RNA–Protein interactions for RNA: ENST00000487006.2

BUD23-217, Transcript of BUD23, rRNA methyltransferase and ribosome maturation factor, humanhuman

TSL 3

Gene BUD23, Length 631 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BUD23-217ENST00000487006 PRAM1Q96QH2 718 aa31■■■□□ 2.55
BUD23-217ENST00000487006 SAFB2Q14151 953 aaKnown RBP eCLIP30.99■■■□□ 2.55
BUD23-217ENST00000487006 PHLPP1O60346 1717 aa30.98■■■□□ 2.55
BUD23-217ENST00000487006 ARHGEF28Q8N1W1 1705 aaKnown RBP30.98■■■□□ 2.55
BUD23-217ENST00000487006 NBPF1Q3BBV0 1214 aa30.98■■■□□ 2.55
BUD23-217ENST00000487006 BRINP3Q76B58 766 aa30.97■■■□□ 2.55
BUD23-217ENST00000487006 C1orf167Q5SNV9 1468 aa30.96■■■□□ 2.55
BUD23-217ENST00000487006 TRPM1Q7Z4N2 1603 aa30.95■■■□□ 2.55
BUD23-217ENST00000487006 TONSLQ96HA7 1378 aa30.95■■■□□ 2.55
BUD23-217ENST00000487006 POGKQ9P215 609 aa30.95■■■□□ 2.55
BUD23-217ENST00000487006 FMN2Q9NZ56 1722 aa30.93■■■□□ 2.54
BUD23-217ENST00000487006 AHDC1Q5TGY3 1603 aaPredicted RBP30.92■■■□□ 2.54
BUD23-217ENST00000487006 COL16A1Q07092 1604 aaPredicted RBP30.91■■■□□ 2.54
BUD23-217ENST00000487006 NHSL1Q5SYE7 1610 aa30.89■■■□□ 2.54
BUD23-217ENST00000487006 NUTM2FA1L443 756 aa30.89■■■□□ 2.54
BUD23-217ENST00000487006 NBPF8Q3BBV2 869 aa30.89■■■□□ 2.54
BUD23-217ENST00000487006 ORAI2Q96SN7 254 aa30.88■■■□□ 2.53
BUD23-217ENST00000487006 ADGRB2O60241 1585 aa30.88■■■□□ 2.53
BUD23-217ENST00000487006 MINK1Q8N4C8 1332 aaPredicted RBP30.86■■■□□ 2.53
BUD23-217ENST00000487006 DDX17Q92841 729 aaKnown RBP30.85■■■□□ 2.53
BUD23-217ENST00000487006 HIRIP3Q9BW71 556 aaPredicted RBP30.85■■■□□ 2.53
BUD23-217ENST00000487006 RGPD8O14715 1765 aaPredicted RBP30.84■■■□□ 2.53
BUD23-217ENST00000487006 ROCK2O75116 1388 aaKnown RBP30.81■■■□□ 2.52
BUD23-217ENST00000487006 ESCO1Q5FWF5 840 aa30.8■■■□□ 2.52
BUD23-217ENST00000487006 MED1Q15648 1581 aaPredicted RBP30.79■■■□□ 2.52
BUD23-217ENST00000487006 USP32Q8NFA0 1604 aa30.78■■■□□ 2.52
BUD23-217ENST00000487006 CLSPNQ9HAW4 1339 aa30.77■■■□□ 2.52
BUD23-217ENST00000487006 CCER1Q8TC90 406 aaPredicted RBP30.76■■■□□ 2.51
BUD23-217ENST00000487006 RALGAPBQ86X10 1494 aa30.75■■■□□ 2.51
BUD23-217ENST00000487006 QRICH2Q9H0J4 1663 aa30.74■■■□□ 2.51
BUD23-217ENST00000487006 JCADQ9P266 1359 aa30.74■■■□□ 2.51
BUD23-217ENST00000487006 GPRASP1Q5JY77 1395 aa30.73■■■□□ 2.51
BUD23-217ENST00000487006 KIF1AQ12756 1690 aa30.72■■■□□ 2.51
BUD23-217ENST00000487006 WASLO00401 505 aaPredicted RBP30.72■■■□□ 2.51
BUD23-217ENST00000487006 CENPJQ9HC77 1338 aaPredicted RBP30.72■■■□□ 2.51
BUD23-217ENST00000487006 SHPRHQ149N8 1683 aa30.71■■■□□ 2.51
BUD23-217ENST00000487006 DISP3Q9P2K9 1392 aa30.71■■■□□ 2.51
BUD23-217ENST00000487006 TULP4Q9NRJ4 1543 aa30.71■■■□□ 2.51
BUD23-217ENST00000487006 ANKARQ7Z5J8 1434 aa30.71■■■□□ 2.51
BUD23-217ENST00000487006 PRR36Q9H6K5 1346 aa30.7■■■□□ 2.5
BUD23-217ENST00000487006 FOXO3O43524 673 aa30.68■■■□□ 2.5
BUD23-217ENST00000487006 SOS2Q07890 1332 aaPredicted RBP30.68■■■□□ 2.5
BUD23-217ENST00000487006 XPCQ01831 940 aaPredicted RBP30.67■■■□□ 2.5
BUD23-217ENST00000487006 PXDNQ92626 1479 aa30.66■■■□□ 2.5
BUD23-217ENST00000487006 NPHP3Q7Z494 1330 aa30.66■■■□□ 2.5
BUD23-217ENST00000487006 EIF3AQ14152 1382 aaKnown RBP30.66■■■□□ 2.5
BUD23-217ENST00000487006 CARD11Q9BXL7 1154 aa30.65■■■□□ 2.5
BUD23-217ENST00000487006 PHF8Q9UPP1 1060 aa30.65■■■□□ 2.5
BUD23-217ENST00000487006 ATP7BP35670 1465 aa30.63■■■□□ 2.49
BUD23-217ENST00000487006 LRRC59Q96AG4 307 aaKnown RBP30.63■■■□□ 2.49
BUD23-217ENST00000487006 CDK19Q9BWU1 502 aa30.63■■■□□ 2.49
BUD23-217ENST00000487006 PMFBP1Q8TBY8 1022 aa30.61■■■□□ 2.49
BUD23-217ENST00000487006 PNPLA6Q8IY17 1366 aa30.61■■■□□ 2.49
BUD23-217ENST00000487006 LRP6O75581 1613 aa30.61■■■□□ 2.49
BUD23-217ENST00000487006 ITSN1Q15811 1721 aa30.61■■■□□ 2.49
BUD23-217ENST00000487006 TOPAZ1Q8N9V7 1692 aa30.58■■■□□ 2.49
BUD23-217ENST00000487006 NUDT16Q96DE0 195 aaKnown RBP30.58■■■□□ 2.49
BUD23-217ENST00000487006 TIMELESSQ9UNS1 1208 aa30.58■■■□□ 2.49
BUD23-217ENST00000487006 SPATA31A6Q5VVP1 1343 aa30.57■■■□□ 2.48
BUD23-217ENST00000487006 KRT28Q7Z3Y7 464 aa30.54■■■□□ 2.48
BUD23-217ENST00000487006 NUTM2BA6NNL0 878 aaPredicted RBP30.53■■■□□ 2.48
BUD23-217ENST00000487006 NUTM2EB1AL46 878 aaPredicted RBP30.53■■■□□ 2.48
BUD23-217ENST00000487006 SRPK2P78362 688 aaKnown RBP30.53■■■□□ 2.48
BUD23-217ENST00000487006 NUTM2AQ8IVF1 878 aaPredicted RBP30.53■■■□□ 2.48
BUD23-217ENST00000487006 PHF23Q9BUL5 403 aaPredicted RBP30.53■■■□□ 2.48
BUD23-217ENST00000487006 CABP2Q9NPB3 220 aa30.53■■■□□ 2.48
BUD23-217ENST00000487006 COL22A1Q8NFW1 1626 aaPredicted RBP30.51■■■□□ 2.47
BUD23-217ENST00000487006 PSME1Q06323 249 aa30.49■■■□□ 2.47
BUD23-217ENST00000487006 TRPM3Q9HCF6 1732 aaPredicted RBP30.49■■■□□ 2.47
BUD23-217ENST00000487006 SPATA31A3Q5VYP0 1347 aa30.47■■■□□ 2.47
BUD23-217ENST00000487006 EVC2Q86UK5 1308 aa30.47■■■□□ 2.47
BUD23-217ENST00000487006 NGDNQ8NEJ9 315 aaKnown RBP30.47■■■□□ 2.47
BUD23-217ENST00000487006 CCDC61Q9Y6R9 512 aa30.47■■■□□ 2.47
BUD23-217ENST00000487006 TNS3Q68CZ2 1445 aa30.46■■■□□ 2.47
BUD23-217ENST00000487006 SBNO2Q9Y2G9 1366 aa30.45■■■□□ 2.47
BUD23-217ENST00000487006 MEX3CQ5U5Q3 659 aaKnown RBP30.45■■■□□ 2.47
BUD23-217ENST00000487006 RGS17Q9UGC6 210 aaPredicted RBP30.44■■■□□ 2.46
BUD23-217ENST00000487006 PPIP5K1Q6PFW1 1433 aa30.44■■■□□ 2.46
BUD23-217ENST00000487006 SBNO1A3KN83 1393 aa30.43■■■□□ 2.46
BUD23-217ENST00000487006 USP47Q96K76 1375 aa30.41■■■□□ 2.46
BUD23-217ENST00000487006 ACEP12821 1306 aa30.41■■■□□ 2.46
BUD23-217ENST00000487006 POLR3AO14802 1390 aaPredicted RBP30.41■■■□□ 2.46
BUD23-217ENST00000487006 ALS2Q96Q42 1657 aa30.4■■■□□ 2.46
BUD23-217ENST00000487006 ST20-MTHFSA0A0A6YYL1 179 aa30.4■■■□□ 2.46
BUD23-217ENST00000487006 PLEKHG3A1L390 1219 aa30.4■■■□□ 2.46
BUD23-217ENST00000487006 ILDR2Q71H61 639 aa30.4■■■□□ 2.46
BUD23-217ENST00000487006 LMOD2Q6P5Q4 547 aa30.39■■■□□ 2.46
BUD23-217ENST00000487006 ADAMTS2O95450 1211 aa30.38■■■□□ 2.45
BUD23-217ENST00000487006 PLEKHG5O94827 1062 aa30.37■■■□□ 2.45
BUD23-217ENST00000487006 TESK2Q96S53 571 aa30.36■■■□□ 2.45
BUD23-217ENST00000487006 CABP1Q9NZU7 370 aa30.36■■■□□ 2.45
BUD23-217ENST00000487006 ABCA3Q99758 1704 aa30.36■■■□□ 2.45
BUD23-217ENST00000487006 ARHGEF10O15013 1369 aa30.34■■■□□ 2.45
BUD23-217ENST00000487006 MARF1Q9Y4F3 1742 aaKnown RBP30.33■■■□□ 2.45
BUD23-217ENST00000487006 PAK3O75914 559 aaPredicted RBP30.33■■■□□ 2.45
BUD23-217ENST00000487006 C8orf37Q96NL8 207 aa30.33■■■□□ 2.45
BUD23-217ENST00000487006 CABLES1Q8TDN4 633 aa30.32■■■□□ 2.44
BUD23-217ENST00000487006 ATAD2Q6PL18 1390 aa30.31■■■□□ 2.44
BUD23-217ENST00000487006 POTEAQ6S8J7 498 aa30.29■■■□□ 2.44
BUD23-217ENST00000487006 AKAP12Q02952 1782 aa30.28■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms