RNA–Protein interactions for RNA: ENST00000485976.5

NECAB3-212, Transcript of N-terminal EF-hand calcium binding protein 3, human

TSL 5

Gene NECAB3, Length 1,016 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NECAB3-212	ENST00000485976	ADGRB1	O14514	1584 aa		32.75	■■■□□ 2.83
NECAB3-212	ENST00000485976	WAPL	Q7Z5K2	1190 aa		32.72	■■■□□ 2.83
NECAB3-212	ENST00000485976	SHPRH	Q149N8	1683 aa		32.71	■■■□□ 2.83
NECAB3-212	ENST00000485976	PHF23	Q9BUL5	403 aa	Predicted RBP	32.7	■■■□□ 2.83
NECAB3-212	ENST00000485976	PLEKHH1	Q9ULM0	1364 aa		32.68	■■■□□ 2.82
NECAB3-212	ENST00000485976	KIAA1210	Q9ULL0	1709 aa		32.68	■■■□□ 2.82
NECAB3-212	ENST00000485976	SPATA31A6	Q5VVP1	1343 aa		32.66	■■■□□ 2.82
NECAB3-212	ENST00000485976	FMN2	Q9NZ56	1722 aa		32.64	■■■□□ 2.82
NECAB3-212	ENST00000485976	LRRC59	Q96AG4	307 aa	Known RBP	32.62	■■■□□ 2.81
NECAB3-212	ENST00000485976	ILDR2	Q71H61	639 aa		32.61	■■■□□ 2.81
NECAB3-212	ENST00000485976	PRAM1	Q96QH2	718 aa		32.61	■■■□□ 2.81
NECAB3-212	ENST00000485976	ORAI2	Q96SN7	254 aa		32.6	■■■□□ 2.81
NECAB3-212	ENST00000485976	POGK	Q9P215	609 aa		32.59	■■■□□ 2.81
NECAB3-212	ENST00000485976	ADGRB2	O60241	1585 aa		32.58	■■■□□ 2.81
NECAB3-212	ENST00000485976	TRAK1	Q9UPV9	953 aa		32.57	■■■□□ 2.8
NECAB3-212	ENST00000485976	SOS2	Q07890	1332 aa	Predicted RBP	32.55	■■■□□ 2.8
NECAB3-212	ENST00000485976	ESCO1	Q5FWF5	840 aa		32.55	■■■□□ 2.8
NECAB3-212	ENST00000485976	KIF1A	Q12756	1690 aa		32.55	■■■□□ 2.8
NECAB3-212	ENST00000485976	NPHP3	Q7Z494	1330 aa		32.54	■■■□□ 2.8
NECAB3-212	ENST00000485976	ARHGEF28	Q8N1W1	1705 aa	Known RBP	32.54	■■■□□ 2.8
NECAB3-212	ENST00000485976	DDX17	Q92841	729 aa	Known RBP	32.51	■■■□□ 2.79
NECAB3-212	ENST00000485976	SAFB2	Q14151	953 aa	Known RBP eCLIP	32.5	■■■□□ 2.79
NECAB3-212	ENST00000485976	EIF3A	Q14152	1382 aa	Known RBP	32.49	■■■□□ 2.79
NECAB3-212	ENST00000485976	L3MBTL2	Q969R5	705 aa		32.49	■■■□□ 2.79
NECAB3-212	ENST00000485976	ANKAR	Q7Z5J8	1434 aa		32.49	■■■□□ 2.79
NECAB3-212	ENST00000485976	LRP6	O75581	1613 aa		32.48	■■■□□ 2.79
NECAB3-212	ENST00000485976	PNPLA6	Q8IY17	1366 aa		32.48	■■■□□ 2.79
NECAB3-212	ENST00000485976	SIN3A	Q96ST3	1273 aa		32.48	■■■□□ 2.79
NECAB3-212	ENST00000485976	NUTM2F	A1L443	756 aa		32.46	■■■□□ 2.79
NECAB3-212	ENST00000485976	RGPD8	O14715	1765 aa	Predicted RBP	32.45	■■■□□ 2.79
NECAB3-212	ENST00000485976	RGS17	Q9UGC6	210 aa	Predicted RBP	32.45	■■■□□ 2.79
NECAB3-212	ENST00000485976	PXDN	Q92626	1479 aa		32.45	■■■□□ 2.79
NECAB3-212	ENST00000485976	NEUROD1	Q13562	356 aa		32.44	■■■□□ 2.78
NECAB3-212	ENST00000485976	MEX3C	Q5U5Q3	659 aa	Known RBP	32.43	■■■□□ 2.78
NECAB3-212	ENST00000485976	SOCS7	O14512	581 aa		32.42	■■■□□ 2.78
NECAB3-212	ENST00000485976	FOXO3	O43524	673 aa		32.42	■■■□□ 2.78
NECAB3-212	ENST00000485976	COL22A1	Q8NFW1	1626 aa	Predicted RBP	32.4	■■■□□ 2.78
NECAB3-212	ENST00000485976	MINK1	Q8N4C8	1332 aa	Predicted RBP	32.4	■■■□□ 2.78
NECAB3-212	ENST00000485976	TULP4	Q9NRJ4	1543 aa		32.4	■■■□□ 2.78
NECAB3-212	ENST00000485976	USP32	Q8NFA0	1604 aa		32.39	■■■□□ 2.78
NECAB3-212	ENST00000485976	NBPF1	Q3BBV0	1214 aa		32.38	■■■□□ 2.77
NECAB3-212	ENST00000485976	PHF8	Q9UPP1	1060 aa		32.38	■■■□□ 2.77
NECAB3-212	ENST00000485976	TRPM1	Q7Z4N2	1603 aa		32.37	■■■□□ 2.77
NECAB3-212	ENST00000485976	WASL	O00401	505 aa	Predicted RBP	32.37	■■■□□ 2.77
NECAB3-212	ENST00000485976	NUTM2B	A6NNL0	878 aa	Predicted RBP	32.36	■■■□□ 2.77
NECAB3-212	ENST00000485976	NUTM2E	B1AL46	878 aa	Predicted RBP	32.36	■■■□□ 2.77
NECAB3-212	ENST00000485976	NUTM2A	Q8IVF1	878 aa	Predicted RBP	32.36	■■■□□ 2.77
NECAB3-212	ENST00000485976	HIRIP3	Q9BW71	556 aa	Predicted RBP	32.36	■■■□□ 2.77
NECAB3-212	ENST00000485976	ZNF772	Q68DY9	489 aa	Predicted RBP	32.33	■■■□□ 2.77
NECAB3-212	ENST00000485976	ITSN1	Q15811	1721 aa		32.32	■■■□□ 2.76
NECAB3-212	ENST00000485976	PSME1	Q06323	249 aa		32.32	■■■□□ 2.76
NECAB3-212	ENST00000485976	KRT28	Q7Z3Y7	464 aa		32.3	■■■□□ 2.76
NECAB3-212	ENST00000485976	TONSL	Q96HA7	1378 aa		32.3	■■■□□ 2.76
NECAB3-212	ENST00000485976	POTEA	Q6S8J7	498 aa		32.29	■■■□□ 2.76
NECAB3-212	ENST00000485976	SPATA31A3	Q5VYP0	1347 aa		32.28	■■■□□ 2.76
NECAB3-212	ENST00000485976	XPC	Q01831	940 aa	Predicted RBP	32.28	■■■□□ 2.76
NECAB3-212	ENST00000485976	CENPJ	Q9HC77	1338 aa	Predicted RBP	32.27	■■■□□ 2.76
NECAB3-212	ENST00000485976	SBNO1	A3KN83	1393 aa		32.27	■■■□□ 2.76
NECAB3-212	ENST00000485976	ROCK2	O75116	1388 aa	Known RBP	32.26	■■■□□ 2.75
NECAB3-212	ENST00000485976	TNS3	Q68CZ2	1445 aa		32.26	■■■□□ 2.75
NECAB3-212	ENST00000485976	PRR36	Q9H6K5	1346 aa		32.26	■■■□□ 2.75
NECAB3-212	ENST00000485976	ATP7B	P35670	1465 aa		32.25	■■■□□ 2.75
NECAB3-212	ENST00000485976	QRICH2	Q9H0J4	1663 aa		32.24	■■■□□ 2.75
NECAB3-212	ENST00000485976	GPRASP1	Q5JY77	1395 aa		32.22	■■■□□ 2.75
NECAB3-212	ENST00000485976	PMFBP1	Q8TBY8	1022 aa		32.22	■■■□□ 2.75
NECAB3-212	ENST00000485976	C8orf37	Q96NL8	207 aa		32.21	■■■□□ 2.75
NECAB3-212	ENST00000485976	CDK19	Q9BWU1	502 aa		32.21	■■■□□ 2.75
NECAB3-212	ENST00000485976	AFF2	P51816	1311 aa		32.21	■■■□□ 2.75
NECAB3-212	ENST00000485976	ARHGEF10	O15013	1369 aa		32.2	■■■□□ 2.75
NECAB3-212	ENST00000485976	MARF1	Q9Y4F3	1742 aa	Known RBP	32.2	■■■□□ 2.75
NECAB3-212	ENST00000485976	NUDT16	Q96DE0	195 aa	Known RBP	32.2	■■■□□ 2.75
NECAB3-212	ENST00000485976	TOPAZ1	Q8N9V7	1692 aa		32.19	■■■□□ 2.74
NECAB3-212	ENST00000485976	TRPM3	Q9HCF6	1732 aa	Predicted RBP	32.17	■■■□□ 2.74
NECAB3-212	ENST00000485976	ADAMTS2	O95450	1211 aa		32.17	■■■□□ 2.74
NECAB3-212	ENST00000485976	NBPF8	Q3BBV2	869 aa		32.16	■■■□□ 2.74
NECAB3-212	ENST00000485976	NGLY1	Q96IV0	654 aa		32.16	■■■□□ 2.74
NECAB3-212	ENST00000485976	NGDN	Q8NEJ9	315 aa	Known RBP	32.15	■■■□□ 2.74
NECAB3-212	ENST00000485976	CCDC61	Q9Y6R9	512 aa		32.15	■■■□□ 2.74
NECAB3-212	ENST00000485976	RALGAPB	Q86X10	1494 aa		32.15	■■■□□ 2.74
NECAB3-212	ENST00000485976	CLSPN	Q9HAW4	1339 aa		32.13	■■■□□ 2.73
NECAB3-212	ENST00000485976	ALS2	Q96Q42	1657 aa		32.11	■■■□□ 2.73
NECAB3-212	ENST00000485976	FNBP4	Q8N3X1	1017 aa	Predicted RBP	32.11	■■■□□ 2.73
NECAB3-212	ENST00000485976	POLR3A	O14802	1390 aa	Predicted RBP	32.1	■■■□□ 2.73
NECAB3-212	ENST00000485976	PLEKHG3	A1L390	1219 aa		32.09	■■■□□ 2.73
NECAB3-212	ENST00000485976	RXRB	P28702	533 aa		32.09	■■■□□ 2.73
NECAB3-212	ENST00000485976	SRPK2	P78362	688 aa	Known RBP	32.09	■■■□□ 2.73
NECAB3-212	ENST00000485976	CDK12	Q9NYV4	1490 aa	Predicted RBP	32.09	■■■□□ 2.73
NECAB3-212	ENST00000485976	EVC2	Q86UK5	1308 aa		32.08	■■■□□ 2.73
NECAB3-212	ENST00000485976	ABCA3	Q99758	1704 aa		32.08	■■■□□ 2.73
NECAB3-212	ENST00000485976	SBNO2	Q9Y2G9	1366 aa		32.07	■■■□□ 2.72
NECAB3-212	ENST00000485976	LMOD2	Q6P5Q4	547 aa		32.06	■■■□□ 2.72
NECAB3-212	ENST00000485976	CARD11	Q9BXL7	1154 aa		32.06	■■■□□ 2.72
NECAB3-212	ENST00000485976	HAP1	P54257	671 aa	Predicted RBP	32.05	■■■□□ 2.72
NECAB3-212	ENST00000485976	PCGF6	Q9BYE7	350 aa		32.05	■■■□□ 2.72
NECAB3-212	ENST00000485976	USP21	Q9UK80	565 aa		32.05	■■■□□ 2.72
NECAB3-212	ENST00000485976	QTRT2	Q9H974	415 aa	Known RBP	32.04	■■■□□ 2.72
NECAB3-212	ENST00000485976	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	32.03	■■■□□ 2.72
NECAB3-212	ENST00000485976	ACE	P12821	1306 aa		32.02	■■■□□ 2.72
NECAB3-212	ENST00000485976	PPIP5K1	Q6PFW1	1433 aa		32.02	■■■□□ 2.72
NECAB3-212	ENST00000485976	RBM6	P78332	1123 aa	Known RBP	32.02	■■■□□ 2.72

Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms