RNA–Protein interactions for RNA: ENST00000480856.1

FNDC1-203, Transcript of fibronectin type III domain containing 1, humanhuman

TSL 3

Gene FNDC1, Length 789 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC1-203ENST00000480856 FAM135BQ49AJ0 1406 aa23.3■■□□□ 1.32
FNDC1-203ENST00000480856 DLC1Q96QB1 1528 aa23.28■■□□□ 1.32
FNDC1-203ENST00000480856 ARHGEF28Q8N1W1 1705 aaKnown RBP23.28■■□□□ 1.32
FNDC1-203ENST00000480856 MST1RQ04912 1400 aa23.28■■□□□ 1.32
FNDC1-203ENST00000480856 NBPF1Q3BBV0 1214 aa23.28■■□□□ 1.32
FNDC1-203ENST00000480856 TRPM1Q7Z4N2 1603 aa23.28■■□□□ 1.32
FNDC1-203ENST00000480856 CDC42BPGQ6DT37 1551 aa23.27■■□□□ 1.32
FNDC1-203ENST00000480856 PHLPP1O60346 1717 aa23.26■■□□□ 1.31
FNDC1-203ENST00000480856 NUTM2FA1L443 756 aa23.26■■□□□ 1.31
FNDC1-203ENST00000480856 SIRT1Q96EB6 747 aa23.24■■□□□ 1.31
FNDC1-203ENST00000480856 MINK1Q8N4C8 1332 aaPredicted RBP23.23■■□□□ 1.31
FNDC1-203ENST00000480856 ROCK2O75116 1388 aaKnown RBP23.23■■□□□ 1.31
FNDC1-203ENST00000480856 BRINP3Q76B58 766 aa23.22■■□□□ 1.31
FNDC1-203ENST00000480856 HIRIP3Q9BW71 556 aaPredicted RBP23.22■■□□□ 1.31
FNDC1-203ENST00000480856 C1orf167Q5SNV9 1468 aa23.22■■□□□ 1.31
FNDC1-203ENST00000480856 FMN2Q9NZ56 1722 aa23.22■■□□□ 1.31
FNDC1-203ENST00000480856 NBPF8Q3BBV2 869 aa23.21■■□□□ 1.31
FNDC1-203ENST00000480856 CLSPNQ9HAW4 1339 aa23.2■■□□□ 1.3
FNDC1-203ENST00000480856 ORAI2Q96SN7 254 aa23.17■■□□□ 1.3
FNDC1-203ENST00000480856 RGPD8O14715 1765 aaPredicted RBP23.17■■□□□ 1.3
FNDC1-203ENST00000480856 ESCO1Q5FWF5 840 aa23.16■■□□□ 1.3
FNDC1-203ENST00000480856 AHDC1Q5TGY3 1603 aaPredicted RBP23.15■■□□□ 1.3
FNDC1-203ENST00000480856 ADGRB2O60241 1585 aa23.15■■□□□ 1.3
FNDC1-203ENST00000480856 DDX17Q92841 729 aaKnown RBP23.15■■□□□ 1.3
FNDC1-203ENST00000480856 QRICH2Q9H0J4 1663 aa23.15■■□□□ 1.3
FNDC1-203ENST00000480856 NHSL1Q5SYE7 1610 aa23.15■■□□□ 1.3
FNDC1-203ENST00000480856 COL16A1Q07092 1604 aaPredicted RBP23.14■■□□□ 1.29
FNDC1-203ENST00000480856 RALGAPBQ86X10 1494 aa23.12■■□□□ 1.29
FNDC1-203ENST00000480856 CENPJQ9HC77 1338 aaPredicted RBP23.11■■□□□ 1.29
FNDC1-203ENST00000480856 CARD11Q9BXL7 1154 aa23.11■■□□□ 1.29
FNDC1-203ENST00000480856 EIF3AQ14152 1382 aaKnown RBP23.09■■□□□ 1.29
FNDC1-203ENST00000480856 WASLO00401 505 aaPredicted RBP23.08■■□□□ 1.29
FNDC1-203ENST00000480856 KIF1AQ12756 1690 aa23.08■■□□□ 1.29
FNDC1-203ENST00000480856 USP32Q8NFA0 1604 aa23.08■■□□□ 1.28
FNDC1-203ENST00000480856 GPRASP1Q5JY77 1395 aa23.06■■□□□ 1.28
FNDC1-203ENST00000480856 XPCQ01831 940 aaPredicted RBP23.06■■□□□ 1.28
FNDC1-203ENST00000480856 TULP4Q9NRJ4 1543 aa23.06■■□□□ 1.28
FNDC1-203ENST00000480856 JCADQ9P266 1359 aa23.05■■□□□ 1.28
FNDC1-203ENST00000480856 FOXO3O43524 673 aa23.05■■□□□ 1.28
FNDC1-203ENST00000480856 MED1Q15648 1581 aaPredicted RBP23.05■■□□□ 1.28
FNDC1-203ENST00000480856 TIMELESSQ9UNS1 1208 aa23.04■■□□□ 1.28
FNDC1-203ENST00000480856 PHF8Q9UPP1 1060 aa23.04■■□□□ 1.28
FNDC1-203ENST00000480856 ANKARQ7Z5J8 1434 aa23.04■■□□□ 1.28
FNDC1-203ENST00000480856 NPHP3Q7Z494 1330 aa23.04■■□□□ 1.28
FNDC1-203ENST00000480856 ITSN1Q15811 1721 aa23.03■■□□□ 1.28
FNDC1-203ENST00000480856 CDK19Q9BWU1 502 aa23.03■■□□□ 1.28
FNDC1-203ENST00000480856 SRPK2P78362 688 aaKnown RBP23.02■■□□□ 1.28
FNDC1-203ENST00000480856 PMFBP1Q8TBY8 1022 aa23.02■■□□□ 1.28
FNDC1-203ENST00000480856 DISP3Q9P2K9 1392 aa23.01■■□□□ 1.27
FNDC1-203ENST00000480856 SHPRHQ149N8 1683 aa23.01■■□□□ 1.27
FNDC1-203ENST00000480856 PRR36Q9H6K5 1346 aa23.01■■□□□ 1.27
FNDC1-203ENST00000480856 LRRC59Q96AG4 307 aaKnown RBP23■■□□□ 1.27
FNDC1-203ENST00000480856 ATP7BP35670 1465 aa22.98■■□□□ 1.27
FNDC1-203ENST00000480856 NUDT16Q96DE0 195 aaKnown RBP22.98■■□□□ 1.27
FNDC1-203ENST00000480856 NUTM2BA6NNL0 878 aaPredicted RBP22.97■■□□□ 1.27
FNDC1-203ENST00000480856 NUTM2EB1AL46 878 aaPredicted RBP22.97■■□□□ 1.27
FNDC1-203ENST00000480856 NUTM2AQ8IVF1 878 aaPredicted RBP22.97■■□□□ 1.27
FNDC1-203ENST00000480856 CABP2Q9NPB3 220 aa22.97■■□□□ 1.27
FNDC1-203ENST00000480856 SOS2Q07890 1332 aaPredicted RBP22.97■■□□□ 1.27
FNDC1-203ENST00000480856 PXDNQ92626 1479 aa22.97■■□□□ 1.27
FNDC1-203ENST00000480856 PHF23Q9BUL5 403 aaPredicted RBP22.96■■□□□ 1.27
FNDC1-203ENST00000480856 EVC2Q86UK5 1308 aa22.96■■□□□ 1.27
FNDC1-203ENST00000480856 PSME1Q06323 249 aa22.95■■□□□ 1.26
FNDC1-203ENST00000480856 KRT28Q7Z3Y7 464 aa22.95■■□□□ 1.26
FNDC1-203ENST00000480856 TOPAZ1Q8N9V7 1692 aa22.95■■□□□ 1.26
FNDC1-203ENST00000480856 NGDNQ8NEJ9 315 aaKnown RBP22.95■■□□□ 1.26
FNDC1-203ENST00000480856 PNPLA6Q8IY17 1366 aa22.93■■□□□ 1.26
FNDC1-203ENST00000480856 SPATA31A6Q5VVP1 1343 aa22.93■■□□□ 1.26
FNDC1-203ENST00000480856 MEX3CQ5U5Q3 659 aaKnown RBP22.93■■□□□ 1.26
FNDC1-203ENST00000480856 PLEKHG5O94827 1062 aa22.92■■□□□ 1.26
FNDC1-203ENST00000480856 LMOD2Q6P5Q4 547 aa22.92■■□□□ 1.26
FNDC1-203ENST00000480856 CCDC61Q9Y6R9 512 aa22.91■■□□□ 1.26
FNDC1-203ENST00000480856 USP47Q96K76 1375 aa22.9■■□□□ 1.26
FNDC1-203ENST00000480856 PPIP5K1Q6PFW1 1433 aa22.9■■□□□ 1.26
FNDC1-203ENST00000480856 LRP6O75581 1613 aa22.9■■□□□ 1.26
FNDC1-203ENST00000480856 ST20-MTHFSA0A0A6YYL1 179 aa22.89■■□□□ 1.25
FNDC1-203ENST00000480856 PAK3O75914 559 aaPredicted RBP22.87■■□□□ 1.25
FNDC1-203ENST00000480856 SBNO2Q9Y2G9 1366 aa22.87■■□□□ 1.25
FNDC1-203ENST00000480856 TNS3Q68CZ2 1445 aa22.86■■□□□ 1.25
FNDC1-203ENST00000480856 TRPM3Q9HCF6 1732 aaPredicted RBP22.85■■□□□ 1.25
FNDC1-203ENST00000480856 ACEP12821 1306 aa22.85■■□□□ 1.25
FNDC1-203ENST00000480856 SPATA31A3Q5VYP0 1347 aa22.85■■□□□ 1.25
FNDC1-203ENST00000480856 COL22A1Q8NFW1 1626 aaPredicted RBP22.85■■□□□ 1.25
FNDC1-203ENST00000480856 ADAMTS2O95450 1211 aa22.84■■□□□ 1.25
FNDC1-203ENST00000480856 HAP1P54257 671 aaPredicted RBP22.83■■□□□ 1.25
FNDC1-203ENST00000480856 CABP1Q9NZU7 370 aa22.83■■□□□ 1.25
FNDC1-203ENST00000480856 SBNO1A3KN83 1393 aa22.83■■□□□ 1.25
FNDC1-203ENST00000480856 ATAD2Q6PL18 1390 aa22.82■■□□□ 1.24
FNDC1-203ENST00000480856 PLEKHG3A1L390 1219 aa22.81■■□□□ 1.24
FNDC1-203ENST00000480856 POLR3AO14802 1390 aaPredicted RBP22.8■■□□□ 1.24
FNDC1-203ENST00000480856 ARHGEF10O15013 1369 aa22.8■■□□□ 1.24
FNDC1-203ENST00000480856 ALS2Q96Q42 1657 aa22.8■■□□□ 1.24
FNDC1-203ENST00000480856 TMC1Q8TDI8 760 aa22.79■■□□□ 1.24
FNDC1-203ENST00000480856 C8orf37Q96NL8 207 aa22.79■■□□□ 1.24
FNDC1-203ENST00000480856 TESK2Q96S53 571 aa22.79■■□□□ 1.24
FNDC1-203ENST00000480856 CABLES1Q8TDN4 633 aa22.78■■□□□ 1.24
FNDC1-203ENST00000480856 ABCA3Q99758 1704 aa22.77■■□□□ 1.23
FNDC1-203ENST00000480856 TMF1P82094 1093 aa22.76■■□□□ 1.23
FNDC1-203ENST00000480856 MARF1Q9Y4F3 1742 aaKnown RBP22.76■■□□□ 1.23
FNDC1-203ENST00000480856 AKAP12Q02952 1782 aa22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms