RNA–Protein interactions for RNA: ENST00000482424.1

CLIP2-205, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 5

Gene CLIP2, Length 971 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-205ENST00000482424 DLC1Q96QB1 1528 aa29.12■■■□□ 2.25
CLIP2-205ENST00000482424 NHSL1Q5SYE7 1610 aa29.12■■■□□ 2.25
CLIP2-205ENST00000482424 JCADQ9P266 1359 aa29.12■■■□□ 2.25
CLIP2-205ENST00000482424 ORAI2Q96SN7 254 aa29.07■■■□□ 2.24
CLIP2-205ENST00000482424 SIN3AQ96ST3 1273 aa29.06■■■□□ 2.24
CLIP2-205ENST00000482424 ILDR2Q71H61 639 aa29.05■■■□□ 2.24
CLIP2-205ENST00000482424 PRAM1Q96QH2 718 aa29.05■■■□□ 2.24
CLIP2-205ENST00000482424 KIAA1210Q9ULL0 1709 aa29.04■■■□□ 2.24
CLIP2-205ENST00000482424 TRAK1Q9UPV9 953 aa29.03■■■□□ 2.24
CLIP2-205ENST00000482424 SHPRHQ149N8 1683 aa29.02■■■□□ 2.24
CLIP2-205ENST00000482424 DDX17Q92841 729 aaKnown RBP29.02■■■□□ 2.24
CLIP2-205ENST00000482424 FMN2Q9NZ56 1722 aa29.02■■■□□ 2.24
CLIP2-205ENST00000482424 L3MBTL2Q969R5 705 aa29.01■■■□□ 2.23
CLIP2-205ENST00000482424 SPATA31A6Q5VVP1 1343 aa29■■■□□ 2.23
CLIP2-205ENST00000482424 POGKQ9P215 609 aa29■■■□□ 2.23
CLIP2-205ENST00000482424 LRRC59Q96AG4 307 aaKnown RBP28.99■■■□□ 2.23
CLIP2-205ENST00000482424 PHF23Q9BUL5 403 aaPredicted RBP28.98■■■□□ 2.23
CLIP2-205ENST00000482424 SOS2Q07890 1332 aaPredicted RBP28.97■■■□□ 2.23
CLIP2-205ENST00000482424 SAFB2Q14151 953 aaKnown RBP eCLIP28.97■■■□□ 2.23
CLIP2-205ENST00000482424 ESCO1Q5FWF5 840 aa28.97■■■□□ 2.23
CLIP2-205ENST00000482424 NEUROD1Q13562 356 aa28.96■■■□□ 2.23
CLIP2-205ENST00000482424 ADGRB2O60241 1585 aa28.96■■■□□ 2.23
CLIP2-205ENST00000482424 NUTM2FA1L443 756 aa28.94■■■□□ 2.22
CLIP2-205ENST00000482424 RGS17Q9UGC6 210 aaPredicted RBP28.94■■■□□ 2.22
CLIP2-205ENST00000482424 ARHGEF28Q8N1W1 1705 aaKnown RBP28.94■■■□□ 2.22
CLIP2-205ENST00000482424 NBPF1Q3BBV0 1214 aa28.93■■■□□ 2.22
CLIP2-205ENST00000482424 NPHP3Q7Z494 1330 aa28.91■■■□□ 2.22
CLIP2-205ENST00000482424 LRP6O75581 1613 aa28.91■■■□□ 2.22
CLIP2-205ENST00000482424 PNPLA6Q8IY17 1366 aa28.89■■■□□ 2.22
CLIP2-205ENST00000482424 RGPD8O14715 1765 aaPredicted RBP28.89■■■□□ 2.22
CLIP2-205ENST00000482424 FOXO3O43524 673 aa28.88■■■□□ 2.21
CLIP2-205ENST00000482424 ANKARQ7Z5J8 1434 aa28.87■■■□□ 2.21
CLIP2-205ENST00000482424 KIF1AQ12756 1690 aa28.87■■■□□ 2.21
CLIP2-205ENST00000482424 PXDNQ92626 1479 aa28.87■■■□□ 2.21
CLIP2-205ENST00000482424 MINK1Q8N4C8 1332 aaPredicted RBP28.87■■■□□ 2.21
CLIP2-205ENST00000482424 USP32Q8NFA0 1604 aa28.85■■■□□ 2.21
CLIP2-205ENST00000482424 HIRIP3Q9BW71 556 aaPredicted RBP28.85■■■□□ 2.21
CLIP2-205ENST00000482424 WASLO00401 505 aaPredicted RBP28.84■■■□□ 2.21
CLIP2-205ENST00000482424 PHF8Q9UPP1 1060 aa28.83■■■□□ 2.21
CLIP2-205ENST00000482424 TRPM1Q7Z4N2 1603 aa28.83■■■□□ 2.21
CLIP2-205ENST00000482424 EIF3AQ14152 1382 aaKnown RBP28.81■■■□□ 2.2
CLIP2-205ENST00000482424 TULP4Q9NRJ4 1543 aa28.8■■■□□ 2.2
CLIP2-205ENST00000482424 NUTM2BA6NNL0 878 aaPredicted RBP28.79■■■□□ 2.2
CLIP2-205ENST00000482424 NUTM2EB1AL46 878 aaPredicted RBP28.79■■■□□ 2.2
CLIP2-205ENST00000482424 NUTM2AQ8IVF1 878 aaPredicted RBP28.79■■■□□ 2.2
CLIP2-205ENST00000482424 COL22A1Q8NFW1 1626 aaPredicted RBP28.79■■■□□ 2.2
CLIP2-205ENST00000482424 PRR36Q9H6K5 1346 aa28.78■■■□□ 2.2
CLIP2-205ENST00000482424 XPCQ01831 940 aaPredicted RBP28.78■■■□□ 2.2
CLIP2-205ENST00000482424 SOCS7O14512 581 aa28.77■■■□□ 2.2
CLIP2-205ENST00000482424 MEX3CQ5U5Q3 659 aaKnown RBP28.77■■■□□ 2.2
CLIP2-205ENST00000482424 NBPF8Q3BBV2 869 aa28.76■■■□□ 2.19
CLIP2-205ENST00000482424 POTEAQ6S8J7 498 aa28.76■■■□□ 2.19
CLIP2-205ENST00000482424 KRT28Q7Z3Y7 464 aa28.76■■■□□ 2.19
CLIP2-205ENST00000482424 TONSLQ96HA7 1378 aa28.74■■■□□ 2.19
CLIP2-205ENST00000482424 SPATA31A3Q5VYP0 1347 aa28.73■■■□□ 2.19
CLIP2-205ENST00000482424 CENPJQ9HC77 1338 aaPredicted RBP28.72■■■□□ 2.19
CLIP2-205ENST00000482424 PMFBP1Q8TBY8 1022 aa28.72■■■□□ 2.19
CLIP2-205ENST00000482424 PSME1Q06323 249 aa28.71■■■□□ 2.19
CLIP2-205ENST00000482424 CDK19Q9BWU1 502 aa28.71■■■□□ 2.19
CLIP2-205ENST00000482424 ROCK2O75116 1388 aaKnown RBP28.71■■■□□ 2.19
CLIP2-205ENST00000482424 ATP7BP35670 1465 aa28.71■■■□□ 2.19
CLIP2-205ENST00000482424 GPRASP1Q5JY77 1395 aa28.7■■■□□ 2.18
CLIP2-205ENST00000482424 ZNF772Q68DY9 489 aaPredicted RBP28.69■■■□□ 2.18
CLIP2-205ENST00000482424 NUDT16Q96DE0 195 aaKnown RBP28.69■■■□□ 2.18
CLIP2-205ENST00000482424 SBNO1A3KN83 1393 aa28.69■■■□□ 2.18
CLIP2-205ENST00000482424 PCGF6Q9BYE7 350 aa28.68■■■□□ 2.18
CLIP2-205ENST00000482424 ITSN1Q15811 1721 aa28.66■■■□□ 2.18
CLIP2-205ENST00000482424 QRICH2Q9H0J4 1663 aa28.66■■■□□ 2.18
CLIP2-205ENST00000482424 TNS3Q68CZ2 1445 aa28.66■■■□□ 2.18
CLIP2-205ENST00000482424 ADAMTS2O95450 1211 aa28.64■■■□□ 2.18
CLIP2-205ENST00000482424 C8orf37Q96NL8 207 aa28.64■■■□□ 2.18
CLIP2-205ENST00000482424 AFF2P51816 1311 aa28.64■■■□□ 2.17
CLIP2-205ENST00000482424 CCDC61Q9Y6R9 512 aa28.63■■■□□ 2.17
CLIP2-205ENST00000482424 TOPAZ1Q8N9V7 1692 aa28.62■■■□□ 2.17
CLIP2-205ENST00000482424 RALGAPBQ86X10 1494 aa28.62■■■□□ 2.17
CLIP2-205ENST00000482424 TRPM3Q9HCF6 1732 aaPredicted RBP28.62■■■□□ 2.17
CLIP2-205ENST00000482424 NGDNQ8NEJ9 315 aaKnown RBP28.6■■■□□ 2.17
CLIP2-205ENST00000482424 CLSPNQ9HAW4 1339 aa28.6■■■□□ 2.17
CLIP2-205ENST00000482424 ARHGEF10O15013 1369 aa28.6■■■□□ 2.17
CLIP2-205ENST00000482424 PLEKHG3A1L390 1219 aa28.59■■■□□ 2.17
CLIP2-205ENST00000482424 NGLY1Q96IV0 654 aa28.59■■■□□ 2.17
CLIP2-205ENST00000482424 MARF1Q9Y4F3 1742 aaKnown RBP28.58■■■□□ 2.17
CLIP2-205ENST00000482424 POLR3AO14802 1390 aaPredicted RBP28.58■■■□□ 2.17
CLIP2-205ENST00000482424 FNBP4Q8N3X1 1017 aaPredicted RBP28.57■■■□□ 2.16
CLIP2-205ENST00000482424 CARD11Q9BXL7 1154 aa28.57■■■□□ 2.16
CLIP2-205ENST00000482424 SRPK2P78362 688 aaKnown RBP28.56■■■□□ 2.16
CLIP2-205ENST00000482424 ALS2Q96Q42 1657 aa28.56■■■□□ 2.16
CLIP2-205ENST00000482424 CABP2Q9NPB3 220 aa28.55■■■□□ 2.16
CLIP2-205ENST00000482424 ACEP12821 1306 aa28.53■■■□□ 2.16
CLIP2-205ENST00000482424 EVC2Q86UK5 1308 aa28.53■■■□□ 2.16
CLIP2-205ENST00000482424 SBNO2Q9Y2G9 1366 aa28.52■■■□□ 2.16
CLIP2-205ENST00000482424 LMOD2Q6P5Q4 547 aa28.51■■■□□ 2.15
CLIP2-205ENST00000482424 TIMELESSQ9UNS1 1208 aa28.51■■■□□ 2.15
CLIP2-205ENST00000482424 ABCA3Q99758 1704 aa28.5■■■□□ 2.15
CLIP2-205ENST00000482424 RXRBP28702 533 aa28.5■■■□□ 2.15
CLIP2-205ENST00000482424 CABLES1Q8TDN4 633 aa28.5■■■□□ 2.15
CLIP2-205ENST00000482424 QTRT2Q9H974 415 aaKnown RBP28.5■■■□□ 2.15
CLIP2-205ENST00000482424 USP21Q9UK80 565 aa28.5■■■□□ 2.15
CLIP2-205ENST00000482424 PPIP5K1Q6PFW1 1433 aa28.5■■■□□ 2.15
CLIP2-205ENST00000482424 BCL9LQ86UU0 1499 aa28.46■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms