENST00000488270 CARD11Q9BXL7 1154 aa27.02■■□□□ 1.92
HDAC10-215ENST00000488270 RALGAPBQ86X10 1494 aa27.01■■□□□ 1.91
HDAC10-215ENST00000488270 FNBP4Q8N3X1 1017 aaPredicted RBP27.01■■□□□ 1.91
HDAC10-215ENST00000488270 NGLY1Q96IV0 654 aa27.01■■□□□ 1.91
HDAC10-215ENST00000488270 CLSPNQ9HAW4 1339 aa27■■□□□ 1.91
HDAC10-215ENST00000488270 SRPK2P78362 688 aaKnown RBP27■■□□□ 1.91
HDAC10-215ENST00000488270 POLR3AO14802 1390 aaPredicted RBP26.99■■□□□ 1.91
HDAC10-215ENST00000488270 CABLES1Q8TDN4 633 aa26.99■■□□□ 1.91
HDAC10-215ENST00000488270 ACEP12821 1306 aa26.98■■□□□ 1.91
HDAC10-215ENST00000488270 ARHGEF10O15013 1369 aa26.97■■□□□ 1.91
HDAC10-215ENST00000488270 EVC2Q86UK5 1308 aa26.95■■□□□ 1.91
HDAC10-215ENST00000488270 LMOD2Q6P5Q4 547 aa26.95■■□□□ 1.9
HDAC10-215ENST00000488270 QTRT2Q9H974 415 aaKnown RBP26.94■■□□□ 1.9
HDAC10-215ENST00000488270 QRICH2Q9H0J4 1663 aa26.94■■□□□ 1.9
HDAC10-215ENST00000488270 CABP1Q9NZU7 370 aa26.93■■□□□ 1.9
HDAC10-215ENST00000488270 TIMELESSQ9UNS1 1208 aa26.93■■□□□ 1.9
HDAC10-215ENST00000488270 TRPM3Q9HCF6 1732 aaPredicted RBP26.93■■□□□ 1.9
HDAC10-215ENST00000488270 SBNO2Q9Y2G9 1366 aa26.92■■□□□ 1.9
HDAC10-215ENST00000488270 PPIP5K1Q6PFW1 1433 aa26.91■■□□□ 1.9
HDAC10-215ENST00000488270 RXRBP28702 533 aa26.91■■□□□ 1.9
HDAC10-215ENST00000488270 USP21Q9UK80 565 aa26.91■■□□□ 1.9
HDAC10-215ENST00000488270 TOPAZ1Q8N9V7 1692 aa26.91■■□□□ 1.9
HDAC10-215ENST00000488270 PAK3O75914 559 aaPredicted RBP26.9■■□□□ 1.9
HDAC10-215ENST00000488270 PLEKHG5O94827 1062 aa26.9■■□□□ 1.9
HDAC10-215ENST00000488270 BCL9LQ86UU0 1499 aa26.89■■□□□ 1.9
HDAC10-215ENST00000488270 ALS2Q96Q42 1657 aa26.86■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms