RNA–Protein interactions for RNA: ENST00000484546.1

CDK5RAP2-217, Transcript of CDK5 regulatory subunit associated protein 2, humanhuman

TSL 1 (best)

Gene CDK5RAP2, Length 1,269 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2-217ENST00000484546 COL16A1Q07092 1604 aaPredicted RBP16.86■□□□□ 0.29
CDK5RAP2-217ENST00000484546 WAPLQ7Z5K2 1190 aa16.86■□□□□ 0.29
CDK5RAP2-217ENST00000484546 L3MBTL2Q969R5 705 aa16.85■□□□□ 0.29
CDK5RAP2-217ENST00000484546 C1orf167Q5SNV9 1468 aa16.85■□□□□ 0.29
CDK5RAP2-217ENST00000484546 NHSL1Q5SYE7 1610 aa16.85■□□□□ 0.29
CDK5RAP2-217ENST00000484546 BRINP3Q76B58 766 aa16.84■□□□□ 0.29
CDK5RAP2-217ENST00000484546 SIRT1Q96EB6 747 aa16.84■□□□□ 0.29
CDK5RAP2-217ENST00000484546 MED1Q15648 1581 aaPredicted RBP16.84■□□□□ 0.29
CDK5RAP2-217ENST00000484546 ARHGEF28Q8N1W1 1705 aaKnown RBP16.84■□□□□ 0.29
CDK5RAP2-217ENST00000484546 FMN2Q9NZ56 1722 aa16.83■□□□□ 0.28
CDK5RAP2-217ENST00000484546 ADGRB2O60241 1585 aa16.82■□□□□ 0.28
CDK5RAP2-217ENST00000484546 POGKQ9P215 609 aa16.82■□□□□ 0.28
CDK5RAP2-217ENST00000484546 CCER1Q8TC90 406 aaPredicted RBP16.81■□□□□ 0.28
CDK5RAP2-217ENST00000484546 PRAM1Q96QH2 718 aa16.81■□□□□ 0.28
CDK5RAP2-217ENST00000484546 TRAK1Q9UPV9 953 aa16.8■□□□□ 0.28
CDK5RAP2-217ENST00000484546 TRPM1Q7Z4N2 1603 aa16.79■□□□□ 0.28
CDK5RAP2-217ENST00000484546 DISP3Q9P2K9 1392 aa16.77■□□□□ 0.28
CDK5RAP2-217ENST00000484546 CLSPNQ9HAW4 1339 aa16.77■□□□□ 0.28
CDK5RAP2-217ENST00000484546 SAFB2Q14151 953 aaKnown RBP eCLIP16.77■□□□□ 0.28
CDK5RAP2-217ENST00000484546 JCADQ9P266 1359 aa16.77■□□□□ 0.27
CDK5RAP2-217ENST00000484546 SHPRHQ149N8 1683 aa16.76■□□□□ 0.27
CDK5RAP2-217ENST00000484546 NBPF1Q3BBV0 1214 aa16.75■□□□□ 0.27
CDK5RAP2-217ENST00000484546 ORAI2Q96SN7 254 aa16.75■□□□□ 0.27
CDK5RAP2-217ENST00000484546 KIF1AQ12756 1690 aa16.75■□□□□ 0.27
CDK5RAP2-217ENST00000484546 ROCK2O75116 1388 aaKnown RBP16.74■□□□□ 0.27
CDK5RAP2-217ENST00000484546 USP32Q8NFA0 1604 aa16.74■□□□□ 0.27
CDK5RAP2-217ENST00000484546 NUTM2FA1L443 756 aa16.73■□□□□ 0.27
CDK5RAP2-217ENST00000484546 DDX17Q92841 729 aaKnown RBP16.73■□□□□ 0.27
CDK5RAP2-217ENST00000484546 RGPD8O14715 1765 aaPredicted RBP16.73■□□□□ 0.27
CDK5RAP2-217ENST00000484546 MINK1Q8N4C8 1332 aaPredicted RBP16.71■□□□□ 0.27
CDK5RAP2-217ENST00000484546 ANKARQ7Z5J8 1434 aa16.71■□□□□ 0.27
CDK5RAP2-217ENST00000484546 TULP4Q9NRJ4 1543 aa16.71■□□□□ 0.27
CDK5RAP2-217ENST00000484546 ESCO1Q5FWF5 840 aa16.71■□□□□ 0.27
CDK5RAP2-217ENST00000484546 PXDNQ92626 1479 aa16.7■□□□□ 0.26
CDK5RAP2-217ENST00000484546 HIRIP3Q9BW71 556 aaPredicted RBP16.7■□□□□ 0.26
CDK5RAP2-217ENST00000484546 QRICH2Q9H0J4 1663 aa16.69■□□□□ 0.26
CDK5RAP2-217ENST00000484546 EIF3AQ14152 1382 aaKnown RBP16.69■□□□□ 0.26
CDK5RAP2-217ENST00000484546 NBPF8Q3BBV2 869 aa16.69■□□□□ 0.26
CDK5RAP2-217ENST00000484546 LRP6O75581 1613 aa16.69■□□□□ 0.26
CDK5RAP2-217ENST00000484546 SOS2Q07890 1332 aaPredicted RBP16.69■□□□□ 0.26
CDK5RAP2-217ENST00000484546 RALGAPBQ86X10 1494 aa16.68■□□□□ 0.26
CDK5RAP2-217ENST00000484546 GPRASP1Q5JY77 1395 aa16.68■□□□□ 0.26
CDK5RAP2-217ENST00000484546 NPHP3Q7Z494 1330 aa16.68■□□□□ 0.26
CDK5RAP2-217ENST00000484546 PNPLA6Q8IY17 1366 aa16.67■□□□□ 0.26
CDK5RAP2-217ENST00000484546 SPATA31A6Q5VVP1 1343 aa16.67■□□□□ 0.26
CDK5RAP2-217ENST00000484546 WASLO00401 505 aaPredicted RBP16.66■□□□□ 0.26
CDK5RAP2-217ENST00000484546 LRRC59Q96AG4 307 aaKnown RBP16.66■□□□□ 0.26
CDK5RAP2-217ENST00000484546 CARD11Q9BXL7 1154 aa16.66■□□□□ 0.26
CDK5RAP2-217ENST00000484546 TIMELESSQ9UNS1 1208 aa16.66■□□□□ 0.26
CDK5RAP2-217ENST00000484546 ATP7BP35670 1465 aa16.66■□□□□ 0.26
CDK5RAP2-217ENST00000484546 CENPJQ9HC77 1338 aaPredicted RBP16.66■□□□□ 0.26
CDK5RAP2-217ENST00000484546 ITSN1Q15811 1721 aa16.65■□□□□ 0.26
CDK5RAP2-217ENST00000484546 COL22A1Q8NFW1 1626 aaPredicted RBP16.65■□□□□ 0.26
CDK5RAP2-217ENST00000484546 TOPAZ1Q8N9V7 1692 aa16.65■□□□□ 0.26
CDK5RAP2-217ENST00000484546 PRR36Q9H6K5 1346 aa16.65■□□□□ 0.26
CDK5RAP2-217ENST00000484546 FOXO3O43524 673 aa16.64■□□□□ 0.25
CDK5RAP2-217ENST00000484546 PHF8Q9UPP1 1060 aa16.64■□□□□ 0.25
CDK5RAP2-217ENST00000484546 XPCQ01831 940 aaPredicted RBP16.63■□□□□ 0.25
CDK5RAP2-217ENST00000484546 TRPM3Q9HCF6 1732 aaPredicted RBP16.59■□□□□ 0.25
CDK5RAP2-217ENST00000484546 SRPK2P78362 688 aaKnown RBP16.59■□□□□ 0.25
CDK5RAP2-217ENST00000484546 ILDR2Q71H61 639 aa16.59■□□□□ 0.25
CDK5RAP2-217ENST00000484546 PMFBP1Q8TBY8 1022 aa16.59■□□□□ 0.25
CDK5RAP2-217ENST00000484546 CDK19Q9BWU1 502 aa16.59■□□□□ 0.25
CDK5RAP2-217ENST00000484546 NUTM2BA6NNL0 878 aaPredicted RBP16.58■□□□□ 0.24
CDK5RAP2-217ENST00000484546 NUTM2EB1AL46 878 aaPredicted RBP16.58■□□□□ 0.24
CDK5RAP2-217ENST00000484546 NUTM2AQ8IVF1 878 aaPredicted RBP16.58■□□□□ 0.24
CDK5RAP2-217ENST00000484546 NUDT16Q96DE0 195 aaKnown RBP16.58■□□□□ 0.24
CDK5RAP2-217ENST00000484546 TNS3Q68CZ2 1445 aa16.58■□□□□ 0.24
CDK5RAP2-217ENST00000484546 MEX3CQ5U5Q3 659 aaKnown RBP16.57■□□□□ 0.24
CDK5RAP2-217ENST00000484546 KRT28Q7Z3Y7 464 aa16.57■□□□□ 0.24
CDK5RAP2-217ENST00000484546 RGS17Q9UGC6 210 aaPredicted RBP16.57■□□□□ 0.24
CDK5RAP2-217ENST00000484546 SBNO1A3KN83 1393 aa16.56■□□□□ 0.24
CDK5RAP2-217ENST00000484546 SPATA31A3Q5VYP0 1347 aa16.56■□□□□ 0.24
CDK5RAP2-217ENST00000484546 EVC2Q86UK5 1308 aa16.56■□□□□ 0.24
CDK5RAP2-217ENST00000484546 ALS2Q96Q42 1657 aa16.55■□□□□ 0.24
CDK5RAP2-217ENST00000484546 SBNO2Q9Y2G9 1366 aa16.54■□□□□ 0.24
CDK5RAP2-217ENST00000484546 ABCA3Q99758 1704 aa16.54■□□□□ 0.24
CDK5RAP2-217ENST00000484546 PSME1Q06323 249 aa16.54■□□□□ 0.24
CDK5RAP2-217ENST00000484546 NGDNQ8NEJ9 315 aaKnown RBP16.54■□□□□ 0.24
CDK5RAP2-217ENST00000484546 CABP2Q9NPB3 220 aa16.53■□□□□ 0.24
CDK5RAP2-217ENST00000484546 MARF1Q9Y4F3 1742 aaKnown RBP16.53■□□□□ 0.24
CDK5RAP2-217ENST00000484546 PPIP5K1Q6PFW1 1433 aa16.53■□□□□ 0.24
CDK5RAP2-217ENST00000484546 POLR3AO14802 1390 aaPredicted RBP16.52■□□□□ 0.24
CDK5RAP2-217ENST00000484546 CCDC61Q9Y6R9 512 aa16.52■□□□□ 0.24
CDK5RAP2-217ENST00000484546 ARHGEF10O15013 1369 aa16.51■□□□□ 0.23
CDK5RAP2-217ENST00000484546 PLEKHG3A1L390 1219 aa16.5■□□□□ 0.23
CDK5RAP2-217ENST00000484546 ADAMTS2O95450 1211 aa16.5■□□□□ 0.23
CDK5RAP2-217ENST00000484546 LMOD2Q6P5Q4 547 aa16.5■□□□□ 0.23
CDK5RAP2-217ENST00000484546 USP47Q96K76 1375 aa16.5■□□□□ 0.23
CDK5RAP2-217ENST00000484546 ACEP12821 1306 aa16.49■□□□□ 0.23
CDK5RAP2-217ENST00000484546 SLC24A1O60721 1099 aa16.49■□□□□ 0.23
CDK5RAP2-217ENST00000484546 POTEAQ6S8J7 498 aa16.49■□□□□ 0.23
CDK5RAP2-217ENST00000484546 C8orf37Q96NL8 207 aa16.49■□□□□ 0.23
CDK5RAP2-217ENST00000484546 CRYBG1Q9Y4K1 1723 aa16.49■□□□□ 0.23
CDK5RAP2-217ENST00000484546 AFF2P51816 1311 aa16.48■□□□□ 0.23
CDK5RAP2-217ENST00000484546 HAP1P54257 671 aaPredicted RBP16.48■□□□□ 0.23
CDK5RAP2-217ENST00000484546 ST20-MTHFSA0A0A6YYL1 179 aa16.47■□□□□ 0.23
CDK5RAP2-217ENST00000484546 PAK3O75914 559 aaPredicted RBP16.47■□□□□ 0.23
CDK5RAP2-217ENST00000484546 ATAD2Q6PL18 1390 aa16.47■□□□□ 0.23
CDK5RAP2-217ENST00000484546 ZNF772Q68DY9 489 aaPredicted RBP16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms