RNA–Protein interactions for RNA: ENST00000481644.1

HSPG2-210, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 839 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-210ENST00000481644 SIRT1Q96EB6 747 aa27.18■■□□□ 1.94
HSPG2-210ENST00000481644 JCADQ9P266 1359 aa27.16■■□□□ 1.94
HSPG2-210ENST00000481644 DLC1Q96QB1 1528 aa27.16■■□□□ 1.94
HSPG2-210ENST00000481644 PHF23Q9BUL5 403 aaPredicted RBP27.12■■□□□ 1.93
HSPG2-210ENST00000481644 PRAM1Q96QH2 718 aa27.11■■□□□ 1.93
HSPG2-210ENST00000481644 FMN2Q9NZ56 1722 aa27.1■■□□□ 1.93
HSPG2-210ENST00000481644 KIAA1210Q9ULL0 1709 aa27.1■■□□□ 1.93
HSPG2-210ENST00000481644 ORAI2Q96SN7 254 aa27.1■■□□□ 1.93
HSPG2-210ENST00000481644 SIN3AQ96ST3 1273 aa27.1■■□□□ 1.93
HSPG2-210ENST00000481644 TRAK1Q9UPV9 953 aa27.1■■□□□ 1.93
HSPG2-210ENST00000481644 SHPRHQ149N8 1683 aa27.1■■□□□ 1.93
HSPG2-210ENST00000481644 SAFB2Q14151 953 aaKnown RBP eCLIP27.09■■□□□ 1.93
HSPG2-210ENST00000481644 POGKQ9P215 609 aa27.09■■□□□ 1.93
HSPG2-210ENST00000481644 DDX17Q92841 729 aaKnown RBP27.08■■□□□ 1.93
HSPG2-210ENST00000481644 NEUROD1Q13562 356 aa27.07■■□□□ 1.92
HSPG2-210ENST00000481644 ILDR2Q71H61 639 aa27.07■■□□□ 1.92
HSPG2-210ENST00000481644 NUTM2FA1L443 756 aa27.05■■□□□ 1.92
HSPG2-210ENST00000481644 ESCO1Q5FWF5 840 aa27.05■■□□□ 1.92
HSPG2-210ENST00000481644 ARHGEF28Q8N1W1 1705 aaKnown RBP27.04■■□□□ 1.92
HSPG2-210ENST00000481644 L3MBTL2Q969R5 705 aa27.04■■□□□ 1.92
HSPG2-210ENST00000481644 SPATA31A6Q5VVP1 1343 aa27.03■■□□□ 1.92
HSPG2-210ENST00000481644 ADGRB2O60241 1585 aa27.02■■□□□ 1.92
HSPG2-210ENST00000481644 LRRC59Q96AG4 307 aaKnown RBP27.02■■□□□ 1.92
HSPG2-210ENST00000481644 RGPD8O14715 1765 aaPredicted RBP27■■□□□ 1.91
HSPG2-210ENST00000481644 KIF1AQ12756 1690 aa26.98■■□□□ 1.91
HSPG2-210ENST00000481644 SOS2Q07890 1332 aaPredicted RBP26.98■■□□□ 1.91
HSPG2-210ENST00000481644 LRP6O75581 1613 aa26.98■■□□□ 1.91
HSPG2-210ENST00000481644 NPHP3Q7Z494 1330 aa26.97■■□□□ 1.91
HSPG2-210ENST00000481644 MINK1Q8N4C8 1332 aaPredicted RBP26.97■■□□□ 1.91
HSPG2-210ENST00000481644 NBPF1Q3BBV0 1214 aa26.97■■□□□ 1.91
HSPG2-210ENST00000481644 HIRIP3Q9BW71 556 aaPredicted RBP26.96■■□□□ 1.91
HSPG2-210ENST00000481644 PNPLA6Q8IY17 1366 aa26.95■■□□□ 1.9
HSPG2-210ENST00000481644 NUTM2BA6NNL0 878 aaPredicted RBP26.93■■□□□ 1.9
HSPG2-210ENST00000481644 NUTM2EB1AL46 878 aaPredicted RBP26.93■■□□□ 1.9
HSPG2-210ENST00000481644 FOXO3O43524 673 aa26.93■■□□□ 1.9
HSPG2-210ENST00000481644 MEX3CQ5U5Q3 659 aaKnown RBP26.93■■□□□ 1.9
HSPG2-210ENST00000481644 NUTM2AQ8IVF1 878 aaPredicted RBP26.93■■□□□ 1.9
HSPG2-210ENST00000481644 TRPM1Q7Z4N2 1603 aa26.93■■□□□ 1.9
HSPG2-210ENST00000481644 PXDNQ92626 1479 aa26.93■■□□□ 1.9
HSPG2-210ENST00000481644 ANKARQ7Z5J8 1434 aa26.92■■□□□ 1.9
HSPG2-210ENST00000481644 USP32Q8NFA0 1604 aa26.92■■□□□ 1.9
HSPG2-210ENST00000481644 RGS17Q9UGC6 210 aaPredicted RBP26.92■■□□□ 1.9
HSPG2-210ENST00000481644 EIF3AQ14152 1382 aaKnown RBP26.9■■□□□ 1.9
HSPG2-210ENST00000481644 XPCQ01831 940 aaPredicted RBP26.89■■□□□ 1.9
HSPG2-210ENST00000481644 PHF8Q9UPP1 1060 aa26.89■■□□□ 1.9
HSPG2-210ENST00000481644 WASLO00401 505 aaPredicted RBP26.88■■□□□ 1.89
HSPG2-210ENST00000481644 TULP4Q9NRJ4 1543 aa26.88■■□□□ 1.89
HSPG2-210ENST00000481644 TONSLQ96HA7 1378 aa26.87■■□□□ 1.89
HSPG2-210ENST00000481644 COL22A1Q8NFW1 1626 aaPredicted RBP26.86■■□□□ 1.89
HSPG2-210ENST00000481644 PRR36Q9H6K5 1346 aa26.83■■□□□ 1.89
HSPG2-210ENST00000481644 ROCK2O75116 1388 aaKnown RBP26.83■■□□□ 1.88
HSPG2-210ENST00000481644 KRT28Q7Z3Y7 464 aa26.82■■□□□ 1.88
HSPG2-210ENST00000481644 QRICH2Q9H0J4 1663 aa26.82■■□□□ 1.88
HSPG2-210ENST00000481644 ITSN1Q15811 1721 aa26.82■■□□□ 1.88
HSPG2-210ENST00000481644 PMFBP1Q8TBY8 1022 aa26.81■■□□□ 1.88
HSPG2-210ENST00000481644 PCGF6Q9BYE7 350 aa26.81■■□□□ 1.88
HSPG2-210ENST00000481644 CENPJQ9HC77 1338 aaPredicted RBP26.81■■□□□ 1.88
HSPG2-210ENST00000481644 SOCS7O14512 581 aa26.8■■□□□ 1.88
HSPG2-210ENST00000481644 NBPF8Q3BBV2 869 aa26.8■■□□□ 1.88
HSPG2-210ENST00000481644 POTEAQ6S8J7 498 aa26.8■■□□□ 1.88
HSPG2-210ENST00000481644 PSME1Q06323 249 aa26.78■■□□□ 1.88
HSPG2-210ENST00000481644 CDK19Q9BWU1 502 aa26.78■■□□□ 1.88
HSPG2-210ENST00000481644 SPATA31A3Q5VYP0 1347 aa26.78■■□□□ 1.88
HSPG2-210ENST00000481644 ATP7BP35670 1465 aa26.78■■□□□ 1.88
HSPG2-210ENST00000481644 ADAMTS2O95450 1211 aa26.76■■□□□ 1.87
HSPG2-210ENST00000481644 ZNF772Q68DY9 489 aaPredicted RBP26.76■■□□□ 1.87
HSPG2-210ENST00000481644 C8orf37Q96NL8 207 aa26.76■■□□□ 1.87
HSPG2-210ENST00000481644 TNS3Q68CZ2 1445 aa26.75■■□□□ 1.87
HSPG2-210ENST00000481644 NUDT16Q96DE0 195 aaKnown RBP26.75■■□□□ 1.87
HSPG2-210ENST00000481644 SBNO1A3KN83 1393 aa26.74■■□□□ 1.87
HSPG2-210ENST00000481644 AFF2P51816 1311 aa26.74■■□□□ 1.87
HSPG2-210ENST00000481644 TOPAZ1Q8N9V7 1692 aa26.73■■□□□ 1.87
HSPG2-210ENST00000481644 GPRASP1Q5JY77 1395 aa26.72■■□□□ 1.87
HSPG2-210ENST00000481644 NGDNQ8NEJ9 315 aaKnown RBP26.72■■□□□ 1.87
HSPG2-210ENST00000481644 TRPM3Q9HCF6 1732 aaPredicted RBP26.72■■□□□ 1.87
HSPG2-210ENST00000481644 MARF1Q9Y4F3 1742 aaKnown RBP26.71■■□□□ 1.87
HSPG2-210ENST00000481644 RALGAPBQ86X10 1494 aa26.71■■□□□ 1.87
HSPG2-210ENST00000481644 SRPK2P78362 688 aaKnown RBP26.69■■□□□ 1.86
HSPG2-210ENST00000481644 LMOD2Q6P5Q4 547 aa26.69■■□□□ 1.86
HSPG2-210ENST00000481644 NGLY1Q96IV0 654 aa26.69■■□□□ 1.86
HSPG2-210ENST00000481644 ARHGEF10O15013 1369 aa26.68■■□□□ 1.86
HSPG2-210ENST00000481644 CARD11Q9BXL7 1154 aa26.67■■□□□ 1.86
HSPG2-210ENST00000481644 CCDC61Q9Y6R9 512 aa26.67■■□□□ 1.86
HSPG2-210ENST00000481644 ALS2Q96Q42 1657 aa26.66■■□□□ 1.86
HSPG2-210ENST00000481644 CABP2Q9NPB3 220 aa26.65■■□□□ 1.86
HSPG2-210ENST00000481644 ABCA3Q99758 1704 aa26.65■■□□□ 1.86
HSPG2-210ENST00000481644 EVC2Q86UK5 1308 aa26.64■■□□□ 1.85
HSPG2-210ENST00000481644 CLSPNQ9HAW4 1339 aa26.63■■□□□ 1.85
HSPG2-210ENST00000481644 POLR3AO14802 1390 aaPredicted RBP26.62■■□□□ 1.85
HSPG2-210ENST00000481644 PLEKHG5O94827 1062 aa26.62■■□□□ 1.85
HSPG2-210ENST00000481644 HAP1P54257 671 aaPredicted RBP26.62■■□□□ 1.85
HSPG2-210ENST00000481644 PPIP5K1Q6PFW1 1433 aa26.62■■□□□ 1.85
HSPG2-210ENST00000481644 PLEKHG3A1L390 1219 aa26.61■■□□□ 1.85
HSPG2-210ENST00000481644 CABLES1Q8TDN4 633 aa26.61■■□□□ 1.85
HSPG2-210ENST00000481644 ACEP12821 1306 aa26.61■■□□□ 1.85
HSPG2-210ENST00000481644 PAK3O75914 559 aaPredicted RBP26.6■■□□□ 1.85
HSPG2-210ENST00000481644 USP21Q9UK80 565 aa26.6■■□□□ 1.85
HSPG2-210ENST00000481644 RXRBP28702 533 aa26.59■■□□□ 1.85
HSPG2-210ENST00000481644 FNBP4Q8N3X1 1017 aaPredicted RBP26.59■■□□□ 1.85
HSPG2-210ENST00000481644 QTRT2Q9H974 415 aaKnown RBP26.58■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms