RNA–Protein interactions for RNA: ENST00000487989.1

PFKFB3-213, Transcript of 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3, humanhuman

TSL 2

Gene PFKFB3, Length 661 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFKFB3-213ENST00000487989 C1orf167Q5SNV9 1468 aa20.43■□□□□ 0.86
PFKFB3-213ENST00000487989 SAFB2Q14151 953 aaKnown RBP eCLIP20.43■□□□□ 0.86
PFKFB3-213ENST00000487989 PHLPP1O60346 1717 aa20.43■□□□□ 0.86
PFKFB3-213ENST00000487989 PCGF6Q9BYE7 350 aa20.42■□□□□ 0.86
PFKFB3-213ENST00000487989 ORAI2Q96SN7 254 aa20.41■□□□□ 0.86
PFKFB3-213ENST00000487989 DLC1Q96QB1 1528 aa20.41■□□□□ 0.86
PFKFB3-213ENST00000487989 CDC42BPGQ6DT37 1551 aa20.41■□□□□ 0.86
PFKFB3-213ENST00000487989 AHDC1Q5TGY3 1603 aaPredicted RBP20.4■□□□□ 0.86
PFKFB3-213ENST00000487989 NUTM2FA1L443 756 aa20.39■□□□□ 0.85
PFKFB3-213ENST00000487989 NBPF1Q3BBV0 1214 aa20.38■□□□□ 0.85
PFKFB3-213ENST00000487989 DDX17Q92841 729 aaKnown RBP20.38■□□□□ 0.85
PFKFB3-213ENST00000487989 COL16A1Q07092 1604 aaPredicted RBP20.38■□□□□ 0.85
PFKFB3-213ENST00000487989 MED1Q15648 1581 aaPredicted RBP20.38■□□□□ 0.85
PFKFB3-213ENST00000487989 JCADQ9P266 1359 aa20.37■□□□□ 0.85
PFKFB3-213ENST00000487989 ESCO1Q5FWF5 840 aa20.37■□□□□ 0.85
PFKFB3-213ENST00000487989 KIAA1210Q9ULL0 1709 aa20.36■□□□□ 0.85
PFKFB3-213ENST00000487989 MINK1Q8N4C8 1332 aaPredicted RBP20.33■□□□□ 0.85
PFKFB3-213ENST00000487989 LRRC59Q96AG4 307 aaKnown RBP20.33■□□□□ 0.85
PFKFB3-213ENST00000487989 HIRIP3Q9BW71 556 aaPredicted RBP20.33■□□□□ 0.85
PFKFB3-213ENST00000487989 NHSL1Q5SYE7 1610 aa20.33■□□□□ 0.84
PFKFB3-213ENST00000487989 TONSLQ96HA7 1378 aa20.32■□□□□ 0.84
PFKFB3-213ENST00000487989 FMN2Q9NZ56 1722 aa20.31■□□□□ 0.84
PFKFB3-213ENST00000487989 PHF23Q9BUL5 403 aaPredicted RBP20.31■□□□□ 0.84
PFKFB3-213ENST00000487989 FOXO3O43524 673 aa20.29■□□□□ 0.84
PFKFB3-213ENST00000487989 SOS2Q07890 1332 aaPredicted RBP20.28■□□□□ 0.84
PFKFB3-213ENST00000487989 SPATA31A6Q5VVP1 1343 aa20.28■□□□□ 0.84
PFKFB3-213ENST00000487989 NPHP3Q7Z494 1330 aa20.28■□□□□ 0.84
PFKFB3-213ENST00000487989 ARHGEF28Q8N1W1 1705 aaKnown RBP20.28■□□□□ 0.84
PFKFB3-213ENST00000487989 ADGRB2O60241 1585 aa20.27■□□□□ 0.84
PFKFB3-213ENST00000487989 WASLO00401 505 aaPredicted RBP20.27■□□□□ 0.84
PFKFB3-213ENST00000487989 NBPF8Q3BBV2 869 aa20.27■□□□□ 0.84
PFKFB3-213ENST00000487989 ROCK2O75116 1388 aaKnown RBP20.25■□□□□ 0.83
PFKFB3-213ENST00000487989 XPCQ01831 940 aaPredicted RBP20.25■□□□□ 0.83
PFKFB3-213ENST00000487989 PHF8Q9UPP1 1060 aa20.25■□□□□ 0.83
PFKFB3-213ENST00000487989 SHPRHQ149N8 1683 aa20.25■□□□□ 0.83
PFKFB3-213ENST00000487989 TRPM1Q7Z4N2 1603 aa20.24■□□□□ 0.83
PFKFB3-213ENST00000487989 NUTM2BA6NNL0 878 aaPredicted RBP20.24■□□□□ 0.83
PFKFB3-213ENST00000487989 NUTM2EB1AL46 878 aaPredicted RBP20.24■□□□□ 0.83
PFKFB3-213ENST00000487989 ILDR2Q71H61 639 aa20.24■□□□□ 0.83
PFKFB3-213ENST00000487989 NUTM2AQ8IVF1 878 aaPredicted RBP20.24■□□□□ 0.83
PFKFB3-213ENST00000487989 ANKARQ7Z5J8 1434 aa20.24■□□□□ 0.83
PFKFB3-213ENST00000487989 EIF3AQ14152 1382 aaKnown RBP20.23■□□□□ 0.83
PFKFB3-213ENST00000487989 CENPJQ9HC77 1338 aaPredicted RBP20.23■□□□□ 0.83
PFKFB3-213ENST00000487989 PNPLA6Q8IY17 1366 aa20.22■□□□□ 0.83
PFKFB3-213ENST00000487989 MEX3CQ5U5Q3 659 aaKnown RBP20.22■□□□□ 0.83
PFKFB3-213ENST00000487989 KRT28Q7Z3Y7 464 aa20.21■□□□□ 0.83
PFKFB3-213ENST00000487989 PMFBP1Q8TBY8 1022 aa20.21■□□□□ 0.83
PFKFB3-213ENST00000487989 CDK19Q9BWU1 502 aa20.21■□□□□ 0.83
PFKFB3-213ENST00000487989 PXDNQ92626 1479 aa20.21■□□□□ 0.83
PFKFB3-213ENST00000487989 KIF1AQ12756 1690 aa20.21■□□□□ 0.83
PFKFB3-213ENST00000487989 PRR36Q9H6K5 1346 aa20.21■□□□□ 0.83
PFKFB3-213ENST00000487989 RGPD8O14715 1765 aaPredicted RBP20.21■□□□□ 0.83
PFKFB3-213ENST00000487989 LRP6O75581 1613 aa20.2■□□□□ 0.82
PFKFB3-213ENST00000487989 TULP4Q9NRJ4 1543 aa20.2■□□□□ 0.82
PFKFB3-213ENST00000487989 USP32Q8NFA0 1604 aa20.2■□□□□ 0.82
PFKFB3-213ENST00000487989 RGS17Q9UGC6 210 aaPredicted RBP20.19■□□□□ 0.82
PFKFB3-213ENST00000487989 PSME1Q06323 249 aa20.18■□□□□ 0.82
PFKFB3-213ENST00000487989 NUDT16Q96DE0 195 aaKnown RBP20.18■□□□□ 0.82
PFKFB3-213ENST00000487989 CLSPNQ9HAW4 1339 aa20.18■□□□□ 0.82
PFKFB3-213ENST00000487989 CARD11Q9BXL7 1154 aa20.17■□□□□ 0.82
PFKFB3-213ENST00000487989 GPRASP1Q5JY77 1395 aa20.17■□□□□ 0.82
PFKFB3-213ENST00000487989 CCER1Q8TC90 406 aaPredicted RBP20.15■□□□□ 0.82
PFKFB3-213ENST00000487989 SPATA31A3Q5VYP0 1347 aa20.15■□□□□ 0.82
PFKFB3-213ENST00000487989 SRPK2P78362 688 aaKnown RBP20.14■□□□□ 0.81
PFKFB3-213ENST00000487989 NGDNQ8NEJ9 315 aaKnown RBP20.14■□□□□ 0.81
PFKFB3-213ENST00000487989 ATP7BP35670 1465 aa20.13■□□□□ 0.81
PFKFB3-213ENST00000487989 RALGAPBQ86X10 1494 aa20.13■□□□□ 0.81
PFKFB3-213ENST00000487989 QRICH2Q9H0J4 1663 aa20.13■□□□□ 0.81
PFKFB3-213ENST00000487989 ADAMTS2O95450 1211 aa20.12■□□□□ 0.81
PFKFB3-213ENST00000487989 CCDC61Q9Y6R9 512 aa20.12■□□□□ 0.81
PFKFB3-213ENST00000487989 CABP2Q9NPB3 220 aa20.11■□□□□ 0.81
PFKFB3-213ENST00000487989 TIMELESSQ9UNS1 1208 aa20.11■□□□□ 0.81
PFKFB3-213ENST00000487989 SBNO1A3KN83 1393 aa20.1■□□□□ 0.81
PFKFB3-213ENST00000487989 EVC2Q86UK5 1308 aa20.1■□□□□ 0.81
PFKFB3-213ENST00000487989 LMOD2Q6P5Q4 547 aa20.1■□□□□ 0.81
PFKFB3-213ENST00000487989 POTEAQ6S8J7 498 aa20.1■□□□□ 0.81
PFKFB3-213ENST00000487989 C8orf37Q96NL8 207 aa20.1■□□□□ 0.81
PFKFB3-213ENST00000487989 COL22A1Q8NFW1 1626 aaPredicted RBP20.09■□□□□ 0.81
PFKFB3-213ENST00000487989 TNS3Q68CZ2 1445 aa20.09■□□□□ 0.81
PFKFB3-213ENST00000487989 ZNF772Q68DY9 489 aaPredicted RBP20.08■□□□□ 0.81
PFKFB3-213ENST00000487989 ITSN1Q15811 1721 aa20.07■□□□□ 0.8
PFKFB3-213ENST00000487989 PLEKHG3A1L390 1219 aa20.07■□□□□ 0.8
PFKFB3-213ENST00000487989 NGLY1Q96IV0 654 aa20.07■□□□□ 0.8
PFKFB3-213ENST00000487989 ACEP12821 1306 aa20.06■□□□□ 0.8
PFKFB3-213ENST00000487989 AFF2P51816 1311 aa20.06■□□□□ 0.8
PFKFB3-213ENST00000487989 PAK3O75914 559 aaPredicted RBP20.06■□□□□ 0.8
PFKFB3-213ENST00000487989 PLEKHG5O94827 1062 aa20.06■□□□□ 0.8
PFKFB3-213ENST00000487989 ARHGEF10O15013 1369 aa20.06■□□□□ 0.8
PFKFB3-213ENST00000487989 PPIP5K1Q6PFW1 1433 aa20.04■□□□□ 0.8
PFKFB3-213ENST00000487989 CABLES1Q8TDN4 633 aa20.04■□□□□ 0.8
PFKFB3-213ENST00000487989 POLR3AO14802 1390 aaPredicted RBP20.04■□□□□ 0.8
PFKFB3-213ENST00000487989 TOPAZ1Q8N9V7 1692 aa20.03■□□□□ 0.8
PFKFB3-213ENST00000487989 HAP1P54257 671 aaPredicted RBP20.03■□□□□ 0.8
PFKFB3-213ENST00000487989 CABP1Q9NZU7 370 aa20.03■□□□□ 0.8
PFKFB3-213ENST00000487989 SOCS7O14512 581 aa20.02■□□□□ 0.8
PFKFB3-213ENST00000487989 SBNO2Q9Y2G9 1366 aa20.02■□□□□ 0.8
PFKFB3-213ENST00000487989 TRPM3Q9HCF6 1732 aaPredicted RBP20.02■□□□□ 0.79
PFKFB3-213ENST00000487989 ST20-MTHFSA0A0A6YYL1 179 aa19.99■□□□□ 0.79
PFKFB3-213ENST00000487989 FNBP4Q8N3X1 1017 aaPredicted RBP19.98■□□□□ 0.79
PFKFB3-213ENST00000487989 QTRT2Q9H974 415 aaKnown RBP19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms