RNA–Protein interactions for RNA: ENST00000480956.1

LSM5-210, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM5, Length 1,736 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-210ENST00000480956 ARSIQ5FYB1 569 aa11.47□□□□□ -0.57
LSM5-210ENST00000480956 RIC3Q7Z5B4 369 aa11.47□□□□□ -0.57
LSM5-210ENST00000480956 DOK7Q18PE1 504 aa11.46□□□□□ -0.57
LSM5-210ENST00000480956 ZNF710Q8N1W2 664 aa11.46□□□□□ -0.57
LSM5-210ENST00000480956 ZNF526Q8TF50 670 aaPredicted RBP11.46□□□□□ -0.57
LSM5-210ENST00000480956 ARID4AP29374 1257 aaPredicted RBP11.46□□□□□ -0.58
LSM5-210ENST00000480956 DPH6Q7L8W6 267 aa11.45□□□□□ -0.58
LSM5-210ENST00000480956 FAM163AQ96GL9 167 aaPredicted RBP11.45□□□□□ -0.58
LSM5-210ENST00000480956 UCN2Q96RP3 112 aa11.45□□□□□ -0.58
LSM5-210ENST00000480956 ALG2Q9H553 416 aa11.45□□□□□ -0.58
LSM5-210ENST00000480956 VAC14Q08AM6 782 aa11.44□□□□□ -0.58
LSM5-210ENST00000480956 MAFBQ9Y5Q3 323 aaPredicted RBP11.44□□□□□ -0.58
LSM5-210ENST00000480956 ANKRD33BA6NCL7 494 aa11.43□□□□□ -0.58
LSM5-210ENST00000480956 SOWAHDA6NJG2 315 aa11.43□□□□□ -0.58
LSM5-210ENST00000480956 SNPHO15079 494 aa11.43□□□□□ -0.58
LSM5-210ENST00000480956 USP17L8P0C7I0 530 aa11.43□□□□□ -0.58
LSM5-210ENST00000480956 NPAS4Q8IUM7 802 aa11.43□□□□□ -0.58
LSM5-210ENST00000480956 HOXB1P14653 301 aaPredicted RBP11.43□□□□□ -0.58
LSM5-210ENST00000480956 TUSC1Q2TAM9 212 aa11.43□□□□□ -0.58
LSM5-210ENST00000480956 PHLDB3Q6NSJ2 640 aa11.43□□□□□ -0.58
LSM5-210ENST00000480956 ZNF662Q6ZS27 426 aa11.43□□□□□ -0.58
LSM5-210ENST00000480956 PLEKHD1A6NEE1 506 aa11.42□□□□□ -0.58
LSM5-210ENST00000480956 RECKO95980 971 aa11.42□□□□□ -0.58
LSM5-210ENST00000480956 ZSWIM6Q9HCJ5 1215 aa11.41□□□□□ -0.58
LSM5-210ENST00000480956 NUDT7P0C024 238 aa11.4□□□□□ -0.58
LSM5-210ENST00000480956 MICAL1Q8TDZ2 1067 aa11.4□□□□□ -0.58
LSM5-210ENST00000480956 NLRP7Q8WX94 980 aa11.4□□□□□ -0.58
LSM5-210ENST00000480956 GJD4Q96KN9 370 aaPredicted RBP11.4□□□□□ -0.58
LSM5-210ENST00000480956 CSPP1Q1MSJ5 1256 aa11.4□□□□□ -0.58
LSM5-210ENST00000480956 TMEM164Q5U3C3 297 aa11.4□□□□□ -0.58
LSM5-210ENST00000480956 ERCC5P28715 1186 aaPredicted RBP11.39□□□□□ -0.59
LSM5-210ENST00000480956 ELOAQ14241 798 aaKnown RBP11.39□□□□□ -0.59
LSM5-210ENST00000480956 TMED8Q6PL24 325 aaPredicted RBP11.39□□□□□ -0.59
LSM5-210ENST00000480956 NOP9Q86U38 636 aaKnown RBP11.39□□□□□ -0.59
LSM5-210ENST00000480956 RIPOR2Q9Y4F9 1068 aa11.39□□□□□ -0.59
LSM5-210ENST00000480956 METTL3Q86U44 580 aaKnown RBP11.38□□□□□ -0.59
LSM5-210ENST00000480956 MARVELD3Q96A59 401 aa11.38□□□□□ -0.59
LSM5-210ENST00000480956 ANO8Q9HCE9 1232 aaPredicted RBP11.38□□□□□ -0.59
LSM5-210ENST00000480956 BIN2Q9UBW5 565 aaPredicted RBP11.38□□□□□ -0.59
LSM5-210ENST00000480956 LOC102724159A0A0B4J2E5 919 aa11.38□□□□□ -0.59
LSM5-210ENST00000480956 POTEB3A0JP26 581 aa11.38□□□□□ -0.59
LSM5-210ENST00000480956 PWP2Q15269 919 aaKnown RBP11.38□□□□□ -0.59
LSM5-210ENST00000480956 POTEBQ6S5H4 581 aa11.38□□□□□ -0.59
LSM5-210ENST00000480956 BCL11AQ9H165 835 aa11.38□□□□□ -0.59
LSM5-210ENST00000480956 NPDC1Q9NQX5 325 aaPredicted RBP11.38□□□□□ -0.59
LSM5-210ENST00000480956 TMA7Q9Y2S6 64 aaKnown RBP11.38□□□□□ -0.59
LSM5-210ENST00000480956 EVI5O60447 810 aa11.37□□□□□ -0.59
LSM5-210ENST00000480956 CDHR5Q9HBB8 845 aa11.37□□□□□ -0.59
LSM5-210ENST00000480956 PPME1Q9Y570 386 aa11.37□□□□□ -0.59
LSM5-210ENST00000480956 SPTLC1O15269 473 aa11.36□□□□□ -0.59
LSM5-210ENST00000480956 TSNAXIP1Q2TAA8 658 aa11.36□□□□□ -0.59
LSM5-210ENST00000480956 STK32AQ8WU08 396 aa11.36□□□□□ -0.59
LSM5-210ENST00000480956 ZMIZ1Q9ULJ6 1067 aa11.36□□□□□ -0.59
LSM5-210ENST00000480956 OATP04181 439 aa11.35□□□□□ -0.59
LSM5-210ENST00000480956 SSFA2P28290 1259 aa11.35□□□□□ -0.59
LSM5-210ENST00000480956 QPCTQ16769 361 aa11.35□□□□□ -0.59
LSM5-210ENST00000480956 SPIRE2Q8WWL2 714 aa11.35□□□□□ -0.59
LSM5-210ENST00000480956 PRDM16Q9HAZ2 1276 aa11.35□□□□□ -0.59
LSM5-210ENST00000480956 RIMBP2O15034 1052 aa11.35□□□□□ -0.59
LSM5-210ENST00000480956 RAB11FIP3O75154 756 aa11.35□□□□□ -0.59
LSM5-210ENST00000480956 SOX11P35716 441 aa11.35□□□□□ -0.59
LSM5-210ENST00000480956 PRR7Q8TB68 274 aa11.35□□□□□ -0.59
LSM5-210ENST00000480956 MYH16Q9H6N6 1097 aa11.35□□□□□ -0.59
LSM5-210ENST00000480956 LILRB3O75022 631 aa11.33□□□□□ -0.6
LSM5-210ENST00000480956 SERPINB4P48594 390 aa11.33□□□□□ -0.6
LSM5-210ENST00000480956 RSBN1LQ6PCB5 846 aaPredicted RBP11.33□□□□□ -0.6
LSM5-210ENST00000480956 TBC1D9Q6ZT07 1266 aa11.33□□□□□ -0.6
LSM5-210ENST00000480956 LHX6Q9UPM6 363 aa11.33□□□□□ -0.6
LSM5-210ENST00000480956 GPR37L1O60883 481 aa11.32□□□□□ -0.6
LSM5-210ENST00000480956 RBM46Q8TBY0 533 aaKnown RBP11.32□□□□□ -0.6
LSM5-210ENST00000480956 FAM161AQ3B820 660 aa11.32□□□□□ -0.6
LSM5-210ENST00000480956 RTL5Q5HYW3 569 aaPredicted RBP11.31□□□□□ -0.6
LSM5-210ENST00000480956 DNAJC2Q99543 621 aaKnown RBP11.31□□□□□ -0.6
LSM5-210ENST00000480956 NOVA2Q9UNW9 492 aaKnown RBP11.31□□□□□ -0.6
LSM5-210ENST00000480956 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.31□□□□□ -0.6
LSM5-210ENST00000480956 ATP9BO43861 1147 aa11.3□□□□□ -0.6
LSM5-210ENST00000480956 FOSBP53539 338 aa11.3□□□□□ -0.6
LSM5-210ENST00000480956 SEMA3FQ13275 785 aa11.3□□□□□ -0.6
LSM5-210ENST00000480956 FBXO33Q7Z6M2 555 aa11.3□□□□□ -0.6
LSM5-210ENST00000480956 TANGO6Q9C0B7 1094 aa11.3□□□□□ -0.6
LSM5-210ENST00000480956 NUTM2BA6NNL0 878 aaPredicted RBP11.29□□□□□ -0.6
LSM5-210ENST00000480956 NUTM2EB1AL46 878 aaPredicted RBP11.29□□□□□ -0.6
LSM5-210ENST00000480956 KANK4Q5T7N3 995 aaPredicted RBP11.29□□□□□ -0.6
LSM5-210ENST00000480956 NUTM2DQ5VT03 806 aaPredicted RBP11.29□□□□□ -0.6
LSM5-210ENST00000480956 NUTM2AQ8IVF1 878 aaPredicted RBP11.29□□□□□ -0.6
LSM5-210ENST00000480956 LNPKQ9C0E8 428 aa11.29□□□□□ -0.6
LSM5-210ENST00000480956 TAGLNQ01995 201 aaKnown RBP11.29□□□□□ -0.6
LSM5-210ENST00000480956 CUEDC1Q9NWM3 386 aaPredicted RBP11.29□□□□□ -0.6
LSM5-210ENST00000480956 RBM27Q9P2N5 1060 aaKnown RBP11.29□□□□□ -0.6
LSM5-210ENST00000480956 SUGT1Q9Y2Z0 365 aa11.29□□□□□ -0.6
LSM5-210ENST00000480956 SBNO2Q9Y2G9 1366 aa11.28□□□□□ -0.6
LSM5-210ENST00000480956 PXYLP1Q8TE99 480 aa11.28□□□□□ -0.6
LSM5-210ENST00000480956 TPD52L2O43399 206 aaKnown RBP11.27□□□□□ -0.61
LSM5-210ENST00000480956 GORABQ5T7V8 394 aa11.27□□□□□ -0.61
LSM5-210ENST00000480956 METTL14Q9HCE5 456 aaKnown RBP11.27□□□□□ -0.61
LSM5-210ENST00000480956 TLDC2A0PJX2 215 aa11.26□□□□□ -0.61
LSM5-210ENST00000480956 EN1Q05925 392 aaPredicted RBP11.26□□□□□ -0.61
LSM5-210ENST00000480956 CDCA7Q9BWT1 371 aaPredicted RBP11.26□□□□□ -0.61
LSM5-210ENST00000480956 MAP3K7O43318 606 aa11.26□□□□□ -0.61
LSM5-210ENST00000480956 EMP3P54852 163 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 1050.1 ms