RNA–Protein interactions for RNA: ENST00000487427.5

ITSN1-229, Transcript of intersectin 1, humanhuman

TSL 1 (best)

Gene ITSN1, Length 805 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-229ENST00000487427 DHX57Q6P158 1386 aaKnown RBP18.19■□□□□ 0.5
ITSN1-229ENST00000487427 ASXL1Q8IXJ9 1541 aa18.19■□□□□ 0.5
ITSN1-229ENST00000487427 DCAF11Q8TEB1 546 aa18.19■□□□□ 0.5
ITSN1-229ENST00000487427 KDM2AQ9Y2K7 1162 aa18.19■□□□□ 0.5
ITSN1-229ENST00000487427 COL16A1Q07092 1604 aaPredicted RBP18.19■□□□□ 0.5
ITSN1-229ENST00000487427 IFT172Q9UG01 1749 aa18.18■□□□□ 0.5
ITSN1-229ENST00000487427 YTHDC2Q9H6S0 1430 aaKnown RBP18.18■□□□□ 0.5
ITSN1-229ENST00000487427 ORAI2Q96SN7 254 aa18.18■□□□□ 0.5
ITSN1-229ENST00000487427 DDX17Q92841 729 aaKnown RBP18.17■□□□□ 0.5
ITSN1-229ENST00000487427 NALCNQ8IZF0 1738 aa18.17■□□□□ 0.5
ITSN1-229ENST00000487427 CNKSR2Q8WXI2 1034 aa18.16■□□□□ 0.5
ITSN1-229ENST00000487427 PLEKHH1Q9ULM0 1364 aa18.15■□□□□ 0.5
ITSN1-229ENST00000487427 ESCO1Q5FWF5 840 aa18.14■□□□□ 0.49
ITSN1-229ENST00000487427 MEX3CQ5U5Q3 659 aaKnown RBP18.13■□□□□ 0.49
ITSN1-229ENST00000487427 POTEAQ6S8J7 498 aa18.12■□□□□ 0.49
ITSN1-229ENST00000487427 SOS2Q07890 1332 aaPredicted RBP18.12■□□□□ 0.49
ITSN1-229ENST00000487427 NUTM2BA6NNL0 878 aaPredicted RBP18.11■□□□□ 0.49
ITSN1-229ENST00000487427 NUTM2EB1AL46 878 aaPredicted RBP18.11■□□□□ 0.49
ITSN1-229ENST00000487427 NPM3O75607 178 aaKnown RBP18.11■□□□□ 0.49
ITSN1-229ENST00000487427 NUTM2AQ8IVF1 878 aaPredicted RBP18.11■□□□□ 0.49
ITSN1-229ENST00000487427 PRAM1Q96QH2 718 aa18.11■□□□□ 0.49
ITSN1-229ENST00000487427 POGKQ9P215 609 aa18.11■□□□□ 0.49
ITSN1-229ENST00000487427 CDC42BPGQ6DT37 1551 aa18.09■□□□□ 0.49
ITSN1-229ENST00000487427 NPHP3Q7Z494 1330 aa18.09■□□□□ 0.49
ITSN1-229ENST00000487427 NUTM2FA1L443 756 aa18.09■□□□□ 0.49
ITSN1-229ENST00000487427 FOXO3O43524 673 aa18.08■□□□□ 0.48
ITSN1-229ENST00000487427 SAFB2Q14151 953 aaKnown RBP eCLIP18.08■□□□□ 0.48
ITSN1-229ENST00000487427 TRAK1Q9UPV9 953 aa18.08■□□□□ 0.48
ITSN1-229ENST00000487427 LRP6O75581 1613 aa18.08■□□□□ 0.48
ITSN1-229ENST00000487427 LAMC1P11047 1609 aa18.08■□□□□ 0.48
ITSN1-229ENST00000487427 NHSL1Q5SYE7 1610 aa18.08■□□□□ 0.48
ITSN1-229ENST00000487427 PNPLA6Q8IY17 1366 aa18.07■□□□□ 0.48
ITSN1-229ENST00000487427 ZNF772Q68DY9 489 aaPredicted RBP18.07■□□□□ 0.48
ITSN1-229ENST00000487427 SHPRHQ149N8 1683 aa18.06■□□□□ 0.48
ITSN1-229ENST00000487427 KNDC1Q76NI1 1749 aa18.06■□□□□ 0.48
ITSN1-229ENST00000487427 ADGRB1O14514 1584 aa18.04■□□□□ 0.48
ITSN1-229ENST00000487427 DLC1Q96QB1 1528 aa18.04■□□□□ 0.48
ITSN1-229ENST00000487427 XPCQ01831 940 aaPredicted RBP18.02■□□□□ 0.48
ITSN1-229ENST00000487427 PHF8Q9UPP1 1060 aa18.01■□□□□ 0.47
ITSN1-229ENST00000487427 C8orf37Q96NL8 207 aa18■□□□□ 0.47
ITSN1-229ENST00000487427 AFF2P51816 1311 aa17.99■□□□□ 0.47
ITSN1-229ENST00000487427 MINK1Q8N4C8 1332 aaPredicted RBP17.99■□□□□ 0.47
ITSN1-229ENST00000487427 ADAMTS2O95450 1211 aa17.99■□□□□ 0.47
ITSN1-229ENST00000487427 KRT28Q7Z3Y7 464 aa17.99■□□□□ 0.47
ITSN1-229ENST00000487427 HIRIP3Q9BW71 556 aaPredicted RBP17.99■□□□□ 0.47
ITSN1-229ENST00000487427 PXDNQ92626 1479 aa17.99■□□□□ 0.47
ITSN1-229ENST00000487427 PSME1Q06323 249 aa17.98■□□□□ 0.47
ITSN1-229ENST00000487427 NGLY1Q96IV0 654 aa17.98■□□□□ 0.47
ITSN1-229ENST00000487427 SIN3AQ96ST3 1273 aa17.98■□□□□ 0.47
ITSN1-229ENST00000487427 WASLO00401 505 aaPredicted RBP17.97■□□□□ 0.47
ITSN1-229ENST00000487427 L3MBTL2Q969R5 705 aa17.97■□□□□ 0.47
ITSN1-229ENST00000487427 FMN2Q9NZ56 1722 aa17.96■□□□□ 0.47
ITSN1-229ENST00000487427 RXRBP28702 533 aa17.96■□□□□ 0.47
ITSN1-229ENST00000487427 NBPF1Q3BBV0 1214 aa17.96■□□□□ 0.47
ITSN1-229ENST00000487427 ANKARQ7Z5J8 1434 aa17.96■□□□□ 0.47
ITSN1-229ENST00000487427 SPATA31A3Q5VYP0 1347 aa17.96■□□□□ 0.46
ITSN1-229ENST00000487427 TRIM26Q12899 539 aaPredicted RBP17.95■□□□□ 0.46
ITSN1-229ENST00000487427 NEUROD1Q13562 356 aa17.95■□□□□ 0.46
ITSN1-229ENST00000487427 QTRT2Q9H974 415 aaKnown RBP17.95■□□□□ 0.46
ITSN1-229ENST00000487427 EIF3AQ14152 1382 aaKnown RBP17.94■□□□□ 0.46
ITSN1-229ENST00000487427 PMFBP1Q8TBY8 1022 aa17.94■□□□□ 0.46
ITSN1-229ENST00000487427 FNBP4Q8N3X1 1017 aaPredicted RBP17.92■□□□□ 0.46
ITSN1-229ENST00000487427 PRR36Q9H6K5 1346 aa17.92■□□□□ 0.46
ITSN1-229ENST00000487427 ADGRB2O60241 1585 aa17.91■□□□□ 0.46
ITSN1-229ENST00000487427 SBNO1A3KN83 1393 aa17.91■□□□□ 0.46
ITSN1-229ENST00000487427 KIF1AQ12756 1690 aa17.9■□□□□ 0.46
ITSN1-229ENST00000487427 RBM6P78332 1123 aaKnown RBP17.9■□□□□ 0.46
ITSN1-229ENST00000487427 USP21Q9UK80 565 aa17.9■□□□□ 0.46
ITSN1-229ENST00000487427 NUDT16Q96DE0 195 aaKnown RBP17.89■□□□□ 0.45
ITSN1-229ENST00000487427 CDK19Q9BWU1 502 aa17.89■□□□□ 0.45
ITSN1-229ENST00000487427 COL22A1Q8NFW1 1626 aaPredicted RBP17.89■□□□□ 0.45
ITSN1-229ENST00000487427 LMOD2Q6P5Q4 547 aa17.88■□□□□ 0.45
ITSN1-229ENST00000487427 NGDNQ8NEJ9 315 aaKnown RBP17.88■□□□□ 0.45
ITSN1-229ENST00000487427 GPRASP1Q5JY77 1395 aa17.88■□□□□ 0.45
ITSN1-229ENST00000487427 TRPC5Q9UL62 973 aaPredicted RBP17.87■□□□□ 0.45
ITSN1-229ENST00000487427 TNS3Q68CZ2 1445 aa17.87■□□□□ 0.45
ITSN1-229ENST00000487427 TULP4Q9NRJ4 1543 aa17.87■□□□□ 0.45
ITSN1-229ENST00000487427 KIAA1210Q9ULL0 1709 aa17.86■□□□□ 0.45
ITSN1-229ENST00000487427 ARHGEF10O15013 1369 aa17.86■□□□□ 0.45
ITSN1-229ENST00000487427 HAP1P54257 671 aaPredicted RBP17.85■□□□□ 0.45
ITSN1-229ENST00000487427 CENPJQ9HC77 1338 aaPredicted RBP17.85■□□□□ 0.45
ITSN1-229ENST00000487427 CDK12Q9NYV4 1490 aaPredicted RBP17.85■□□□□ 0.45
ITSN1-229ENST00000487427 CCDC61Q9Y6R9 512 aa17.85■□□□□ 0.45
ITSN1-229ENST00000487427 USP32Q8NFA0 1604 aa17.84■□□□□ 0.45
ITSN1-229ENST00000487427 CABLES1Q8TDN4 633 aa17.84■□□□□ 0.45
ITSN1-229ENST00000487427 RGPD8O14715 1765 aaPredicted RBP17.84■□□□□ 0.45
ITSN1-229ENST00000487427 ARHGEF28Q8N1W1 1705 aaKnown RBP17.83■□□□□ 0.44
ITSN1-229ENST00000487427 PLEKHG3A1L390 1219 aa17.82■□□□□ 0.44
ITSN1-229ENST00000487427 PLEKHG5O94827 1062 aa17.81■□□□□ 0.44
ITSN1-229ENST00000487427 BCL9LQ86UU0 1499 aa17.81■□□□□ 0.44
ITSN1-229ENST00000487427 PAK3O75914 559 aaPredicted RBP17.8■□□□□ 0.44
ITSN1-229ENST00000487427 SRPK2P78362 688 aaKnown RBP17.8■□□□□ 0.44
ITSN1-229ENST00000487427 UNC5CLQ8IV45 518 aa17.8■□□□□ 0.44
ITSN1-229ENST00000487427 ATP7BP35670 1465 aa17.8■□□□□ 0.44
ITSN1-229ENST00000487427 ATRNO75882 1429 aa17.8■□□□□ 0.44
ITSN1-229ENST00000487427 ROCK2O75116 1388 aaKnown RBP17.79■□□□□ 0.44
ITSN1-229ENST00000487427 NBPF8Q3BBV2 869 aa17.79■□□□□ 0.44
ITSN1-229ENST00000487427 ACEP12821 1306 aa17.78■□□□□ 0.44
ITSN1-229ENST00000487427 GJD4Q96KN9 370 aaPredicted RBP17.78■□□□□ 0.44
ITSN1-229ENST00000487427 FAM83GA6ND36 823 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms