RNA–Protein interactions for RNA: ENST00000479913.1

RET-203, Transcript of ret proto-oncogene, humanhuman

TSL 4

Gene RET, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RET-203ENST00000479913 NBPF8Q3BBV2 869 aa26.82■■□□□ 1.88
RET-203ENST00000479913 MST1RQ04912 1400 aa26.82■■□□□ 1.88
RET-203ENST00000479913 DLC1Q96QB1 1528 aa26.81■■□□□ 1.88
RET-203ENST00000479913 TONSLQ96HA7 1378 aa26.81■■□□□ 1.88
RET-203ENST00000479913 KIAA1210Q9ULL0 1709 aa26.79■■□□□ 1.88
RET-203ENST00000479913 CLSPNQ9HAW4 1339 aa26.79■■□□□ 1.88
RET-203ENST00000479913 SAFB2Q14151 953 aaKnown RBP eCLIP26.78■■□□□ 1.88
RET-203ENST00000479913 ROBO1Q9Y6N7 1651 aa26.77■■□□□ 1.88
RET-203ENST00000479913 BRINP3Q76B58 766 aa26.77■■□□□ 1.88
RET-203ENST00000479913 POGKQ9P215 609 aa26.77■■□□□ 1.88
RET-203ENST00000479913 C1orf167Q5SNV9 1468 aa26.74■■□□□ 1.87
RET-203ENST00000479913 CCER1Q8TC90 406 aaPredicted RBP26.72■■□□□ 1.87
RET-203ENST00000479913 CDC42BPGQ6DT37 1551 aa26.71■■□□□ 1.87
RET-203ENST00000479913 ORAI2Q96SN7 254 aa26.7■■□□□ 1.86
RET-203ENST00000479913 TRPM1Q7Z4N2 1603 aa26.69■■□□□ 1.86
RET-203ENST00000479913 MINK1Q8N4C8 1332 aaPredicted RBP26.68■■□□□ 1.86
RET-203ENST00000479913 NUTM2FA1L443 756 aa26.68■■□□□ 1.86
RET-203ENST00000479913 HIRIP3Q9BW71 556 aaPredicted RBP26.67■■□□□ 1.86
RET-203ENST00000479913 ARHGEF28Q8N1W1 1705 aaKnown RBP26.66■■□□□ 1.86
RET-203ENST00000479913 ROCK2O75116 1388 aaKnown RBP26.66■■□□□ 1.86
RET-203ENST00000479913 GPRASP1Q5JY77 1395 aa26.64■■□□□ 1.86
RET-203ENST00000479913 DDX17Q92841 729 aaKnown RBP26.64■■□□□ 1.86
RET-203ENST00000479913 TIMELESSQ9UNS1 1208 aa26.64■■□□□ 1.86
RET-203ENST00000479913 ESCO1Q5FWF5 840 aa26.62■■□□□ 1.85
RET-203ENST00000479913 AHDC1Q5TGY3 1603 aaPredicted RBP26.61■■□□□ 1.85
RET-203ENST00000479913 WASLO00401 505 aaPredicted RBP26.61■■□□□ 1.85
RET-203ENST00000479913 ADGRB2O60241 1585 aa26.61■■□□□ 1.85
RET-203ENST00000479913 FMN2Q9NZ56 1722 aa26.6■■□□□ 1.85
RET-203ENST00000479913 MED1Q15648 1581 aaPredicted RBP26.6■■□□□ 1.85
RET-203ENST00000479913 RALGAPBQ86X10 1494 aa26.6■■□□□ 1.85
RET-203ENST00000479913 CENPJQ9HC77 1338 aaPredicted RBP26.59■■□□□ 1.85
RET-203ENST00000479913 PHLPP1O60346 1717 aa26.59■■□□□ 1.85
RET-203ENST00000479913 CARD11Q9BXL7 1154 aa26.57■■□□□ 1.84
RET-203ENST00000479913 COL16A1Q07092 1604 aaPredicted RBP26.57■■□□□ 1.84
RET-203ENST00000479913 PRR36Q9H6K5 1346 aa26.56■■□□□ 1.84
RET-203ENST00000479913 NHSL1Q5SYE7 1610 aa26.54■■□□□ 1.84
RET-203ENST00000479913 CDK19Q9BWU1 502 aa26.54■■□□□ 1.84
RET-203ENST00000479913 ANKARQ7Z5J8 1434 aa26.54■■□□□ 1.84
RET-203ENST00000479913 FOXO3O43524 673 aa26.53■■□□□ 1.84
RET-203ENST00000479913 SOS2Q07890 1332 aaPredicted RBP26.53■■□□□ 1.84
RET-203ENST00000479913 PHF8Q9UPP1 1060 aa26.52■■□□□ 1.84
RET-203ENST00000479913 USP32Q8NFA0 1604 aa26.51■■□□□ 1.83
RET-203ENST00000479913 JCADQ9P266 1359 aa26.51■■□□□ 1.83
RET-203ENST00000479913 TULP4Q9NRJ4 1543 aa26.49■■□□□ 1.83
RET-203ENST00000479913 LRRC59Q96AG4 307 aaKnown RBP26.49■■□□□ 1.83
RET-203ENST00000479913 NUDT16Q96DE0 195 aaKnown RBP26.49■■□□□ 1.83
RET-203ENST00000479913 RGPD8O14715 1765 aaPredicted RBP26.48■■□□□ 1.83
RET-203ENST00000479913 EIF3AQ14152 1382 aaKnown RBP26.48■■□□□ 1.83
RET-203ENST00000479913 NPHP3Q7Z494 1330 aa26.48■■□□□ 1.83
RET-203ENST00000479913 XPCQ01831 940 aaPredicted RBP26.47■■□□□ 1.83
RET-203ENST00000479913 PMFBP1Q8TBY8 1022 aa26.47■■□□□ 1.83
RET-203ENST00000479913 PXDNQ92626 1479 aa26.45■■□□□ 1.82
RET-203ENST00000479913 QRICH2Q9H0J4 1663 aa26.44■■□□□ 1.82
RET-203ENST00000479913 ATP7BP35670 1465 aa26.44■■□□□ 1.82
RET-203ENST00000479913 KRT28Q7Z3Y7 464 aa26.43■■□□□ 1.82
RET-203ENST00000479913 CABP2Q9NPB3 220 aa26.43■■□□□ 1.82
RET-203ENST00000479913 KIF1AQ12756 1690 aa26.41■■□□□ 1.82
RET-203ENST00000479913 PNPLA6Q8IY17 1366 aa26.41■■□□□ 1.82
RET-203ENST00000479913 SRPK2P78362 688 aaKnown RBP26.4■■□□□ 1.82
RET-203ENST00000479913 CCDC61Q9Y6R9 512 aa26.4■■□□□ 1.82
RET-203ENST00000479913 EVC2Q86UK5 1308 aa26.39■■□□□ 1.82
RET-203ENST00000479913 SBNO2Q9Y2G9 1366 aa26.39■■□□□ 1.82
RET-203ENST00000479913 SPATA31A6Q5VVP1 1343 aa26.39■■□□□ 1.81
RET-203ENST00000479913 ST20-MTHFSA0A0A6YYL1 179 aa26.38■■□□□ 1.81
RET-203ENST00000479913 PLEKHG3A1L390 1219 aa26.38■■□□□ 1.81
RET-203ENST00000479913 PSME1Q06323 249 aa26.38■■□□□ 1.81
RET-203ENST00000479913 SHPRHQ149N8 1683 aa26.38■■□□□ 1.81
RET-203ENST00000479913 TESK2Q96S53 571 aa26.36■■□□□ 1.81
RET-203ENST00000479913 SPATA31A3Q5VYP0 1347 aa26.36■■□□□ 1.81
RET-203ENST00000479913 NGDNQ8NEJ9 315 aaKnown RBP26.35■■□□□ 1.81
RET-203ENST00000479913 PHF23Q9BUL5 403 aaPredicted RBP26.34■■□□□ 1.81
RET-203ENST00000479913 LRP6O75581 1613 aa26.34■■□□□ 1.81
RET-203ENST00000479913 SBNO1A3KN83 1393 aa26.33■■□□□ 1.8
RET-203ENST00000479913 USP47Q96K76 1375 aa26.33■■□□□ 1.8
RET-203ENST00000479913 NUTM2BA6NNL0 878 aaPredicted RBP26.32■■□□□ 1.8
RET-203ENST00000479913 NUTM2EB1AL46 878 aaPredicted RBP26.32■■□□□ 1.8
RET-203ENST00000479913 NUTM2AQ8IVF1 878 aaPredicted RBP26.32■■□□□ 1.8
RET-203ENST00000479913 ACEP12821 1306 aa26.32■■□□□ 1.8
RET-203ENST00000479913 POLR3AO14802 1390 aaPredicted RBP26.32■■□□□ 1.8
RET-203ENST00000479913 CABP1Q9NZU7 370 aa26.31■■□□□ 1.8
RET-203ENST00000479913 TOPAZ1Q8N9V7 1692 aa26.31■■□□□ 1.8
RET-203ENST00000479913 PPIP5K1Q6PFW1 1433 aa26.31■■□□□ 1.8
RET-203ENST00000479913 RGS17Q9UGC6 210 aaPredicted RBP26.29■■□□□ 1.8
RET-203ENST00000479913 ITSN1Q15811 1721 aa26.28■■□□□ 1.8
RET-203ENST00000479913 TNS3Q68CZ2 1445 aa26.27■■□□□ 1.8
RET-203ENST00000479913 COL22A1Q8NFW1 1626 aaPredicted RBP26.25■■□□□ 1.79
RET-203ENST00000479913 ATAD2Q6PL18 1390 aa26.24■■□□□ 1.79
RET-203ENST00000479913 PUS7Q96PZ0 661 aaKnown RBP26.24■■□□□ 1.79
RET-203ENST00000479913 TRPM3Q9HCF6 1732 aaPredicted RBP26.24■■□□□ 1.79
RET-203ENST00000479913 SLC24A1O60721 1099 aa26.22■■□□□ 1.79
RET-203ENST00000479913 LMOD2Q6P5Q4 547 aa26.22■■□□□ 1.79
RET-203ENST00000479913 PAK3O75914 559 aaPredicted RBP26.21■■□□□ 1.79
RET-203ENST00000479913 MEX3CQ5U5Q3 659 aaKnown RBP26.21■■□□□ 1.79
RET-203ENST00000479913 ARHGEF10O15013 1369 aa26.2■■□□□ 1.79
RET-203ENST00000479913 ADAMTS2O95450 1211 aa26.2■■□□□ 1.78
RET-203ENST00000479913 CABLES1Q8TDN4 633 aa26.2■■□□□ 1.78
RET-203ENST00000479913 TMF1P82094 1093 aa26.17■■□□□ 1.78
RET-203ENST00000479913 SLC12A5Q9H2X9 1139 aa26.17■■□□□ 1.78
RET-203ENST00000479913 ALS2Q96Q42 1657 aa26.16■■□□□ 1.78
RET-203ENST00000479913 HSPA5P11021 654 aaKnown RBP26.16■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms