RNA–Protein interactions for RNA: ENST00000480185.1

MMP11-209, Transcript of matrix metallopeptidase 11, humanhuman

TSL 2

Gene MMP11, Length 370 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11-209ENST00000480185 CDC42BPGQ6DT37 1551 aa19.52■□□□□ 0.71
MMP11-209ENST00000480185 KDM2AQ9Y2K7 1162 aa19.51■□□□□ 0.71
MMP11-209ENST00000480185 PLEKHH1Q9ULM0 1364 aa19.51■□□□□ 0.71
MMP11-209ENST00000480185 LRRC59Q96AG4 307 aaKnown RBP19.5■□□□□ 0.71
MMP11-209ENST00000480185 ORAI2Q96SN7 254 aa19.5■□□□□ 0.71
MMP11-209ENST00000480185 KNDC1Q76NI1 1749 aa19.5■□□□□ 0.71
MMP11-209ENST00000480185 DDX17Q92841 729 aaKnown RBP19.49■□□□□ 0.71
MMP11-209ENST00000480185 NHSL1Q5SYE7 1610 aa19.48■□□□□ 0.71
MMP11-209ENST00000480185 ADGRB1O14514 1584 aa19.46■□□□□ 0.71
MMP11-209ENST00000480185 PRAM1Q96QH2 718 aa19.46■□□□□ 0.71
MMP11-209ENST00000480185 SHPRHQ149N8 1683 aa19.46■□□□□ 0.71
MMP11-209ENST00000480185 LRP6O75581 1613 aa19.45■□□□□ 0.7
MMP11-209ENST00000480185 ESCO1Q5FWF5 840 aa19.45■□□□□ 0.7
MMP11-209ENST00000480185 SOS2Q07890 1332 aaPredicted RBP19.45■□□□□ 0.7
MMP11-209ENST00000480185 DLC1Q96QB1 1528 aa19.45■□□□□ 0.7
MMP11-209ENST00000480185 MEX3CQ5U5Q3 659 aaKnown RBP19.42■□□□□ 0.7
MMP11-209ENST00000480185 POGKQ9P215 609 aa19.42■□□□□ 0.7
MMP11-209ENST00000480185 NPHP3Q7Z494 1330 aa19.42■□□□□ 0.7
MMP11-209ENST00000480185 PNPLA6Q8IY17 1366 aa19.42■□□□□ 0.7
MMP11-209ENST00000480185 NUTM2FA1L443 756 aa19.41■□□□□ 0.7
MMP11-209ENST00000480185 POTEAQ6S8J7 498 aa19.41■□□□□ 0.7
MMP11-209ENST00000480185 TRAK1Q9UPV9 953 aa19.41■□□□□ 0.7
MMP11-209ENST00000480185 NUTM2BA6NNL0 878 aaPredicted RBP19.4■□□□□ 0.7
MMP11-209ENST00000480185 NUTM2EB1AL46 878 aaPredicted RBP19.4■□□□□ 0.7
MMP11-209ENST00000480185 SAFB2Q14151 953 aaKnown RBP eCLIP19.4■□□□□ 0.7
MMP11-209ENST00000480185 NUTM2AQ8IVF1 878 aaPredicted RBP19.4■□□□□ 0.7
MMP11-209ENST00000480185 FOXO3O43524 673 aa19.39■□□□□ 0.69
MMP11-209ENST00000480185 FMN2Q9NZ56 1722 aa19.37■□□□□ 0.69
MMP11-209ENST00000480185 PXDNQ92626 1479 aa19.35■□□□□ 0.69
MMP11-209ENST00000480185 ZNF772Q68DY9 489 aaPredicted RBP19.35■□□□□ 0.69
MMP11-209ENST00000480185 ADGRB2O60241 1585 aa19.33■□□□□ 0.69
MMP11-209ENST00000480185 XPCQ01831 940 aaPredicted RBP19.33■□□□□ 0.68
MMP11-209ENST00000480185 TRIM26Q12899 539 aaPredicted RBP19.33■□□□□ 0.68
MMP11-209ENST00000480185 PHF8Q9UPP1 1060 aa19.33■□□□□ 0.68
MMP11-209ENST00000480185 ANKARQ7Z5J8 1434 aa19.33■□□□□ 0.68
MMP11-209ENST00000480185 MINK1Q8N4C8 1332 aaPredicted RBP19.32■□□□□ 0.68
MMP11-209ENST00000480185 L3MBTL2Q969R5 705 aa19.32■□□□□ 0.68
MMP11-209ENST00000480185 SIN3AQ96ST3 1273 aa19.32■□□□□ 0.68
MMP11-209ENST00000480185 HIRIP3Q9BW71 556 aaPredicted RBP19.32■□□□□ 0.68
MMP11-209ENST00000480185 EIF3AQ14152 1382 aaKnown RBP19.31■□□□□ 0.68
MMP11-209ENST00000480185 KIF1AQ12756 1690 aa19.3■□□□□ 0.68
MMP11-209ENST00000480185 WASLO00401 505 aaPredicted RBP19.3■□□□□ 0.68
MMP11-209ENST00000480185 AFF2P51816 1311 aa19.29■□□□□ 0.68
MMP11-209ENST00000480185 NBPF1Q3BBV0 1214 aa19.29■□□□□ 0.68
MMP11-209ENST00000480185 KRT28Q7Z3Y7 464 aa19.29■□□□□ 0.68
MMP11-209ENST00000480185 C8orf37Q96NL8 207 aa19.29■□□□□ 0.68
MMP11-209ENST00000480185 KIAA1210Q9ULL0 1709 aa19.28■□□□□ 0.68
MMP11-209ENST00000480185 ADAMTS2O95450 1211 aa19.28■□□□□ 0.68
MMP11-209ENST00000480185 NEUROD1Q13562 356 aa19.28■□□□□ 0.68
MMP11-209ENST00000480185 SPATA31A3Q5VYP0 1347 aa19.27■□□□□ 0.68
MMP11-209ENST00000480185 COL22A1Q8NFW1 1626 aaPredicted RBP19.27■□□□□ 0.68
MMP11-209ENST00000480185 PSME1Q06323 249 aa19.27■□□□□ 0.68
MMP11-209ENST00000480185 NGLY1Q96IV0 654 aa19.26■□□□□ 0.67
MMP11-209ENST00000480185 PRR36Q9H6K5 1346 aa19.25■□□□□ 0.67
MMP11-209ENST00000480185 TULP4Q9NRJ4 1543 aa19.25■□□□□ 0.67
MMP11-209ENST00000480185 ARHGEF28Q8N1W1 1705 aaKnown RBP19.25■□□□□ 0.67
MMP11-209ENST00000480185 SBNO1A3KN83 1393 aa19.24■□□□□ 0.67
MMP11-209ENST00000480185 PMFBP1Q8TBY8 1022 aa19.24■□□□□ 0.67
MMP11-209ENST00000480185 USP32Q8NFA0 1604 aa19.24■□□□□ 0.67
MMP11-209ENST00000480185 RXRBP28702 533 aa19.23■□□□□ 0.67
MMP11-209ENST00000480185 TNS3Q68CZ2 1445 aa19.23■□□□□ 0.67
MMP11-209ENST00000480185 FNBP4Q8N3X1 1017 aaPredicted RBP19.22■□□□□ 0.67
MMP11-209ENST00000480185 RGPD8O14715 1765 aaPredicted RBP19.2■□□□□ 0.66
MMP11-209ENST00000480185 NUDT16Q96DE0 195 aaKnown RBP19.2■□□□□ 0.66
MMP11-209ENST00000480185 CDK19Q9BWU1 502 aa19.2■□□□□ 0.66
MMP11-209ENST00000480185 QTRT2Q9H974 415 aaKnown RBP19.2■□□□□ 0.66
MMP11-209ENST00000480185 CENPJQ9HC77 1338 aaPredicted RBP19.2■□□□□ 0.66
MMP11-209ENST00000480185 ARHGEF10O15013 1369 aa19.19■□□□□ 0.66
MMP11-209ENST00000480185 GPRASP1Q5JY77 1395 aa19.19■□□□□ 0.66
MMP11-209ENST00000480185 USP21Q9UK80 565 aa19.19■□□□□ 0.66
MMP11-209ENST00000480185 ATP7BP35670 1465 aa19.19■□□□□ 0.66
MMP11-209ENST00000480185 CDK12Q9NYV4 1490 aaPredicted RBP19.18■□□□□ 0.66
MMP11-209ENST00000480185 RBM6P78332 1123 aaKnown RBP19.18■□□□□ 0.66
MMP11-209ENST00000480185 NGDNQ8NEJ9 315 aaKnown RBP19.17■□□□□ 0.66
MMP11-209ENST00000480185 LMOD2Q6P5Q4 547 aa19.16■□□□□ 0.66
MMP11-209ENST00000480185 CCDC61Q9Y6R9 512 aa19.16■□□□□ 0.66
MMP11-209ENST00000480185 ROCK2O75116 1388 aaKnown RBP19.16■□□□□ 0.66
MMP11-209ENST00000480185 TRPC5Q9UL62 973 aaPredicted RBP19.15■□□□□ 0.66
MMP11-209ENST00000480185 HAP1P54257 671 aaPredicted RBP19.14■□□□□ 0.65
MMP11-209ENST00000480185 CABLES1Q8TDN4 633 aa19.14■□□□□ 0.65
MMP11-209ENST00000480185 NBPF8Q3BBV2 869 aa19.13■□□□□ 0.65
MMP11-209ENST00000480185 TONSLQ96HA7 1378 aa19.13■□□□□ 0.65
MMP11-209ENST00000480185 BCL9LQ86UU0 1499 aa19.13■□□□□ 0.65
MMP11-209ENST00000480185 TRPM1Q7Z4N2 1603 aa19.13■□□□□ 0.65
MMP11-209ENST00000480185 ATRNO75882 1429 aa19.12■□□□□ 0.65
MMP11-209ENST00000480185 PLEKHG3A1L390 1219 aa19.12■□□□□ 0.65
MMP11-209ENST00000480185 SRPK2P78362 688 aaKnown RBP19.12■□□□□ 0.65
MMP11-209ENST00000480185 POLR3AO14802 1390 aaPredicted RBP19.11■□□□□ 0.65
MMP11-209ENST00000480185 PLEKHG5O94827 1062 aa19.1■□□□□ 0.65
MMP11-209ENST00000480185 TRPM3Q9HCF6 1732 aaPredicted RBP19.1■□□□□ 0.65
MMP11-209ENST00000480185 SLIT2O94813 1529 aa19.1■□□□□ 0.65
MMP11-209ENST00000480185 RGS12O14924 1447 aa19.09■□□□□ 0.65
MMP11-209ENST00000480185 ITSN1Q15811 1721 aa19.09■□□□□ 0.65
MMP11-209ENST00000480185 ACEP12821 1306 aa19.09■□□□□ 0.65
MMP11-209ENST00000480185 PAK3O75914 559 aaPredicted RBP19.09■□□□□ 0.65
MMP11-209ENST00000480185 CABP2Q9NPB3 220 aa19.09■□□□□ 0.65
MMP11-209ENST00000480185 UNC5CLQ8IV45 518 aa19.08■□□□□ 0.64
MMP11-209ENST00000480185 MARF1Q9Y4F3 1742 aaKnown RBP19.07■□□□□ 0.64
MMP11-209ENST00000480185 TOPAZ1Q8N9V7 1692 aa19.07■□□□□ 0.64
MMP11-209ENST00000480185 EVC2Q86UK5 1308 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms