RNA–Protein interactions for RNA: ENST00000481738.1

LINC00544-202, long intergenic non-protein coding RNA 544, humanhuman

TSL 3 BASIC

Gene LINC00544, Length 575 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00544-202ENST00000481738 DDX17Q92841 729 aaKnown RBP13.09□□□□□ -0.31
LINC00544-202ENST00000481738 STAC3Q96MF2 364 aa13.09□□□□□ -0.31
LINC00544-202ENST00000481738 ORAI2Q96SN7 254 aa13.09□□□□□ -0.31
LINC00544-202ENST00000481738 SIRT1Q96EB6 747 aa13.08□□□□□ -0.32
LINC00544-202ENST00000481738 ADGRB1O14514 1584 aa13.07□□□□□ -0.32
LINC00544-202ENST00000481738 NUTM2FA1L443 756 aa13.07□□□□□ -0.32
LINC00544-202ENST00000481738 SAFB2Q14151 953 aaKnown RBP eCLIP13.06□□□□□ -0.32
LINC00544-202ENST00000481738 PRAM1Q96QH2 718 aa13.06□□□□□ -0.32
LINC00544-202ENST00000481738 SHPRHQ149N8 1683 aa13.05□□□□□ -0.32
LINC00544-202ENST00000481738 DLC1Q96QB1 1528 aa13.05□□□□□ -0.32
LINC00544-202ENST00000481738 TRIM26Q12899 539 aaPredicted RBP13.05□□□□□ -0.32
LINC00544-202ENST00000481738 ESCO1Q5FWF5 840 aa13.05□□□□□ -0.32
LINC00544-202ENST00000481738 POGKQ9P215 609 aa13.05□□□□□ -0.32
LINC00544-202ENST00000481738 TRAK1Q9UPV9 953 aa13.05□□□□□ -0.32
LINC00544-202ENST00000481738 SPATA31A6Q5VVP1 1343 aa13.05□□□□□ -0.32
LINC00544-202ENST00000481738 LRRC59Q96AG4 307 aaKnown RBP13.04□□□□□ -0.32
LINC00544-202ENST00000481738 SIN3AQ96ST3 1273 aa13.04□□□□□ -0.32
LINC00544-202ENST00000481738 RGS17Q9UGC6 210 aaPredicted RBP13.04□□□□□ -0.32
LINC00544-202ENST00000481738 FMN2Q9NZ56 1722 aa13.04□□□□□ -0.32
LINC00544-202ENST00000481738 LRP6O75581 1613 aa13.03□□□□□ -0.32
LINC00544-202ENST00000481738 NUTM2BA6NNL0 878 aaPredicted RBP13.02□□□□□ -0.33
LINC00544-202ENST00000481738 NUTM2EB1AL46 878 aaPredicted RBP13.02□□□□□ -0.33
LINC00544-202ENST00000481738 NUTM2AQ8IVF1 878 aaPredicted RBP13.02□□□□□ -0.33
LINC00544-202ENST00000481738 SOS2Q07890 1332 aaPredicted RBP13.02□□□□□ -0.33
LINC00544-202ENST00000481738 SOCS7O14512 581 aa13.01□□□□□ -0.33
LINC00544-202ENST00000481738 NEUROD1Q13562 356 aa13.01□□□□□ -0.33
LINC00544-202ENST00000481738 MEX3CQ5U5Q3 659 aaKnown RBP13.01□□□□□ -0.33
LINC00544-202ENST00000481738 PNPLA6Q8IY17 1366 aa13.01□□□□□ -0.33
LINC00544-202ENST00000481738 NPHP3Q7Z494 1330 aa13□□□□□ -0.33
LINC00544-202ENST00000481738 MINK1Q8N4C8 1332 aaPredicted RBP13□□□□□ -0.33
LINC00544-202ENST00000481738 FOXO3O43524 673 aa13□□□□□ -0.33
LINC00544-202ENST00000481738 L3MBTL2Q969R5 705 aa13□□□□□ -0.33
LINC00544-202ENST00000481738 KIAA1210Q9ULL0 1709 aa12.99□□□□□ -0.33
LINC00544-202ENST00000481738 XPCQ01831 940 aaPredicted RBP12.99□□□□□ -0.33
LINC00544-202ENST00000481738 HIRIP3Q9BW71 556 aaPredicted RBP12.99□□□□□ -0.33
LINC00544-202ENST00000481738 RGPD8O14715 1765 aaPredicted RBP12.99□□□□□ -0.33
LINC00544-202ENST00000481738 ARHGEF28Q8N1W1 1705 aaKnown RBP12.99□□□□□ -0.33
LINC00544-202ENST00000481738 ADGRB2O60241 1585 aa12.98□□□□□ -0.33
LINC00544-202ENST00000481738 NBPF1Q3BBV0 1214 aa12.98□□□□□ -0.33
LINC00544-202ENST00000481738 POTEAQ6S8J7 498 aa12.98□□□□□ -0.33
LINC00544-202ENST00000481738 KIF1AQ12756 1690 aa12.98□□□□□ -0.33
LINC00544-202ENST00000481738 PXDNQ92626 1479 aa12.97□□□□□ -0.33
LINC00544-202ENST00000481738 PHF8Q9UPP1 1060 aa12.96□□□□□ -0.33
LINC00544-202ENST00000481738 ANKARQ7Z5J8 1434 aa12.96□□□□□ -0.34
LINC00544-202ENST00000481738 USP32Q8NFA0 1604 aa12.95□□□□□ -0.34
LINC00544-202ENST00000481738 WASLO00401 505 aaPredicted RBP12.95□□□□□ -0.34
LINC00544-202ENST00000481738 KRT28Q7Z3Y7 464 aa12.94□□□□□ -0.34
LINC00544-202ENST00000481738 PMFBP1Q8TBY8 1022 aa12.94□□□□□ -0.34
LINC00544-202ENST00000481738 EIF3AQ14152 1382 aaKnown RBP12.94□□□□□ -0.34
LINC00544-202ENST00000481738 PRR36Q9H6K5 1346 aa12.93□□□□□ -0.34
LINC00544-202ENST00000481738 COL22A1Q8NFW1 1626 aaPredicted RBP12.93□□□□□ -0.34
LINC00544-202ENST00000481738 ADAMTS2O95450 1211 aa12.93□□□□□ -0.34
LINC00544-202ENST00000481738 ZNF772Q68DY9 489 aaPredicted RBP12.93□□□□□ -0.34
LINC00544-202ENST00000481738 TULP4Q9NRJ4 1543 aa12.93□□□□□ -0.34
LINC00544-202ENST00000481738 AFF2P51816 1311 aa12.92□□□□□ -0.34
LINC00544-202ENST00000481738 C8orf37Q96NL8 207 aa12.92□□□□□ -0.34
LINC00544-202ENST00000481738 TRPM1Q7Z4N2 1603 aa12.91□□□□□ -0.34
LINC00544-202ENST00000481738 SPATA31A3Q5VYP0 1347 aa12.91□□□□□ -0.34
LINC00544-202ENST00000481738 PSME1Q06323 249 aa12.91□□□□□ -0.34
LINC00544-202ENST00000481738 NGLY1Q96IV0 654 aa12.9□□□□□ -0.34
LINC00544-202ENST00000481738 CDK19Q9BWU1 502 aa12.9□□□□□ -0.34
LINC00544-202ENST00000481738 CENPJQ9HC77 1338 aaPredicted RBP12.89□□□□□ -0.35
LINC00544-202ENST00000481738 NBPF8Q3BBV2 869 aa12.89□□□□□ -0.35
LINC00544-202ENST00000481738 NUDT16Q96DE0 195 aaKnown RBP12.89□□□□□ -0.35
LINC00544-202ENST00000481738 ROCK2O75116 1388 aaKnown RBP12.89□□□□□ -0.35
LINC00544-202ENST00000481738 TONSLQ96HA7 1378 aa12.89□□□□□ -0.35
LINC00544-202ENST00000481738 TNS3Q68CZ2 1445 aa12.88□□□□□ -0.35
LINC00544-202ENST00000481738 LMOD2Q6P5Q4 547 aa12.88□□□□□ -0.35
LINC00544-202ENST00000481738 SBNO1A3KN83 1393 aa12.88□□□□□ -0.35
LINC00544-202ENST00000481738 ATP7BP35670 1465 aa12.88□□□□□ -0.35
LINC00544-202ENST00000481738 ITSN1Q15811 1721 aa12.88□□□□□ -0.35
LINC00544-202ENST00000481738 QRICH2Q9H0J4 1663 aa12.87□□□□□ -0.35
LINC00544-202ENST00000481738 GPRASP1Q5JY77 1395 aa12.87□□□□□ -0.35
LINC00544-202ENST00000481738 PLEKHG5O94827 1062 aa12.87□□□□□ -0.35
LINC00544-202ENST00000481738 NGDNQ8NEJ9 315 aaKnown RBP12.87□□□□□ -0.35
LINC00544-202ENST00000481738 RXRBP28702 533 aa12.86□□□□□ -0.35
LINC00544-202ENST00000481738 TRPM3Q9HCF6 1732 aaPredicted RBP12.85□□□□□ -0.35
LINC00544-202ENST00000481738 MARF1Q9Y4F3 1742 aaKnown RBP12.85□□□□□ -0.35
LINC00544-202ENST00000481738 HAP1P54257 671 aaPredicted RBP12.85□□□□□ -0.35
LINC00544-202ENST00000481738 SRPK2P78362 688 aaKnown RBP12.85□□□□□ -0.35
LINC00544-202ENST00000481738 CABLES1Q8TDN4 633 aa12.85□□□□□ -0.35
LINC00544-202ENST00000481738 QTRT2Q9H974 415 aaKnown RBP12.85□□□□□ -0.35
LINC00544-202ENST00000481738 USP21Q9UK80 565 aa12.85□□□□□ -0.35
LINC00544-202ENST00000481738 ARHGEF10O15013 1369 aa12.84□□□□□ -0.35
LINC00544-202ENST00000481738 TOPAZ1Q8N9V7 1692 aa12.84□□□□□ -0.35
LINC00544-202ENST00000481738 CCDC61Q9Y6R9 512 aa12.84□□□□□ -0.35
LINC00544-202ENST00000481738 PAK3O75914 559 aaPredicted RBP12.83□□□□□ -0.36
LINC00544-202ENST00000481738 FNBP4Q8N3X1 1017 aaPredicted RBP12.83□□□□□ -0.36
LINC00544-202ENST00000481738 PCGF6Q9BYE7 350 aa12.83□□□□□ -0.36
LINC00544-202ENST00000481738 CABP2Q9NPB3 220 aa12.83□□□□□ -0.36
LINC00544-202ENST00000481738 ALS2Q96Q42 1657 aa12.83□□□□□ -0.36
LINC00544-202ENST00000481738 RBM6P78332 1123 aaKnown RBP12.82□□□□□ -0.36
LINC00544-202ENST00000481738 CARD11Q9BXL7 1154 aa12.82□□□□□ -0.36
LINC00544-202ENST00000481738 ACEP12821 1306 aa12.82□□□□□ -0.36
LINC00544-202ENST00000481738 ABCA3Q99758 1704 aa12.82□□□□□ -0.36
LINC00544-202ENST00000481738 RALGAPBQ86X10 1494 aa12.81□□□□□ -0.36
LINC00544-202ENST00000481738 PLEKHG3A1L390 1219 aa12.81□□□□□ -0.36
LINC00544-202ENST00000481738 TRPC5Q9UL62 973 aaPredicted RBP12.81□□□□□ -0.36
LINC00544-202ENST00000481738 EVC2Q86UK5 1308 aa12.81□□□□□ -0.36
LINC00544-202ENST00000481738 POLR3AO14802 1390 aaPredicted RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms