RNA–Protein interactions for RNA: ENST00000486429.1

CLDN11-206, Transcript of claudin 11, humanhuman

TSL 2

Gene CLDN11, Length 998 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-206ENST00000486429 SHPRHQ149N8 1683 aa26.7■■□□□ 1.86
CLDN11-206ENST00000486429 WAPLQ7Z5K2 1190 aa26.69■■□□□ 1.86
CLDN11-206ENST00000486429 STAC3Q96MF2 364 aa26.69■■□□□ 1.86
CLDN11-206ENST00000486429 DLC1Q96QB1 1528 aa26.67■■□□□ 1.86
CLDN11-206ENST00000486429 SIRT1Q96EB6 747 aa26.64■■□□□ 1.86
CLDN11-206ENST00000486429 FMN2Q9NZ56 1722 aa26.63■■□□□ 1.85
CLDN11-206ENST00000486429 SPATA31A6Q5VVP1 1343 aa26.62■■□□□ 1.85
CLDN11-206ENST00000486429 ORAI2Q96SN7 254 aa26.61■■□□□ 1.85
CLDN11-206ENST00000486429 LRP6O75581 1613 aa26.59■■□□□ 1.85
CLDN11-206ENST00000486429 DDX17Q92841 729 aaKnown RBP26.59■■□□□ 1.85
CLDN11-206ENST00000486429 PRAM1Q96QH2 718 aa26.58■■□□□ 1.85
CLDN11-206ENST00000486429 KIAA1210Q9ULL0 1709 aa26.56■■□□□ 1.84
CLDN11-206ENST00000486429 ADGRB2O60241 1585 aa26.56■■□□□ 1.84
CLDN11-206ENST00000486429 LRRC59Q96AG4 307 aaKnown RBP26.56■■□□□ 1.84
CLDN11-206ENST00000486429 ESCO1Q5FWF5 840 aa26.55■■□□□ 1.84
CLDN11-206ENST00000486429 POGKQ9P215 609 aa26.55■■□□□ 1.84
CLDN11-206ENST00000486429 KIF1AQ12756 1690 aa26.54■■□□□ 1.84
CLDN11-206ENST00000486429 NUTM2FA1L443 756 aa26.54■■□□□ 1.84
CLDN11-206ENST00000486429 TRIM26Q12899 539 aaPredicted RBP26.54■■□□□ 1.84
CLDN11-206ENST00000486429 SAFB2Q14151 953 aaKnown RBP eCLIP26.54■■□□□ 1.84
CLDN11-206ENST00000486429 TRAK1Q9UPV9 953 aa26.54■■□□□ 1.84
CLDN11-206ENST00000486429 PNPLA6Q8IY17 1366 aa26.53■■□□□ 1.84
CLDN11-206ENST00000486429 ARHGEF28Q8N1W1 1705 aaKnown RBP26.53■■□□□ 1.84
CLDN11-206ENST00000486429 SOCS7O14512 581 aa26.52■■□□□ 1.84
CLDN11-206ENST00000486429 SOS2Q07890 1332 aaPredicted RBP26.52■■□□□ 1.84
CLDN11-206ENST00000486429 RGS17Q9UGC6 210 aaPredicted RBP26.52■■□□□ 1.84
CLDN11-206ENST00000486429 NPHP3Q7Z494 1330 aa26.51■■□□□ 1.83
CLDN11-206ENST00000486429 MEX3CQ5U5Q3 659 aaKnown RBP26.51■■□□□ 1.83
CLDN11-206ENST00000486429 PXDNQ92626 1479 aa26.49■■□□□ 1.83
CLDN11-206ENST00000486429 NUTM2BA6NNL0 878 aaPredicted RBP26.47■■□□□ 1.83
CLDN11-206ENST00000486429 NUTM2EB1AL46 878 aaPredicted RBP26.47■■□□□ 1.83
CLDN11-206ENST00000486429 NUTM2AQ8IVF1 878 aaPredicted RBP26.47■■□□□ 1.83
CLDN11-206ENST00000486429 SIN3AQ96ST3 1273 aa26.46■■□□□ 1.83
CLDN11-206ENST00000486429 ANKARQ7Z5J8 1434 aa26.46■■□□□ 1.83
CLDN11-206ENST00000486429 RGPD8O14715 1765 aaPredicted RBP26.45■■□□□ 1.82
CLDN11-206ENST00000486429 USP32Q8NFA0 1604 aa26.44■■□□□ 1.82
CLDN11-206ENST00000486429 FOXO3O43524 673 aa26.44■■□□□ 1.82
CLDN11-206ENST00000486429 EIF3AQ14152 1382 aaKnown RBP26.44■■□□□ 1.82
CLDN11-206ENST00000486429 COL22A1Q8NFW1 1626 aaPredicted RBP26.43■■□□□ 1.82
CLDN11-206ENST00000486429 MINK1Q8N4C8 1332 aaPredicted RBP26.43■■□□□ 1.82
CLDN11-206ENST00000486429 L3MBTL2Q969R5 705 aa26.43■■□□□ 1.82
CLDN11-206ENST00000486429 HIRIP3Q9BW71 556 aaPredicted RBP26.42■■□□□ 1.82
CLDN11-206ENST00000486429 TULP4Q9NRJ4 1543 aa26.41■■□□□ 1.82
CLDN11-206ENST00000486429 NEUROD1Q13562 356 aa26.41■■□□□ 1.82
CLDN11-206ENST00000486429 XPCQ01831 940 aaPredicted RBP26.4■■□□□ 1.82
CLDN11-206ENST00000486429 POTEAQ6S8J7 498 aa26.4■■□□□ 1.82
CLDN11-206ENST00000486429 PHF8Q9UPP1 1060 aa26.39■■□□□ 1.82
CLDN11-206ENST00000486429 TRPM1Q7Z4N2 1603 aa26.37■■□□□ 1.81
CLDN11-206ENST00000486429 NBPF1Q3BBV0 1214 aa26.37■■□□□ 1.81
CLDN11-206ENST00000486429 WASLO00401 505 aaPredicted RBP26.35■■□□□ 1.81
CLDN11-206ENST00000486429 ZNF772Q68DY9 489 aaPredicted RBP26.35■■□□□ 1.81
CLDN11-206ENST00000486429 ITSN1Q15811 1721 aa26.33■■□□□ 1.81
CLDN11-206ENST00000486429 KRT28Q7Z3Y7 464 aa26.32■■□□□ 1.8
CLDN11-206ENST00000486429 AFF2P51816 1311 aa26.32■■□□□ 1.8
CLDN11-206ENST00000486429 PRR36Q9H6K5 1346 aa26.32■■□□□ 1.8
CLDN11-206ENST00000486429 TNS3Q68CZ2 1445 aa26.31■■□□□ 1.8
CLDN11-206ENST00000486429 ATP7BP35670 1465 aa26.31■■□□□ 1.8
CLDN11-206ENST00000486429 ADAMTS2O95450 1211 aa26.31■■□□□ 1.8
CLDN11-206ENST00000486429 C8orf37Q96NL8 207 aa26.31■■□□□ 1.8
CLDN11-206ENST00000486429 SPATA31A3Q5VYP0 1347 aa26.31■■□□□ 1.8
CLDN11-206ENST00000486429 PMFBP1Q8TBY8 1022 aa26.29■■□□□ 1.8
CLDN11-206ENST00000486429 QRICH2Q9H0J4 1663 aa26.28■■□□□ 1.8
CLDN11-206ENST00000486429 PSME1Q06323 249 aa26.28■■□□□ 1.8
CLDN11-206ENST00000486429 SBNO1A3KN83 1393 aa26.28■■□□□ 1.8
CLDN11-206ENST00000486429 CENPJQ9HC77 1338 aaPredicted RBP26.27■■□□□ 1.8
CLDN11-206ENST00000486429 TONSLQ96HA7 1378 aa26.27■■□□□ 1.8
CLDN11-206ENST00000486429 MARF1Q9Y4F3 1742 aaKnown RBP26.26■■□□□ 1.79
CLDN11-206ENST00000486429 TOPAZ1Q8N9V7 1692 aa26.26■■□□□ 1.79
CLDN11-206ENST00000486429 ROCK2O75116 1388 aaKnown RBP26.26■■□□□ 1.79
CLDN11-206ENST00000486429 TRPM3Q9HCF6 1732 aaPredicted RBP26.25■■□□□ 1.79
CLDN11-206ENST00000486429 GPRASP1Q5JY77 1395 aa26.24■■□□□ 1.79
CLDN11-206ENST00000486429 NGLY1Q96IV0 654 aa26.24■■□□□ 1.79
CLDN11-206ENST00000486429 ARHGEF10O15013 1369 aa26.23■■□□□ 1.79
CLDN11-206ENST00000486429 NUDT16Q96DE0 195 aaKnown RBP26.22■■□□□ 1.79
CLDN11-206ENST00000486429 CDK19Q9BWU1 502 aa26.22■■□□□ 1.79
CLDN11-206ENST00000486429 ABCA3Q99758 1704 aa26.21■■□□□ 1.79
CLDN11-206ENST00000486429 NGDNQ8NEJ9 315 aaKnown RBP26.19■■□□□ 1.78
CLDN11-206ENST00000486429 ALS2Q96Q42 1657 aa26.19■■□□□ 1.78
CLDN11-206ENST00000486429 NBPF8Q3BBV2 869 aa26.18■■□□□ 1.78
CLDN11-206ENST00000486429 LMOD2Q6P5Q4 547 aa26.18■■□□□ 1.78
CLDN11-206ENST00000486429 RALGAPBQ86X10 1494 aa26.17■■□□□ 1.78
CLDN11-206ENST00000486429 RXRBP28702 533 aa26.17■■□□□ 1.78
CLDN11-206ENST00000486429 CDK12Q9NYV4 1490 aaPredicted RBP26.17■■□□□ 1.78
CLDN11-206ENST00000486429 HAP1P54257 671 aaPredicted RBP26.16■■□□□ 1.78
CLDN11-206ENST00000486429 USP21Q9UK80 565 aa26.16■■□□□ 1.78
CLDN11-206ENST00000486429 SRPK2P78362 688 aaKnown RBP26.15■■□□□ 1.78
CLDN11-206ENST00000486429 FNBP4Q8N3X1 1017 aaPredicted RBP26.15■■□□□ 1.78
CLDN11-206ENST00000486429 CCDC61Q9Y6R9 512 aa26.14■■□□□ 1.78
CLDN11-206ENST00000486429 POLR3AO14802 1390 aaPredicted RBP26.13■■□□□ 1.77
CLDN11-206ENST00000486429 QTRT2Q9H974 415 aaKnown RBP26.13■■□□□ 1.77
CLDN11-206ENST00000486429 PLEKHG5O94827 1062 aa26.12■■□□□ 1.77
CLDN11-206ENST00000486429 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.11■■□□□ 1.77
CLDN11-206ENST00000486429 RBM6P78332 1123 aaKnown RBP26.11■■□□□ 1.77
CLDN11-206ENST00000486429 CABLES1Q8TDN4 633 aa26.11■■□□□ 1.77
CLDN11-206ENST00000486429 ATRNO75882 1429 aa26.11■■□□□ 1.77
CLDN11-206ENST00000486429 PPIP5K1Q6PFW1 1433 aa26.11■■□□□ 1.77
CLDN11-206ENST00000486429 TRPC5Q9UL62 973 aaPredicted RBP26.1■■□□□ 1.77
CLDN11-206ENST00000486429 BCL9LQ86UU0 1499 aa26.1■■□□□ 1.77
CLDN11-206ENST00000486429 RGS12O14924 1447 aa26.09■■□□□ 1.77
CLDN11-206ENST00000486429 PAK3O75914 559 aaPredicted RBP26.09■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms