RNA–Protein interactions for RNA: ENST00000481281.5

HDAC1-207, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-207ENST00000481281 WAPLQ7Z5K2 1190 aa18.99■□□□□ 0.63
HDAC1-207ENST00000481281 KDM2AQ9Y2K7 1162 aa18.99■□□□□ 0.63
HDAC1-207ENST00000481281 KIAA1210Q9ULL0 1709 aa18.98■□□□□ 0.63
HDAC1-207ENST00000481281 SHPRHQ149N8 1683 aa18.98■□□□□ 0.63
HDAC1-207ENST00000481281 FMN2Q9NZ56 1722 aa18.97■□□□□ 0.63
HDAC1-207ENST00000481281 JCADQ9P266 1359 aa18.97■□□□□ 0.63
HDAC1-207ENST00000481281 ADGRB2O60241 1585 aa18.93■□□□□ 0.62
HDAC1-207ENST00000481281 ARHGEF28Q8N1W1 1705 aaKnown RBP18.93■□□□□ 0.62
HDAC1-207ENST00000481281 ILDR2Q71H61 639 aa18.92■□□□□ 0.62
HDAC1-207ENST00000481281 PRAM1Q96QH2 718 aa18.91■□□□□ 0.62
HDAC1-207ENST00000481281 ORAI2Q96SN7 254 aa18.91■□□□□ 0.62
HDAC1-207ENST00000481281 SIN3AQ96ST3 1273 aa18.9■□□□□ 0.62
HDAC1-207ENST00000481281 DDX17Q92841 729 aaKnown RBP18.89■□□□□ 0.61
HDAC1-207ENST00000481281 SPATA31A6Q5VVP1 1343 aa18.89■□□□□ 0.61
HDAC1-207ENST00000481281 LRP6O75581 1613 aa18.89■□□□□ 0.61
HDAC1-207ENST00000481281 KIF1AQ12756 1690 aa18.89■□□□□ 0.61
HDAC1-207ENST00000481281 PHF23Q9BUL5 403 aaPredicted RBP18.88■□□□□ 0.61
HDAC1-207ENST00000481281 TRAK1Q9UPV9 953 aa18.88■□□□□ 0.61
HDAC1-207ENST00000481281 RGPD8O14715 1765 aaPredicted RBP18.88■□□□□ 0.61
HDAC1-207ENST00000481281 SOS2Q07890 1332 aaPredicted RBP18.87■□□□□ 0.61
HDAC1-207ENST00000481281 L3MBTL2Q969R5 705 aa18.87■□□□□ 0.61
HDAC1-207ENST00000481281 USP32Q8NFA0 1604 aa18.86■□□□□ 0.61
HDAC1-207ENST00000481281 SAFB2Q14151 953 aaKnown RBP eCLIP18.86■□□□□ 0.61
HDAC1-207ENST00000481281 LRRC59Q96AG4 307 aaKnown RBP18.86■□□□□ 0.61
HDAC1-207ENST00000481281 POGKQ9P215 609 aa18.86■□□□□ 0.61
HDAC1-207ENST00000481281 ESCO1Q5FWF5 840 aa18.85■□□□□ 0.61
HDAC1-207ENST00000481281 PXDNQ92626 1479 aa18.84■□□□□ 0.61
HDAC1-207ENST00000481281 PNPLA6Q8IY17 1366 aa18.84■□□□□ 0.61
HDAC1-207ENST00000481281 TRPM1Q7Z4N2 1603 aa18.84■□□□□ 0.61
HDAC1-207ENST00000481281 ANKARQ7Z5J8 1434 aa18.83■□□□□ 0.61
HDAC1-207ENST00000481281 NPHP3Q7Z494 1330 aa18.83■□□□□ 0.61
HDAC1-207ENST00000481281 NUTM2FA1L443 756 aa18.83■□□□□ 0.6
HDAC1-207ENST00000481281 RGS17Q9UGC6 210 aaPredicted RBP18.83■□□□□ 0.6
HDAC1-207ENST00000481281 COL22A1Q8NFW1 1626 aaPredicted RBP18.82■□□□□ 0.6
HDAC1-207ENST00000481281 NEUROD1Q13562 356 aa18.82■□□□□ 0.6
HDAC1-207ENST00000481281 NBPF1Q3BBV0 1214 aa18.82■□□□□ 0.6
HDAC1-207ENST00000481281 TULP4Q9NRJ4 1543 aa18.8■□□□□ 0.6
HDAC1-207ENST00000481281 MINK1Q8N4C8 1332 aaPredicted RBP18.8■□□□□ 0.6
HDAC1-207ENST00000481281 EIF3AQ14152 1382 aaKnown RBP18.8■□□□□ 0.6
HDAC1-207ENST00000481281 FOXO3O43524 673 aa18.79■□□□□ 0.6
HDAC1-207ENST00000481281 HIRIP3Q9BW71 556 aaPredicted RBP18.78■□□□□ 0.6
HDAC1-207ENST00000481281 PHF8Q9UPP1 1060 aa18.77■□□□□ 0.6
HDAC1-207ENST00000481281 WASLO00401 505 aaPredicted RBP18.76■□□□□ 0.59
HDAC1-207ENST00000481281 ITSN1Q15811 1721 aa18.76■□□□□ 0.59
HDAC1-207ENST00000481281 PRR36Q9H6K5 1346 aa18.75■□□□□ 0.59
HDAC1-207ENST00000481281 ATP7BP35670 1465 aa18.75■□□□□ 0.59
HDAC1-207ENST00000481281 QRICH2Q9H0J4 1663 aa18.75■□□□□ 0.59
HDAC1-207ENST00000481281 NUTM2BA6NNL0 878 aaPredicted RBP18.74■□□□□ 0.59
HDAC1-207ENST00000481281 NUTM2EB1AL46 878 aaPredicted RBP18.74■□□□□ 0.59
HDAC1-207ENST00000481281 XPCQ01831 940 aaPredicted RBP18.74■□□□□ 0.59
HDAC1-207ENST00000481281 NUTM2AQ8IVF1 878 aaPredicted RBP18.74■□□□□ 0.59
HDAC1-207ENST00000481281 TOPAZ1Q8N9V7 1692 aa18.73■□□□□ 0.59
HDAC1-207ENST00000481281 TONSLQ96HA7 1378 aa18.73■□□□□ 0.59
HDAC1-207ENST00000481281 MEX3CQ5U5Q3 659 aaKnown RBP18.73■□□□□ 0.59
HDAC1-207ENST00000481281 SOCS7O14512 581 aa18.72■□□□□ 0.59
HDAC1-207ENST00000481281 POTEAQ6S8J7 498 aa18.72■□□□□ 0.59
HDAC1-207ENST00000481281 TRPM3Q9HCF6 1732 aaPredicted RBP18.71■□□□□ 0.59
HDAC1-207ENST00000481281 ROCK2O75116 1388 aaKnown RBP18.71■□□□□ 0.59
HDAC1-207ENST00000481281 GPRASP1Q5JY77 1395 aa18.71■□□□□ 0.59
HDAC1-207ENST00000481281 NBPF8Q3BBV2 869 aa18.71■□□□□ 0.59
HDAC1-207ENST00000481281 SPATA31A3Q5VYP0 1347 aa18.71■□□□□ 0.59
HDAC1-207ENST00000481281 CENPJQ9HC77 1338 aaPredicted RBP18.71■□□□□ 0.59
HDAC1-207ENST00000481281 TNS3Q68CZ2 1445 aa18.7■□□□□ 0.58
HDAC1-207ENST00000481281 KRT28Q7Z3Y7 464 aa18.7■□□□□ 0.58
HDAC1-207ENST00000481281 MARF1Q9Y4F3 1742 aaKnown RBP18.7■□□□□ 0.58
HDAC1-207ENST00000481281 SBNO1A3KN83 1393 aa18.69■□□□□ 0.58
HDAC1-207ENST00000481281 RALGAPBQ86X10 1494 aa18.69■□□□□ 0.58
HDAC1-207ENST00000481281 PMFBP1Q8TBY8 1022 aa18.68■□□□□ 0.58
HDAC1-207ENST00000481281 ALS2Q96Q42 1657 aa18.67■□□□□ 0.58
HDAC1-207ENST00000481281 ABCA3Q99758 1704 aa18.67■□□□□ 0.58
HDAC1-207ENST00000481281 PSME1Q06323 249 aa18.67■□□□□ 0.58
HDAC1-207ENST00000481281 ZNF772Q68DY9 489 aaPredicted RBP18.67■□□□□ 0.58
HDAC1-207ENST00000481281 CDK19Q9BWU1 502 aa18.67■□□□□ 0.58
HDAC1-207ENST00000481281 NUDT16Q96DE0 195 aaKnown RBP18.66■□□□□ 0.58
HDAC1-207ENST00000481281 AFF2P51816 1311 aa18.66■□□□□ 0.58
HDAC1-207ENST00000481281 PCGF6Q9BYE7 350 aa18.65■□□□□ 0.58
HDAC1-207ENST00000481281 ADAMTS2O95450 1211 aa18.64■□□□□ 0.57
HDAC1-207ENST00000481281 C8orf37Q96NL8 207 aa18.64■□□□□ 0.57
HDAC1-207ENST00000481281 ARHGEF10O15013 1369 aa18.64■□□□□ 0.57
HDAC1-207ENST00000481281 POLR3AO14802 1390 aaPredicted RBP18.63■□□□□ 0.57
HDAC1-207ENST00000481281 CCDC61Q9Y6R9 512 aa18.62■□□□□ 0.57
HDAC1-207ENST00000481281 CRYBG1Q9Y4K1 1723 aa18.61■□□□□ 0.57
HDAC1-207ENST00000481281 CLSPNQ9HAW4 1339 aa18.61■□□□□ 0.57
HDAC1-207ENST00000481281 NGDNQ8NEJ9 315 aaKnown RBP18.61■□□□□ 0.57
HDAC1-207ENST00000481281 SBNO2Q9Y2G9 1366 aa18.6■□□□□ 0.57
HDAC1-207ENST00000481281 NGLY1Q96IV0 654 aa18.6■□□□□ 0.57
HDAC1-207ENST00000481281 PLEKHG3A1L390 1219 aa18.59■□□□□ 0.57
HDAC1-207ENST00000481281 SRPK2P78362 688 aaKnown RBP18.59■□□□□ 0.57
HDAC1-207ENST00000481281 FNBP4Q8N3X1 1017 aaPredicted RBP18.59■□□□□ 0.57
HDAC1-207ENST00000481281 CARD11Q9BXL7 1154 aa18.59■□□□□ 0.57
HDAC1-207ENST00000481281 PPIP5K1Q6PFW1 1433 aa18.58■□□□□ 0.57
HDAC1-207ENST00000481281 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.58■□□□□ 0.57
HDAC1-207ENST00000481281 CABP2Q9NPB3 220 aa18.58■□□□□ 0.56
HDAC1-207ENST00000481281 CDK12Q9NYV4 1490 aaPredicted RBP18.58■□□□□ 0.56
HDAC1-207ENST00000481281 EVC2Q86UK5 1308 aa18.57■□□□□ 0.56
HDAC1-207ENST00000481281 ACEP12821 1306 aa18.56■□□□□ 0.56
HDAC1-207ENST00000481281 LMOD2Q6P5Q4 547 aa18.56■□□□□ 0.56
HDAC1-207ENST00000481281 BCL9LQ86UU0 1499 aa18.56■□□□□ 0.56
HDAC1-207ENST00000481281 SLIT2O94813 1529 aa18.55■□□□□ 0.56
HDAC1-207ENST00000481281 PLCH1Q4KWH8 1693 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms