RNA–Protein interactions for RNA: ENST00000488035.5

R3HDM1-219, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-219ENST00000488035 SLC16A10Q8TF71 515 aa7.36□□□□□ -1.23
R3HDM1-219ENST00000488035 ATP6V1AP38606 617 aa7.35□□□□□ -1.23
R3HDM1-219ENST00000488035 HIC1Q14526 733 aa7.35□□□□□ -1.23
R3HDM1-219ENST00000488035 BRICD5Q6PL45 260 aa7.35□□□□□ -1.23
R3HDM1-219ENST00000488035 P3H3Q8IVL6 736 aa7.35□□□□□ -1.23
R3HDM1-219ENST00000488035 RDH13Q8NBN7 331 aa7.35□□□□□ -1.23
R3HDM1-219ENST00000488035 NXF1Q9UBU9 619 aaKnown RBP7.35□□□□□ -1.23
R3HDM1-219ENST00000488035 J3QL48 77 aa7.34□□□□□ -1.23
R3HDM1-219ENST00000488035 GMPRP36959 345 aa7.34□□□□□ -1.23
R3HDM1-219ENST00000488035 PLCB2Q00722 1185 aa7.34□□□□□ -1.23
R3HDM1-219ENST00000488035 SUZ12Q15022 739 aaKnown RBP7.34□□□□□ -1.23
R3HDM1-219ENST00000488035 MRGPRX2Q96LB1 330 aa7.34□□□□□ -1.23
R3HDM1-219ENST00000488035 DAXXQ9UER7 740 aaPredicted RBP7.34□□□□□ -1.23
R3HDM1-219ENST00000488035 TRIM32Q13049 653 aa7.33□□□□□ -1.24
R3HDM1-219ENST00000488035 REPIN1Q9BWE0 567 aaKnown RBP7.33□□□□□ -1.24
R3HDM1-219ENST00000488035 SLC27A5Q9Y2P5 690 aa7.33□□□□□ -1.24
R3HDM1-219ENST00000488035 FUT2Q10981 343 aa7.32□□□□□ -1.24
R3HDM1-219ENST00000488035 SULF1Q8IWU6 871 aa7.32□□□□□ -1.24
R3HDM1-219ENST00000488035 HPS1Q92902 700 aa7.32□□□□□ -1.24
R3HDM1-219ENST00000488035 IRF7Q92985 503 aa7.32□□□□□ -1.24
R3HDM1-219ENST00000488035 PRDM9Q9NQV7 894 aa7.32□□□□□ -1.24
R3HDM1-219ENST00000488035 H3BM21 787 aa7.31□□□□□ -1.24
R3HDM1-219ENST00000488035 MMP16P51512 607 aa7.31□□□□□ -1.24
R3HDM1-219ENST00000488035 GRIPAP1Q4V328 841 aa7.31□□□□□ -1.24
R3HDM1-219ENST00000488035 DDX11L8A8MPP1 907 aa7.3□□□□□ -1.24
R3HDM1-219ENST00000488035 TSHZ2Q9NRE2 1034 aa7.3□□□□□ -1.24
R3HDM1-219ENST00000488035 GCGRP47871 477 aa7.29□□□□□ -1.24
R3HDM1-219ENST00000488035 SMYD5Q6GMV2 418 aa7.29□□□□□ -1.24
R3HDM1-219ENST00000488035 SEMA3EO15041 775 aa7.28□□□□□ -1.24
R3HDM1-219ENST00000488035 GNPATO15228 680 aa7.28□□□□□ -1.24
R3HDM1-219ENST00000488035 Q3C1V9 767 aa7.27□□□□□ -1.25
R3HDM1-219ENST00000488035 FECHP22830 423 aa7.26□□□□□ -1.25
R3HDM1-219ENST00000488035 VEGFBP49765 207 aa7.26□□□□□ -1.25
R3HDM1-219ENST00000488035 WNT7BP56706 349 aa7.26□□□□□ -1.25
R3HDM1-219ENST00000488035 ERBB4Q15303 1308 aa7.26□□□□□ -1.25
R3HDM1-219ENST00000488035 DXOO77932 396 aaKnown RBP7.25□□□□□ -1.25
R3HDM1-219ENST00000488035 GSK3AP49840 483 aa7.25□□□□□ -1.25
R3HDM1-219ENST00000488035 KCNMA1Q12791 1236 aa7.25□□□□□ -1.25
R3HDM1-219ENST00000488035 RNF19BQ6ZMZ0 732 aa7.25□□□□□ -1.25
R3HDM1-219ENST00000488035 VSIG8P0DPA2 414 aa7.24□□□□□ -1.25
R3HDM1-219ENST00000488035 HAP1P54257 671 aaPredicted RBP7.24□□□□□ -1.25
R3HDM1-219ENST00000488035 RC3H1Q5TC82 1133 aaKnown RBP7.24□□□□□ -1.25
R3HDM1-219ENST00000488035 TRIM46Q7Z4K8 759 aa7.24□□□□□ -1.25
R3HDM1-219ENST00000488035 SKOR1P84550 965 aa7.23□□□□□ -1.25
R3HDM1-219ENST00000488035 RBM26Q5T8P6 1007 aaKnown RBP7.23□□□□□ -1.25
R3HDM1-219ENST00000488035 SIAH2O43255 324 aa7.21□□□□□ -1.26
R3HDM1-219ENST00000488035 TESPA1A2RU30 521 aaPredicted RBP7.2□□□□□ -1.26
R3HDM1-219ENST00000488035 USB1Q9BQ65 265 aaKnown RBP7.2□□□□□ -1.26
R3HDM1-219ENST00000488035 NLRP7Q8WX94 980 aa7.19□□□□□ -1.26
R3HDM1-219ENST00000488035 GPR37O15354 613 aa7.17□□□□□ -1.26
R3HDM1-219ENST00000488035 CAPN5O15484 640 aaPredicted RBP7.17□□□□□ -1.26
R3HDM1-219ENST00000488035 BMP1P13497 986 aa7.17□□□□□ -1.26
R3HDM1-219ENST00000488035 KDM4AO75164 1064 aa7.16□□□□□ -1.26
R3HDM1-219ENST00000488035 ALDH1A1P00352 501 aa7.16□□□□□ -1.26
R3HDM1-219ENST00000488035 USP46P62068 366 aa7.16□□□□□ -1.26
R3HDM1-219ENST00000488035 CCDC24Q8N4L8 307 aa7.16□□□□□ -1.26
R3HDM1-219ENST00000488035 PHOX2BQ99453 314 aa7.16□□□□□ -1.26
R3HDM1-219ENST00000488035 KCTD17Q8N5Z5 321 aa7.15□□□□□ -1.26
R3HDM1-219ENST00000488035 CD46P15529 392 aa7.14□□□□□ -1.27
R3HDM1-219ENST00000488035 KDM2AQ9Y2K7 1162 aa7.14□□□□□ -1.27
R3HDM1-219ENST00000488035 ZFP42Q96MM3 310 aa7.13□□□□□ -1.27
R3HDM1-219ENST00000488035 GPIHBP1Q8IV16 184 aa7.12□□□□□ -1.27
R3HDM1-219ENST00000488035 MPNDQ8N594 471 aa7.11□□□□□ -1.27
R3HDM1-219ENST00000488035 WASF2Q9Y6W5 498 aa7.11□□□□□ -1.27
R3HDM1-219ENST00000488035 JUNDP17535 347 aa7.1□□□□□ -1.27
R3HDM1-219ENST00000488035 TMEM151AQ8N4L1 468 aa7.1□□□□□ -1.27
R3HDM1-219ENST00000488035 EHBP1Q8NDI1 1231 aa7.1□□□□□ -1.27
R3HDM1-219ENST00000488035 HOXA2O43364 376 aa7.08□□□□□ -1.28
R3HDM1-219ENST00000488035 RASSF7Q02833 373 aa7.08□□□□□ -1.28
R3HDM1-219ENST00000488035 VSIG10Q8N0Z9 540 aa7.08□□□□□ -1.28
R3HDM1-219ENST00000488035 MAP2K5Q13163 448 aa7.07□□□□□ -1.28
R3HDM1-219ENST00000488035 MRPL14Q6P1L8 145 aaKnown RBP7.07□□□□□ -1.28
R3HDM1-219ENST00000488035 NUDT12Q9BQG2 462 aa7.07□□□□□ -1.28
R3HDM1-219ENST00000488035 GDF11O95390 407 aa7.06□□□□□ -1.28
R3HDM1-219ENST00000488035 PTCRAQ6ISU1 281 aaPredicted RBP7.06□□□□□ -1.28
R3HDM1-219ENST00000488035 RETREG3Q86VR2 466 aa7.06□□□□□ -1.28
R3HDM1-219ENST00000488035 SOBPA7XYQ1 873 aa7.05□□□□□ -1.28
R3HDM1-219ENST00000488035 RNF225M0QZC1 329 aaPredicted RBP7.05□□□□□ -1.28
R3HDM1-219ENST00000488035 SH3BP2P78314 561 aa7.05□□□□□ -1.28
R3HDM1-219ENST00000488035 HLA-CQ95604 372 aa7.05□□□□□ -1.28
R3HDM1-219ENST00000488035 KLF16Q9BXK1 252 aaPredicted RBP7.05□□□□□ -1.28
R3HDM1-219ENST00000488035 PLEKHG3A1L390 1219 aa7.04□□□□□ -1.28
R3HDM1-219ENST00000488035 MDM2Q00987 491 aaPredicted RBP7.04□□□□□ -1.28
R3HDM1-219ENST00000488035 SCARF1Q14162 830 aa7.04□□□□□ -1.28
R3HDM1-219ENST00000488035 IRF6O14896 467 aa7.03□□□□□ -1.28
R3HDM1-219ENST00000488035 IGHA1P01876 353 aa7.03□□□□□ -1.28
R3HDM1-219ENST00000488035 NUTM1Q86Y26 1132 aa7.03□□□□□ -1.28
R3HDM1-219ENST00000488035 CCNYL3P0C7X3 344 aa7.02□□□□□ -1.29
R3HDM1-219ENST00000488035 MS4A1P11836 297 aa7.02□□□□□ -1.29
R3HDM1-219ENST00000488035 TIMP2P16035 220 aa7.02□□□□□ -1.29
R3HDM1-219ENST00000488035 MINK1Q8N4C8 1332 aaPredicted RBP7.01□□□□□ -1.29
R3HDM1-219ENST00000488035 TULP1O00294 542 aaPredicted RBP7.01□□□□□ -1.29
R3HDM1-219ENST00000488035 PPFIA3O75145 1194 aa7.01□□□□□ -1.29
R3HDM1-219ENST00000488035 CLCN1P35523 988 aa7.01□□□□□ -1.29
R3HDM1-219ENST00000488035 GUCA2AQ02747 115 aa7.01□□□□□ -1.29
R3HDM1-219ENST00000488035 SYMPKQ92797 1274 aaKnown RBP7.01□□□□□ -1.29
R3HDM1-219ENST00000488035 ADAMTS8Q9UP79 889 aa7.01□□□□□ -1.29
R3HDM1-219ENST00000488035 DNMT3AQ9Y6K1 912 aaPredicted RBP7.01□□□□□ -1.29
R3HDM1-219ENST00000488035 ADH1CP00326 375 aa7□□□□□ -1.29
R3HDM1-219ENST00000488035 VARSP26640 1264 aaKnown RBP7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms