RNA–Protein interactions for RNA: ENST00000480900.1

HSPG2-209, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 500 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-209ENST00000480900 SIRT1Q96EB6 747 aa24.81■■□□□ 1.56
HSPG2-209ENST00000480900 WAPLQ7Z5K2 1190 aa24.8■■□□□ 1.56
HSPG2-209ENST00000480900 KDM2AQ9Y2K7 1162 aa24.8■■□□□ 1.56
HSPG2-209ENST00000480900 DLC1Q96QB1 1528 aa24.8■■□□□ 1.56
HSPG2-209ENST00000480900 PLEKHH1Q9ULM0 1364 aa24.8■■□□□ 1.56
HSPG2-209ENST00000480900 FMN2Q9NZ56 1722 aa24.78■■□□□ 1.56
HSPG2-209ENST00000480900 SPATA31A6Q5VVP1 1343 aa24.76■■□□□ 1.55
HSPG2-209ENST00000480900 KIAA1210Q9ULL0 1709 aa24.74■■□□□ 1.55
HSPG2-209ENST00000480900 ORAI2Q96SN7 254 aa24.73■■□□□ 1.55
HSPG2-209ENST00000480900 LRRC59Q96AG4 307 aaKnown RBP24.71■■□□□ 1.55
HSPG2-209ENST00000480900 DDX17Q92841 729 aaKnown RBP24.7■■□□□ 1.54
HSPG2-209ENST00000480900 LRP6O75581 1613 aa24.7■■□□□ 1.54
HSPG2-209ENST00000480900 RGPD8O14715 1765 aaPredicted RBP24.7■■□□□ 1.54
HSPG2-209ENST00000480900 ADGRB2O60241 1585 aa24.69■■□□□ 1.54
HSPG2-209ENST00000480900 PRAM1Q96QH2 718 aa24.69■■□□□ 1.54
HSPG2-209ENST00000480900 RGS17Q9UGC6 210 aaPredicted RBP24.69■■□□□ 1.54
HSPG2-209ENST00000480900 SOCS7O14512 581 aa24.68■■□□□ 1.54
HSPG2-209ENST00000480900 ARHGEF28Q8N1W1 1705 aaKnown RBP24.68■■□□□ 1.54
HSPG2-209ENST00000480900 KIF1AQ12756 1690 aa24.68■■□□□ 1.54
HSPG2-209ENST00000480900 SOS2Q07890 1332 aaPredicted RBP24.67■■□□□ 1.54
HSPG2-209ENST00000480900 ESCO1Q5FWF5 840 aa24.66■■□□□ 1.54
HSPG2-209ENST00000480900 POGKQ9P215 609 aa24.66■■□□□ 1.54
HSPG2-209ENST00000480900 PNPLA6Q8IY17 1366 aa24.66■■□□□ 1.54
HSPG2-209ENST00000480900 TRIM26Q12899 539 aaPredicted RBP24.65■■□□□ 1.54
HSPG2-209ENST00000480900 TRAK1Q9UPV9 953 aa24.65■■□□□ 1.54
HSPG2-209ENST00000480900 NPHP3Q7Z494 1330 aa24.64■■□□□ 1.54
HSPG2-209ENST00000480900 SAFB2Q14151 953 aaKnown RBP eCLIP24.64■■□□□ 1.54
HSPG2-209ENST00000480900 NUTM2FA1L443 756 aa24.62■■□□□ 1.53
HSPG2-209ENST00000480900 PXDNQ92626 1479 aa24.62■■□□□ 1.53
HSPG2-209ENST00000480900 MEX3CQ5U5Q3 659 aaKnown RBP24.6■■□□□ 1.53
HSPG2-209ENST00000480900 COL22A1Q8NFW1 1626 aaPredicted RBP24.6■■□□□ 1.53
HSPG2-209ENST00000480900 USP32Q8NFA0 1604 aa24.59■■□□□ 1.53
HSPG2-209ENST00000480900 ANKARQ7Z5J8 1434 aa24.59■■□□□ 1.53
HSPG2-209ENST00000480900 NUTM2BA6NNL0 878 aaPredicted RBP24.58■■□□□ 1.53
HSPG2-209ENST00000480900 NUTM2EB1AL46 878 aaPredicted RBP24.58■■□□□ 1.53
HSPG2-209ENST00000480900 FOXO3O43524 673 aa24.58■■□□□ 1.53
HSPG2-209ENST00000480900 NUTM2AQ8IVF1 878 aaPredicted RBP24.58■■□□□ 1.53
HSPG2-209ENST00000480900 SIN3AQ96ST3 1273 aa24.57■■□□□ 1.52
HSPG2-209ENST00000480900 POTEAQ6S8J7 498 aa24.56■■□□□ 1.52
HSPG2-209ENST00000480900 L3MBTL2Q969R5 705 aa24.56■■□□□ 1.52
HSPG2-209ENST00000480900 EIF3AQ14152 1382 aaKnown RBP24.55■■□□□ 1.52
HSPG2-209ENST00000480900 MINK1Q8N4C8 1332 aaPredicted RBP24.55■■□□□ 1.52
HSPG2-209ENST00000480900 TULP4Q9NRJ4 1543 aa24.54■■□□□ 1.52
HSPG2-209ENST00000480900 HIRIP3Q9BW71 556 aaPredicted RBP24.53■■□□□ 1.52
HSPG2-209ENST00000480900 PHF8Q9UPP1 1060 aa24.53■■□□□ 1.52
HSPG2-209ENST00000480900 XPCQ01831 940 aaPredicted RBP24.52■■□□□ 1.52
HSPG2-209ENST00000480900 NEUROD1Q13562 356 aa24.52■■□□□ 1.52
HSPG2-209ENST00000480900 TRPM1Q7Z4N2 1603 aa24.52■■□□□ 1.52
HSPG2-209ENST00000480900 NBPF1Q3BBV0 1214 aa24.51■■□□□ 1.51
HSPG2-209ENST00000480900 ZNF772Q68DY9 489 aaPredicted RBP24.51■■□□□ 1.51
HSPG2-209ENST00000480900 ITSN1Q15811 1721 aa24.51■■□□□ 1.51
HSPG2-209ENST00000480900 WASLO00401 505 aaPredicted RBP24.5■■□□□ 1.51
HSPG2-209ENST00000480900 MARF1Q9Y4F3 1742 aaKnown RBP24.49■■□□□ 1.51
HSPG2-209ENST00000480900 KRT28Q7Z3Y7 464 aa24.47■■□□□ 1.51
HSPG2-209ENST00000480900 AFF2P51816 1311 aa24.46■■□□□ 1.51
HSPG2-209ENST00000480900 SPATA31A3Q5VYP0 1347 aa24.46■■□□□ 1.51
HSPG2-209ENST00000480900 PRR36Q9H6K5 1346 aa24.46■■□□□ 1.51
HSPG2-209ENST00000480900 PSME1Q06323 249 aa24.45■■□□□ 1.5
HSPG2-209ENST00000480900 TNS3Q68CZ2 1445 aa24.44■■□□□ 1.5
HSPG2-209ENST00000480900 QRICH2Q9H0J4 1663 aa24.44■■□□□ 1.5
HSPG2-209ENST00000480900 C8orf37Q96NL8 207 aa24.44■■□□□ 1.5
HSPG2-209ENST00000480900 ATP7BP35670 1465 aa24.44■■□□□ 1.5
HSPG2-209ENST00000480900 TRPM3Q9HCF6 1732 aaPredicted RBP24.44■■□□□ 1.5
HSPG2-209ENST00000480900 SBNO1A3KN83 1393 aa24.43■■□□□ 1.5
HSPG2-209ENST00000480900 ADAMTS2O95450 1211 aa24.43■■□□□ 1.5
HSPG2-209ENST00000480900 PMFBP1Q8TBY8 1022 aa24.42■■□□□ 1.5
HSPG2-209ENST00000480900 TOPAZ1Q8N9V7 1692 aa24.42■■□□□ 1.5
HSPG2-209ENST00000480900 CENPJQ9HC77 1338 aaPredicted RBP24.4■■□□□ 1.5
HSPG2-209ENST00000480900 ABCA3Q99758 1704 aa24.39■■□□□ 1.5
HSPG2-209ENST00000480900 NGLY1Q96IV0 654 aa24.39■■□□□ 1.49
HSPG2-209ENST00000480900 ALS2Q96Q42 1657 aa24.38■■□□□ 1.49
HSPG2-209ENST00000480900 CDK19Q9BWU1 502 aa24.38■■□□□ 1.49
HSPG2-209ENST00000480900 ARHGEF10O15013 1369 aa24.38■■□□□ 1.49
HSPG2-209ENST00000480900 ROCK2O75116 1388 aaKnown RBP24.38■■□□□ 1.49
HSPG2-209ENST00000480900 GPRASP1Q5JY77 1395 aa24.38■■□□□ 1.49
HSPG2-209ENST00000480900 TONSLQ96HA7 1378 aa24.38■■□□□ 1.49
HSPG2-209ENST00000480900 NUDT16Q96DE0 195 aaKnown RBP24.37■■□□□ 1.49
HSPG2-209ENST00000480900 CDK12Q9NYV4 1490 aaPredicted RBP24.35■■□□□ 1.49
HSPG2-209ENST00000480900 RXRBP28702 533 aa24.34■■□□□ 1.49
HSPG2-209ENST00000480900 NBPF8Q3BBV2 869 aa24.34■■□□□ 1.49
HSPG2-209ENST00000480900 FNBP4Q8N3X1 1017 aaPredicted RBP24.34■■□□□ 1.49
HSPG2-209ENST00000480900 NGDNQ8NEJ9 315 aaKnown RBP24.34■■□□□ 1.49
HSPG2-209ENST00000480900 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.32■■□□□ 1.48
HSPG2-209ENST00000480900 QTRT2Q9H974 415 aaKnown RBP24.32■■□□□ 1.48
HSPG2-209ENST00000480900 USP21Q9UK80 565 aa24.31■■□□□ 1.48
HSPG2-209ENST00000480900 CCDC61Q9Y6R9 512 aa24.31■■□□□ 1.48
HSPG2-209ENST00000480900 POLR3AO14802 1390 aaPredicted RBP24.3■■□□□ 1.48
HSPG2-209ENST00000480900 LMOD2Q6P5Q4 547 aa24.3■■□□□ 1.48
HSPG2-209ENST00000480900 RALGAPBQ86X10 1494 aa24.3■■□□□ 1.48
HSPG2-209ENST00000480900 CRYBG1Q9Y4K1 1723 aa24.29■■□□□ 1.48
HSPG2-209ENST00000480900 PLEKHG3A1L390 1219 aa24.28■■□□□ 1.48
HSPG2-209ENST00000480900 RBM6P78332 1123 aaKnown RBP24.28■■□□□ 1.48
HSPG2-209ENST00000480900 SRPK2P78362 688 aaKnown RBP24.28■■□□□ 1.48
HSPG2-209ENST00000480900 BCL9LQ86UU0 1499 aa24.27■■□□□ 1.48
HSPG2-209ENST00000480900 HAP1P54257 671 aaPredicted RBP24.27■■□□□ 1.48
HSPG2-209ENST00000480900 TRPC5Q9UL62 973 aaPredicted RBP24.27■■□□□ 1.48
HSPG2-209ENST00000480900 PLCH1Q4KWH8 1693 aa24.27■■□□□ 1.48
HSPG2-209ENST00000480900 NWD2Q9ULI1 1742 aa24.27■■□□□ 1.48
HSPG2-209ENST00000480900 ATRNO75882 1429 aa24.27■■□□□ 1.48
HSPG2-209ENST00000480900 CABLES1Q8TDN4 633 aa24.26■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms