RNA–Protein interactions for RNA: ENST00000485023.1

DDR1-246, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-246ENST00000485023 PRAM1Q96QH2 718 aa23.43■■□□□ 1.34
DDR1-246ENST00000485023 PHLPP1O60346 1717 aa23.42■■□□□ 1.34
DDR1-246ENST00000485023 BRINP3Q76B58 766 aa23.42■■□□□ 1.34
DDR1-246ENST00000485023 CDC42BPGQ6DT37 1551 aa23.42■■□□□ 1.34
DDR1-246ENST00000485023 DLC1Q96QB1 1528 aa23.4■■□□□ 1.34
DDR1-246ENST00000485023 POGKQ9P215 609 aa23.4■■□□□ 1.34
DDR1-246ENST00000485023 C1orf167Q5SNV9 1468 aa23.4■■□□□ 1.34
DDR1-246ENST00000485023 NUTM2FA1L443 756 aa23.39■■□□□ 1.33
DDR1-246ENST00000485023 KIAA1210Q9ULL0 1709 aa23.37■■□□□ 1.33
DDR1-246ENST00000485023 NBPF1Q3BBV0 1214 aa23.37■■□□□ 1.33
DDR1-246ENST00000485023 SIRT1Q96EB6 747 aa23.37■■□□□ 1.33
DDR1-246ENST00000485023 AHDC1Q5TGY3 1603 aaPredicted RBP23.37■■□□□ 1.33
DDR1-246ENST00000485023 COL16A1Q07092 1604 aaPredicted RBP23.36■■□□□ 1.33
DDR1-246ENST00000485023 TONSLQ96HA7 1378 aa23.36■■□□□ 1.33
DDR1-246ENST00000485023 DDX17Q92841 729 aaKnown RBP23.35■■□□□ 1.33
DDR1-246ENST00000485023 ORAI2Q96SN7 254 aa23.35■■□□□ 1.33
DDR1-246ENST00000485023 MED1Q15648 1581 aaPredicted RBP23.34■■□□□ 1.33
DDR1-246ENST00000485023 ARHGEF28Q8N1W1 1705 aaKnown RBP23.33■■□□□ 1.33
DDR1-246ENST00000485023 HIRIP3Q9BW71 556 aaPredicted RBP23.33■■□□□ 1.33
DDR1-246ENST00000485023 FMN2Q9NZ56 1722 aa23.33■■□□□ 1.32
DDR1-246ENST00000485023 MINK1Q8N4C8 1332 aaPredicted RBP23.33■■□□□ 1.32
DDR1-246ENST00000485023 NHSL1Q5SYE7 1610 aa23.32■■□□□ 1.32
DDR1-246ENST00000485023 ESCO1Q5FWF5 840 aa23.31■■□□□ 1.32
DDR1-246ENST00000485023 TRPM1Q7Z4N2 1603 aa23.3■■□□□ 1.32
DDR1-246ENST00000485023 ADGRB2O60241 1585 aa23.28■■□□□ 1.32
DDR1-246ENST00000485023 JCADQ9P266 1359 aa23.27■■□□□ 1.32
DDR1-246ENST00000485023 NBPF8Q3BBV2 869 aa23.27■■□□□ 1.32
DDR1-246ENST00000485023 ROCK2O75116 1388 aaKnown RBP23.26■■□□□ 1.31
DDR1-246ENST00000485023 XPCQ01831 940 aaPredicted RBP23.22■■□□□ 1.31
DDR1-246ENST00000485023 USP32Q8NFA0 1604 aa23.22■■□□□ 1.31
DDR1-246ENST00000485023 PHF23Q9BUL5 403 aaPredicted RBP23.21■■□□□ 1.31
DDR1-246ENST00000485023 RGPD8O14715 1765 aaPredicted RBP23.21■■□□□ 1.31
DDR1-246ENST00000485023 SHPRHQ149N8 1683 aa23.2■■□□□ 1.3
DDR1-246ENST00000485023 FOXO3O43524 673 aa23.2■■□□□ 1.3
DDR1-246ENST00000485023 WASLO00401 505 aaPredicted RBP23.19■■□□□ 1.3
DDR1-246ENST00000485023 CCER1Q8TC90 406 aaPredicted RBP23.19■■□□□ 1.3
DDR1-246ENST00000485023 KIF1AQ12756 1690 aa23.19■■□□□ 1.3
DDR1-246ENST00000485023 TULP4Q9NRJ4 1543 aa23.18■■□□□ 1.3
DDR1-246ENST00000485023 NPHP3Q7Z494 1330 aa23.18■■□□□ 1.3
DDR1-246ENST00000485023 CENPJQ9HC77 1338 aaPredicted RBP23.18■■□□□ 1.3
DDR1-246ENST00000485023 LRRC59Q96AG4 307 aaKnown RBP23.18■■□□□ 1.3
DDR1-246ENST00000485023 ANKARQ7Z5J8 1434 aa23.17■■□□□ 1.3
DDR1-246ENST00000485023 SOS2Q07890 1332 aaPredicted RBP23.17■■□□□ 1.3
DDR1-246ENST00000485023 PRR36Q9H6K5 1346 aa23.17■■□□□ 1.3
DDR1-246ENST00000485023 QRICH2Q9H0J4 1663 aa23.17■■□□□ 1.3
DDR1-246ENST00000485023 PHF8Q9UPP1 1060 aa23.17■■□□□ 1.3
DDR1-246ENST00000485023 LRP6O75581 1613 aa23.17■■□□□ 1.3
DDR1-246ENST00000485023 PXDNQ92626 1479 aa23.17■■□□□ 1.3
DDR1-246ENST00000485023 EIF3AQ14152 1382 aaKnown RBP23.16■■□□□ 1.3
DDR1-246ENST00000485023 NUTM2BA6NNL0 878 aaPredicted RBP23.16■■□□□ 1.3
DDR1-246ENST00000485023 NUTM2EB1AL46 878 aaPredicted RBP23.16■■□□□ 1.3
DDR1-246ENST00000485023 NUTM2AQ8IVF1 878 aaPredicted RBP23.16■■□□□ 1.3
DDR1-246ENST00000485023 RALGAPBQ86X10 1494 aa23.16■■□□□ 1.3
DDR1-246ENST00000485023 PNPLA6Q8IY17 1366 aa23.15■■□□□ 1.3
DDR1-246ENST00000485023 PMFBP1Q8TBY8 1022 aa23.15■■□□□ 1.3
DDR1-246ENST00000485023 SPATA31A6Q5VVP1 1343 aa23.14■■□□□ 1.3
DDR1-246ENST00000485023 CDK19Q9BWU1 502 aa23.13■■□□□ 1.29
DDR1-246ENST00000485023 CARD11Q9BXL7 1154 aa23.13■■□□□ 1.29
DDR1-246ENST00000485023 GPRASP1Q5JY77 1395 aa23.13■■□□□ 1.29
DDR1-246ENST00000485023 ATP7BP35670 1465 aa23.12■■□□□ 1.29
DDR1-246ENST00000485023 CLSPNQ9HAW4 1339 aa23.11■■□□□ 1.29
DDR1-246ENST00000485023 MEX3CQ5U5Q3 659 aaKnown RBP23.11■■□□□ 1.29
DDR1-246ENST00000485023 SRPK2P78362 688 aaKnown RBP23.09■■□□□ 1.29
DDR1-246ENST00000485023 KRT28Q7Z3Y7 464 aa23.09■■□□□ 1.29
DDR1-246ENST00000485023 NUDT16Q96DE0 195 aaKnown RBP23.09■■□□□ 1.29
DDR1-246ENST00000485023 CABP2Q9NPB3 220 aa23.07■■□□□ 1.28
DDR1-246ENST00000485023 ITSN1Q15811 1721 aa23.07■■□□□ 1.28
DDR1-246ENST00000485023 PSME1Q06323 249 aa23.06■■□□□ 1.28
DDR1-246ENST00000485023 PLEKHG5O94827 1062 aa23.05■■□□□ 1.28
DDR1-246ENST00000485023 NGDNQ8NEJ9 315 aaKnown RBP23.05■■□□□ 1.28
DDR1-246ENST00000485023 TOPAZ1Q8N9V7 1692 aa23.05■■□□□ 1.28
DDR1-246ENST00000485023 RGS17Q9UGC6 210 aaPredicted RBP23.04■■□□□ 1.28
DDR1-246ENST00000485023 TNS3Q68CZ2 1445 aa23.03■■□□□ 1.28
DDR1-246ENST00000485023 ADAMTS2O95450 1211 aa23.03■■□□□ 1.28
DDR1-246ENST00000485023 LMOD2Q6P5Q4 547 aa23.03■■□□□ 1.28
DDR1-246ENST00000485023 COL22A1Q8NFW1 1626 aaPredicted RBP23.03■■□□□ 1.28
DDR1-246ENST00000485023 SPATA31A3Q5VYP0 1347 aa23.03■■□□□ 1.28
DDR1-246ENST00000485023 PPIP5K1Q6PFW1 1433 aa23■■□□□ 1.27
DDR1-246ENST00000485023 CCDC61Q9Y6R9 512 aa23■■□□□ 1.27
DDR1-246ENST00000485023 EVC2Q86UK5 1308 aa23■■□□□ 1.27
DDR1-246ENST00000485023 C8orf37Q96NL8 207 aa22.99■■□□□ 1.27
DDR1-246ENST00000485023 SBNO1A3KN83 1393 aa22.99■■□□□ 1.27
DDR1-246ENST00000485023 TRPM3Q9HCF6 1732 aaPredicted RBP22.99■■□□□ 1.27
DDR1-246ENST00000485023 TIMELESSQ9UNS1 1208 aa22.98■■□□□ 1.27
DDR1-246ENST00000485023 PAK3O75914 559 aaPredicted RBP22.97■■□□□ 1.27
DDR1-246ENST00000485023 ACEP12821 1306 aa22.97■■□□□ 1.27
DDR1-246ENST00000485023 POTEAQ6S8J7 498 aa22.95■■□□□ 1.26
DDR1-246ENST00000485023 CABLES1Q8TDN4 633 aa22.95■■□□□ 1.26
DDR1-246ENST00000485023 AFF2P51816 1311 aa22.94■■□□□ 1.26
DDR1-246ENST00000485023 HAP1P54257 671 aaPredicted RBP22.94■■□□□ 1.26
DDR1-246ENST00000485023 POLR3AO14802 1390 aaPredicted RBP22.93■■□□□ 1.26
DDR1-246ENST00000485023 ARHGEF10O15013 1369 aa22.93■■□□□ 1.26
DDR1-246ENST00000485023 USP47Q96K76 1375 aa22.93■■□□□ 1.26
DDR1-246ENST00000485023 SBNO2Q9Y2G9 1366 aa22.93■■□□□ 1.26
DDR1-246ENST00000485023 CABP1Q9NZU7 370 aa22.93■■□□□ 1.26
DDR1-246ENST00000485023 ST20-MTHFSA0A0A6YYL1 179 aa22.92■■□□□ 1.26
DDR1-246ENST00000485023 PLEKHG3A1L390 1219 aa22.92■■□□□ 1.26
DDR1-246ENST00000485023 NGLY1Q96IV0 654 aa22.92■■□□□ 1.26
DDR1-246ENST00000485023 ALS2Q96Q42 1657 aa22.92■■□□□ 1.26
DDR1-246ENST00000485023 ABCA3Q99758 1704 aa22.9■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms