RNA–Protein interactions for RNA: ENST00000487266.1

GABPA-203, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

TSL 2

Gene GABPA, Length 780 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-203ENST00000487266 JCADQ9P266 1359 aa23.21■■□□□ 1.31
GABPA-203ENST00000487266 ADGRB1O14514 1584 aa23.2■■□□□ 1.3
GABPA-203ENST00000487266 SHPRHQ149N8 1683 aa23.19■■□□□ 1.3
GABPA-203ENST00000487266 LRP6O75581 1613 aa23.17■■□□□ 1.3
GABPA-203ENST00000487266 ORAI2Q96SN7 254 aa23.16■■□□□ 1.3
GABPA-203ENST00000487266 FMN2Q9NZ56 1722 aa23.16■■□□□ 1.3
GABPA-203ENST00000487266 RGS17Q9UGC6 210 aaPredicted RBP23.14■■□□□ 1.29
GABPA-203ENST00000487266 NUTM2FA1L443 756 aa23.13■■□□□ 1.29
GABPA-203ENST00000487266 SAFB2Q14151 953 aaKnown RBP eCLIP23.12■■□□□ 1.29
GABPA-203ENST00000487266 DLC1Q96QB1 1528 aa23.12■■□□□ 1.29
GABPA-203ENST00000487266 RGPD8O14715 1765 aaPredicted RBP23.1■■□□□ 1.29
GABPA-203ENST00000487266 PRAM1Q96QH2 718 aa23.1■■□□□ 1.29
GABPA-203ENST00000487266 ARHGEF28Q8N1W1 1705 aaKnown RBP23.08■■□□□ 1.29
GABPA-203ENST00000487266 TRAK1Q9UPV9 953 aa23.08■■□□□ 1.29
GABPA-203ENST00000487266 SPATA31A6Q5VVP1 1343 aa23.07■■□□□ 1.28
GABPA-203ENST00000487266 ESCO1Q5FWF5 840 aa23.06■■□□□ 1.28
GABPA-203ENST00000487266 PNPLA6Q8IY17 1366 aa23.05■■□□□ 1.28
GABPA-203ENST00000487266 SIRT1Q96EB6 747 aa23.05■■□□□ 1.28
GABPA-203ENST00000487266 SIN3AQ96ST3 1273 aa23.05■■□□□ 1.28
GABPA-203ENST00000487266 ADGRB2O60241 1585 aa23.05■■□□□ 1.28
GABPA-203ENST00000487266 NUTM2BA6NNL0 878 aaPredicted RBP23.04■■□□□ 1.28
GABPA-203ENST00000487266 NUTM2EB1AL46 878 aaPredicted RBP23.04■■□□□ 1.28
GABPA-203ENST00000487266 SOCS7O14512 581 aa23.04■■□□□ 1.28
GABPA-203ENST00000487266 NUTM2AQ8IVF1 878 aaPredicted RBP23.04■■□□□ 1.28
GABPA-203ENST00000487266 KIAA1210Q9ULL0 1709 aa23.04■■□□□ 1.28
GABPA-203ENST00000487266 USP32Q8NFA0 1604 aa23.04■■□□□ 1.28
GABPA-203ENST00000487266 PXDNQ92626 1479 aa23.03■■□□□ 1.28
GABPA-203ENST00000487266 SOS2Q07890 1332 aaPredicted RBP23.03■■□□□ 1.28
GABPA-203ENST00000487266 XPCQ01831 940 aaPredicted RBP23.02■■□□□ 1.28
GABPA-203ENST00000487266 LRRC59Q96AG4 307 aaKnown RBP23.02■■□□□ 1.28
GABPA-203ENST00000487266 STAC3Q96MF2 364 aa23.02■■□□□ 1.28
GABPA-203ENST00000487266 POGKQ9P215 609 aa23.02■■□□□ 1.28
GABPA-203ENST00000487266 KIF1AQ12756 1690 aa23.02■■□□□ 1.28
GABPA-203ENST00000487266 POTEAQ6S8J7 498 aa23.01■■□□□ 1.27
GABPA-203ENST00000487266 HIRIP3Q9BW71 556 aaPredicted RBP23.01■■□□□ 1.27
GABPA-203ENST00000487266 MEX3CQ5U5Q3 659 aaKnown RBP23■■□□□ 1.27
GABPA-203ENST00000487266 TRIM26Q12899 539 aaPredicted RBP22.99■■□□□ 1.27
GABPA-203ENST00000487266 FOXO3O43524 673 aa22.98■■□□□ 1.27
GABPA-203ENST00000487266 NEUROD1Q13562 356 aa22.98■■□□□ 1.27
GABPA-203ENST00000487266 MINK1Q8N4C8 1332 aaPredicted RBP22.98■■□□□ 1.27
GABPA-203ENST00000487266 L3MBTL2Q969R5 705 aa22.97■■□□□ 1.27
GABPA-203ENST00000487266 NPHP3Q7Z494 1330 aa22.97■■□□□ 1.27
GABPA-203ENST00000487266 COL22A1Q8NFW1 1626 aaPredicted RBP22.97■■□□□ 1.27
GABPA-203ENST00000487266 NBPF1Q3BBV0 1214 aa22.96■■□□□ 1.27
GABPA-203ENST00000487266 TRPM1Q7Z4N2 1603 aa22.92■■□□□ 1.26
GABPA-203ENST00000487266 TULP4Q9NRJ4 1543 aa22.92■■□□□ 1.26
GABPA-203ENST00000487266 ANKARQ7Z5J8 1434 aa22.91■■□□□ 1.26
GABPA-203ENST00000487266 PRR36Q9H6K5 1346 aa22.91■■□□□ 1.26
GABPA-203ENST00000487266 PHF8Q9UPP1 1060 aa22.91■■□□□ 1.26
GABPA-203ENST00000487266 ADAMTS2O95450 1211 aa22.89■■□□□ 1.25
GABPA-203ENST00000487266 C8orf37Q96NL8 207 aa22.89■■□□□ 1.25
GABPA-203ENST00000487266 AFF2P51816 1311 aa22.88■■□□□ 1.25
GABPA-203ENST00000487266 PMFBP1Q8TBY8 1022 aa22.88■■□□□ 1.25
GABPA-203ENST00000487266 WASLO00401 505 aaPredicted RBP22.87■■□□□ 1.25
GABPA-203ENST00000487266 QRICH2Q9H0J4 1663 aa22.87■■□□□ 1.25
GABPA-203ENST00000487266 ATP7BP35670 1465 aa22.86■■□□□ 1.25
GABPA-203ENST00000487266 ITSN1Q15811 1721 aa22.85■■□□□ 1.25
GABPA-203ENST00000487266 MARF1Q9Y4F3 1742 aaKnown RBP22.85■■□□□ 1.25
GABPA-203ENST00000487266 KRT28Q7Z3Y7 464 aa22.85■■□□□ 1.25
GABPA-203ENST00000487266 TRPM3Q9HCF6 1732 aaPredicted RBP22.85■■□□□ 1.25
GABPA-203ENST00000487266 SPATA31A3Q5VYP0 1347 aa22.84■■□□□ 1.25
GABPA-203ENST00000487266 TNS3Q68CZ2 1445 aa22.84■■□□□ 1.25
GABPA-203ENST00000487266 ZNF772Q68DY9 489 aaPredicted RBP22.84■■□□□ 1.25
GABPA-203ENST00000487266 TOPAZ1Q8N9V7 1692 aa22.84■■□□□ 1.25
GABPA-203ENST00000487266 ABCA3Q99758 1704 aa22.83■■□□□ 1.25
GABPA-203ENST00000487266 EIF3AQ14152 1382 aaKnown RBP22.83■■□□□ 1.25
GABPA-203ENST00000487266 PLEKHG5O94827 1062 aa22.8■■□□□ 1.24
GABPA-203ENST00000487266 NBPF8Q3BBV2 869 aa22.8■■□□□ 1.24
GABPA-203ENST00000487266 CDK19Q9BWU1 502 aa22.79■■□□□ 1.24
GABPA-203ENST00000487266 CENPJQ9HC77 1338 aaPredicted RBP22.79■■□□□ 1.24
GABPA-203ENST00000487266 ROCK2O75116 1388 aaKnown RBP22.78■■□□□ 1.24
GABPA-203ENST00000487266 ALS2Q96Q42 1657 aa22.78■■□□□ 1.24
GABPA-203ENST00000487266 PSME1Q06323 249 aa22.78■■□□□ 1.24
GABPA-203ENST00000487266 NGLY1Q96IV0 654 aa22.78■■□□□ 1.24
GABPA-203ENST00000487266 SBNO1A3KN83 1393 aa22.77■■□□□ 1.24
GABPA-203ENST00000487266 NUDT16Q96DE0 195 aaKnown RBP22.77■■□□□ 1.24
GABPA-203ENST00000487266 TONSLQ96HA7 1378 aa22.76■■□□□ 1.23
GABPA-203ENST00000487266 LMOD2Q6P5Q4 547 aa22.76■■□□□ 1.23
GABPA-203ENST00000487266 CABLES1Q8TDN4 633 aa22.75■■□□□ 1.23
GABPA-203ENST00000487266 NGDNQ8NEJ9 315 aaKnown RBP22.73■■□□□ 1.23
GABPA-203ENST00000487266 GPRASP1Q5JY77 1395 aa22.73■■□□□ 1.23
GABPA-203ENST00000487266 CRYBG1Q9Y4K1 1723 aa22.72■■□□□ 1.23
GABPA-203ENST00000487266 RXRBP28702 533 aa22.72■■□□□ 1.23
GABPA-203ENST00000487266 USP21Q9UK80 565 aa22.72■■□□□ 1.23
GABPA-203ENST00000487266 ARHGEF10O15013 1369 aa22.72■■□□□ 1.23
GABPA-203ENST00000487266 QTRT2Q9H974 415 aaKnown RBP22.71■■□□□ 1.23
GABPA-203ENST00000487266 PLCH1Q4KWH8 1693 aa22.71■■□□□ 1.23
GABPA-203ENST00000487266 FNBP4Q8N3X1 1017 aaPredicted RBP22.7■■□□□ 1.22
GABPA-203ENST00000487266 CABP2Q9NPB3 220 aa22.7■■□□□ 1.22
GABPA-203ENST00000487266 RGS12O14924 1447 aa22.7■■□□□ 1.22
GABPA-203ENST00000487266 BCL9LQ86UU0 1499 aa22.7■■□□□ 1.22
GABPA-203ENST00000487266 RALGAPBQ86X10 1494 aa22.7■■□□□ 1.22
GABPA-203ENST00000487266 SRPK2P78362 688 aaKnown RBP22.69■■□□□ 1.22
GABPA-203ENST00000487266 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.68■■□□□ 1.22
GABPA-203ENST00000487266 CDK12Q9NYV4 1490 aaPredicted RBP22.67■■□□□ 1.22
GABPA-203ENST00000487266 ATRNO75882 1429 aa22.67■■□□□ 1.22
GABPA-203ENST00000487266 PPIP5K1Q6PFW1 1433 aa22.67■■□□□ 1.22
GABPA-203ENST00000487266 HAP1P54257 671 aaPredicted RBP22.67■■□□□ 1.22
GABPA-203ENST00000487266 SLIT2O94813 1529 aa22.67■■□□□ 1.22
GABPA-203ENST00000487266 POLR3AO14802 1390 aaPredicted RBP22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms