RNA–Protein interactions for RNA: ENST00000486028.1

HMG20B-211, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-211ENST00000486028 KNDC1Q76NI1 1749 aa17.86■□□□□ 0.45
HMG20B-211ENST00000486028 MST1RQ04912 1400 aa17.85■□□□□ 0.45
HMG20B-211ENST00000486028 NBPF1Q3BBV0 1214 aa17.85■□□□□ 0.45
HMG20B-211ENST00000486028 BRINP3Q76B58 766 aa17.85■□□□□ 0.45
HMG20B-211ENST00000486028 TONSLQ96HA7 1378 aa17.85■□□□□ 0.45
HMG20B-211ENST00000486028 ROBO1Q9Y6N7 1651 aa17.85■□□□□ 0.45
HMG20B-211ENST00000486028 NALCNQ8IZF0 1738 aa17.84■□□□□ 0.45
HMG20B-211ENST00000486028 DLC1Q96QB1 1528 aa17.84■□□□□ 0.45
HMG20B-211ENST00000486028 SAFB2Q14151 953 aaKnown RBP eCLIP17.84■□□□□ 0.45
HMG20B-211ENST00000486028 C1orf167Q5SNV9 1468 aa17.82■□□□□ 0.44
HMG20B-211ENST00000486028 KIAA1210Q9ULL0 1709 aa17.81■□□□□ 0.44
HMG20B-211ENST00000486028 CLSPNQ9HAW4 1339 aa17.81■□□□□ 0.44
HMG20B-211ENST00000486028 PIAS4Q8N2W9 510 aaPredicted RBP17.8■□□□□ 0.44
HMG20B-211ENST00000486028 CDC42BPGQ6DT37 1551 aa17.79■□□□□ 0.44
HMG20B-211ENST00000486028 ORAI2Q96SN7 254 aa17.79■□□□□ 0.44
HMG20B-211ENST00000486028 MINK1Q8N4C8 1332 aaPredicted RBP17.78■□□□□ 0.44
HMG20B-211ENST00000486028 NUTM2FA1L443 756 aa17.78■□□□□ 0.44
HMG20B-211ENST00000486028 ESCO1Q5FWF5 840 aa17.78■□□□□ 0.44
HMG20B-211ENST00000486028 CCER1Q8TC90 406 aaPredicted RBP17.78■□□□□ 0.44
HMG20B-211ENST00000486028 NBPF8Q3BBV2 869 aa17.77■□□□□ 0.44
HMG20B-211ENST00000486028 HIRIP3Q9BW71 556 aaPredicted RBP17.76■□□□□ 0.43
HMG20B-211ENST00000486028 ROCK2O75116 1388 aaKnown RBP17.76■□□□□ 0.43
HMG20B-211ENST00000486028 PHLPP1O60346 1717 aa17.75■□□□□ 0.43
HMG20B-211ENST00000486028 AHDC1Q5TGY3 1603 aaPredicted RBP17.74■□□□□ 0.43
HMG20B-211ENST00000486028 DDX17Q92841 729 aaKnown RBP17.74■□□□□ 0.43
HMG20B-211ENST00000486028 TIMELESSQ9UNS1 1208 aa17.74■□□□□ 0.43
HMG20B-211ENST00000486028 WASLO00401 505 aaPredicted RBP17.73■□□□□ 0.43
HMG20B-211ENST00000486028 JCADQ9P266 1359 aa17.73■□□□□ 0.43
HMG20B-211ENST00000486028 EIF3AQ14152 1382 aaKnown RBP17.72■□□□□ 0.43
HMG20B-211ENST00000486028 LRRC59Q96AG4 307 aaKnown RBP17.72■□□□□ 0.43
HMG20B-211ENST00000486028 CENPJQ9HC77 1338 aaPredicted RBP17.72■□□□□ 0.43
HMG20B-211ENST00000486028 FOXO3O43524 673 aa17.71■□□□□ 0.43
HMG20B-211ENST00000486028 TRPM1Q7Z4N2 1603 aa17.71■□□□□ 0.43
HMG20B-211ENST00000486028 NPHP3Q7Z494 1330 aa17.71■□□□□ 0.42
HMG20B-211ENST00000486028 ARHGEF28Q8N1W1 1705 aaKnown RBP17.7■□□□□ 0.42
HMG20B-211ENST00000486028 CARD11Q9BXL7 1154 aa17.7■□□□□ 0.42
HMG20B-211ENST00000486028 FMN2Q9NZ56 1722 aa17.69■□□□□ 0.42
HMG20B-211ENST00000486028 COL16A1Q07092 1604 aaPredicted RBP17.69■□□□□ 0.42
HMG20B-211ENST00000486028 GPRASP1Q5JY77 1395 aa17.69■□□□□ 0.42
HMG20B-211ENST00000486028 DISP3Q9P2K9 1392 aa17.69■□□□□ 0.42
HMG20B-211ENST00000486028 CDK19Q9BWU1 502 aa17.69■□□□□ 0.42
HMG20B-211ENST00000486028 PHF8Q9UPP1 1060 aa17.69■□□□□ 0.42
HMG20B-211ENST00000486028 ANKARQ7Z5J8 1434 aa17.69■□□□□ 0.42
HMG20B-211ENST00000486028 ADGRB2O60241 1585 aa17.69■□□□□ 0.42
HMG20B-211ENST00000486028 SOS2Q07890 1332 aaPredicted RBP17.69■□□□□ 0.42
HMG20B-211ENST00000486028 NPM3O75607 178 aaKnown RBP17.68■□□□□ 0.42
HMG20B-211ENST00000486028 NHSL1Q5SYE7 1610 aa17.67■□□□□ 0.42
HMG20B-211ENST00000486028 SPATA31A6Q5VVP1 1343 aa17.67■□□□□ 0.42
HMG20B-211ENST00000486028 RALGAPBQ86X10 1494 aa17.66■□□□□ 0.42
HMG20B-211ENST00000486028 XPCQ01831 940 aaPredicted RBP17.65■□□□□ 0.42
HMG20B-211ENST00000486028 NUDT16Q96DE0 195 aaKnown RBP17.65■□□□□ 0.42
HMG20B-211ENST00000486028 TULP4Q9NRJ4 1543 aa17.64■□□□□ 0.41
HMG20B-211ENST00000486028 PSME1Q06323 249 aa17.64■□□□□ 0.41
HMG20B-211ENST00000486028 KRT28Q7Z3Y7 464 aa17.64■□□□□ 0.41
HMG20B-211ENST00000486028 PMFBP1Q8TBY8 1022 aa17.64■□□□□ 0.41
HMG20B-211ENST00000486028 MED1Q15648 1581 aaPredicted RBP17.64■□□□□ 0.41
HMG20B-211ENST00000486028 PRR36Q9H6K5 1346 aa17.64■□□□□ 0.41
HMG20B-211ENST00000486028 SRPK2P78362 688 aaKnown RBP17.63■□□□□ 0.41
HMG20B-211ENST00000486028 CCDC61Q9Y6R9 512 aa17.62■□□□□ 0.41
HMG20B-211ENST00000486028 EVC2Q86UK5 1308 aa17.62■□□□□ 0.41
HMG20B-211ENST00000486028 KIF1AQ12756 1690 aa17.61■□□□□ 0.41
HMG20B-211ENST00000486028 NUTM2BA6NNL0 878 aaPredicted RBP17.61■□□□□ 0.41
HMG20B-211ENST00000486028 NUTM2EB1AL46 878 aaPredicted RBP17.61■□□□□ 0.41
HMG20B-211ENST00000486028 NUTM2AQ8IVF1 878 aaPredicted RBP17.61■□□□□ 0.41
HMG20B-211ENST00000486028 NGDNQ8NEJ9 315 aaKnown RBP17.61■□□□□ 0.41
HMG20B-211ENST00000486028 PNPLA6Q8IY17 1366 aa17.61■□□□□ 0.41
HMG20B-211ENST00000486028 PXDNQ92626 1479 aa17.61■□□□□ 0.41
HMG20B-211ENST00000486028 MEX3CQ5U5Q3 659 aaKnown RBP17.6■□□□□ 0.41
HMG20B-211ENST00000486028 CABP2Q9NPB3 220 aa17.6■□□□□ 0.41
HMG20B-211ENST00000486028 RGPD8O14715 1765 aaPredicted RBP17.6■□□□□ 0.41
HMG20B-211ENST00000486028 SHPRHQ149N8 1683 aa17.59■□□□□ 0.41
HMG20B-211ENST00000486028 USP32Q8NFA0 1604 aa17.59■□□□□ 0.41
HMG20B-211ENST00000486028 QRICH2Q9H0J4 1663 aa17.58■□□□□ 0.41
HMG20B-211ENST00000486028 SPATA31A3Q5VYP0 1347 aa17.58■□□□□ 0.4
HMG20B-211ENST00000486028 ATP7BP35670 1465 aa17.57■□□□□ 0.4
HMG20B-211ENST00000486028 PLEKHG3A1L390 1219 aa17.57■□□□□ 0.4
HMG20B-211ENST00000486028 SBNO1A3KN83 1393 aa17.56■□□□□ 0.4
HMG20B-211ENST00000486028 SLC24A1O60721 1099 aa17.56■□□□□ 0.4
HMG20B-211ENST00000486028 SBNO2Q9Y2G9 1366 aa17.55■□□□□ 0.4
HMG20B-211ENST00000486028 ST20-MTHFSA0A0A6YYL1 179 aa17.54■□□□□ 0.4
HMG20B-211ENST00000486028 LMOD2Q6P5Q4 547 aa17.54■□□□□ 0.4
HMG20B-211ENST00000486028 ACEP12821 1306 aa17.53■□□□□ 0.4
HMG20B-211ENST00000486028 CABP1Q9NZU7 370 aa17.53■□□□□ 0.4
HMG20B-211ENST00000486028 LRP6O75581 1613 aa17.53■□□□□ 0.4
HMG20B-211ENST00000486028 PAK3O75914 559 aaPredicted RBP17.52■□□□□ 0.4
HMG20B-211ENST00000486028 ADAMTS2O95450 1211 aa17.52■□□□□ 0.4
HMG20B-211ENST00000486028 TNS3Q68CZ2 1445 aa17.52■□□□□ 0.4
HMG20B-211ENST00000486028 PPIP5K1Q6PFW1 1433 aa17.52■□□□□ 0.4
HMG20B-211ENST00000486028 ITSN1Q15811 1721 aa17.52■□□□□ 0.39
HMG20B-211ENST00000486028 POLR3AO14802 1390 aaPredicted RBP17.52■□□□□ 0.39
HMG20B-211ENST00000486028 ARHGEF10O15013 1369 aa17.52■□□□□ 0.39
HMG20B-211ENST00000486028 RGS17Q9UGC6 210 aaPredicted RBP17.51■□□□□ 0.39
HMG20B-211ENST00000486028 USP47Q96K76 1375 aa17.51■□□□□ 0.39
HMG20B-211ENST00000486028 TESK2Q96S53 571 aa17.5■□□□□ 0.39
HMG20B-211ENST00000486028 ATAD2Q6PL18 1390 aa17.5■□□□□ 0.39
HMG20B-211ENST00000486028 HAP1P54257 671 aaPredicted RBP17.49■□□□□ 0.39
HMG20B-211ENST00000486028 C8orf37Q96NL8 207 aa17.49■□□□□ 0.39
HMG20B-211ENST00000486028 PUS7Q96PZ0 661 aaKnown RBP17.49■□□□□ 0.39
HMG20B-211ENST00000486028 COL22A1Q8NFW1 1626 aaPredicted RBP17.48■□□□□ 0.39
HMG20B-211ENST00000486028 ZNF772Q68DY9 489 aaPredicted RBP17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 125 ms