RNA–Protein interactions for RNA: ENST00000479539.1

SP140-210, Transcript of SP140 nuclear body protein, humanhuman

TSL 5

Gene SP140, Length 550 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-210ENST00000479539 C1orf167Q5SNV9 1468 aa15.29■□□□□ 0.04
SP140-210ENST00000479539 JCADQ9P266 1359 aa15.29■□□□□ 0.04
SP140-210ENST00000479539 ILDR2Q71H61 639 aa15.28■□□□□ 0.04
SP140-210ENST00000479539 ORAI2Q96SN7 254 aa15.28■□□□□ 0.04
SP140-210ENST00000479539 PRAM1Q96QH2 718 aa15.27■□□□□ 0.04
SP140-210ENST00000479539 SIN3AQ96ST3 1273 aa15.27■□□□□ 0.04
SP140-210ENST00000479539 AHDC1Q5TGY3 1603 aaPredicted RBP15.25■□□□□ 0.03
SP140-210ENST00000479539 ADGRB1O14514 1584 aa15.25■□□□□ 0.03
SP140-210ENST00000479539 MED1Q15648 1581 aaPredicted RBP15.25■□□□□ 0.03
SP140-210ENST00000479539 DDX17Q92841 729 aaKnown RBP15.25■□□□□ 0.03
SP140-210ENST00000479539 L3MBTL2Q969R5 705 aa15.25■□□□□ 0.03
SP140-210ENST00000479539 LRRC59Q96AG4 307 aaKnown RBP15.25■□□□□ 0.03
SP140-210ENST00000479539 POGKQ9P215 609 aa15.25■□□□□ 0.03
SP140-210ENST00000479539 TRAK1Q9UPV9 953 aa15.25■□□□□ 0.03
SP140-210ENST00000479539 ESCO1Q5FWF5 840 aa15.24■□□□□ 0.03
SP140-210ENST00000479539 SPATA31A6Q5VVP1 1343 aa15.23■□□□□ 0.03
SP140-210ENST00000479539 NALCNQ8IZF0 1738 aa15.23■□□□□ 0.03
SP140-210ENST00000479539 SOS2Q07890 1332 aaPredicted RBP15.22■□□□□ 0.03
SP140-210ENST00000479539 NEUROD1Q13562 356 aa15.22■□□□□ 0.03
SP140-210ENST00000479539 SAFB2Q14151 953 aaKnown RBP eCLIP15.22■□□□□ 0.03
SP140-210ENST00000479539 RGS17Q9UGC6 210 aaPredicted RBP15.22■□□□□ 0.03
SP140-210ENST00000479539 DLC1Q96QB1 1528 aa15.22■□□□□ 0.03
SP140-210ENST00000479539 LAMC1P11047 1609 aa15.21■□□□□ 0.03
SP140-210ENST00000479539 COL16A1Q07092 1604 aaPredicted RBP15.21■□□□□ 0.03
SP140-210ENST00000479539 CDC42BPGQ6DT37 1551 aa15.21■□□□□ 0.03
SP140-210ENST00000479539 NUTM2FA1L443 756 aa15.21■□□□□ 0.03
SP140-210ENST00000479539 NBPF1Q3BBV0 1214 aa15.2■□□□□ 0.02
SP140-210ENST00000479539 FOXO3O43524 673 aa15.19■□□□□ 0.02
SP140-210ENST00000479539 PHLPP1O60346 1717 aa15.19■□□□□ 0.02
SP140-210ENST00000479539 KNDC1Q76NI1 1749 aa15.19■□□□□ 0.02
SP140-210ENST00000479539 NPHP3Q7Z494 1330 aa15.18■□□□□ 0.02
SP140-210ENST00000479539 NPM3O75607 178 aaKnown RBP15.17■□□□□ 0.02
SP140-210ENST00000479539 MINK1Q8N4C8 1332 aaPredicted RBP15.17■□□□□ 0.02
SP140-210ENST00000479539 PNPLA6Q8IY17 1366 aa15.16■□□□□ 0.02
SP140-210ENST00000479539 WASLO00401 505 aaPredicted RBP15.16■□□□□ 0.02
SP140-210ENST00000479539 HIRIP3Q9BW71 556 aaPredicted RBP15.16■□□□□ 0.02
SP140-210ENST00000479539 CACNB1Q02641 598 aaPredicted RBP15.15■□□□□ 0.02
SP140-210ENST00000479539 PHF8Q9UPP1 1060 aa15.15■□□□□ 0.02
SP140-210ENST00000479539 NUTM2BA6NNL0 878 aaPredicted RBP15.14■□□□□ 0.01
SP140-210ENST00000479539 NUTM2EB1AL46 878 aaPredicted RBP15.14■□□□□ 0.01
SP140-210ENST00000479539 SOCS7O14512 581 aa15.14■□□□□ 0.01
SP140-210ENST00000479539 NUTM2AQ8IVF1 878 aaPredicted RBP15.14■□□□□ 0.01
SP140-210ENST00000479539 ANKARQ7Z5J8 1434 aa15.14■□□□□ 0.01
SP140-210ENST00000479539 LRP6O75581 1613 aa15.14■□□□□ 0.01
SP140-210ENST00000479539 NHSL1Q5SYE7 1610 aa15.13■□□□□ 0.01
SP140-210ENST00000479539 XPCQ01831 940 aaPredicted RBP15.12■□□□□ 0.01
SP140-210ENST00000479539 MEX3CQ5U5Q3 659 aaKnown RBP15.12■□□□□ 0.01
SP140-210ENST00000479539 POTEAQ6S8J7 498 aa15.12■□□□□ 0.01
SP140-210ENST00000479539 KRT28Q7Z3Y7 464 aa15.12■□□□□ 0.01
SP140-210ENST00000479539 EIF3AQ14152 1382 aaKnown RBP15.11■□□□□ 0.01
SP140-210ENST00000479539 RNF216Q9NWF9 866 aaPredicted RBP15.11■□□□□ 0.01
SP140-210ENST00000479539 PXDNQ92626 1479 aa15.11■□□□□ 0.01
SP140-210ENST00000479539 PRR36Q9H6K5 1346 aa15.11■□□□□ 0.01
SP140-210ENST00000479539 NBPF8Q3BBV2 869 aa15.1■□□□□ 0.01
SP140-210ENST00000479539 SPATA31A3Q5VYP0 1347 aa15.1■□□□□ 0.01
SP140-210ENST00000479539 PSME1Q06323 249 aa15.09■□□□□ 0.01
SP140-210ENST00000479539 ZNF772Q68DY9 489 aaPredicted RBP15.09■□□□□ 0.01
SP140-210ENST00000479539 PMFBP1Q8TBY8 1022 aa15.09■□□□□ 0.01
SP140-210ENST00000479539 CDK19Q9BWU1 502 aa15.09■□□□□ 0.01
SP140-210ENST00000479539 ADGRB2O60241 1585 aa15.09■□□□□ 0.01
SP140-210ENST00000479539 CENPJQ9HC77 1338 aaPredicted RBP15.09■□□□□ 0.01
SP140-210ENST00000479539 SHPRHQ149N8 1683 aa15.09■□□□□ 0.01
SP140-210ENST00000479539 NUDT16Q96DE0 195 aaKnown RBP15.08■□□□□ 0
SP140-210ENST00000479539 FMN2Q9NZ56 1722 aa15.08■□□□□ 0
SP140-210ENST00000479539 KIAA1210Q9ULL0 1709 aa15.08■□□□□ 0
SP140-210ENST00000479539 PCGF6Q9BYE7 350 aa15.07■□□□□ 0
SP140-210ENST00000479539 TONSLQ96HA7 1378 aa15.07■□□□□ 0
SP140-210ENST00000479539 ADAMTS2O95450 1211 aa15.06■□□□□ 0
SP140-210ENST00000479539 HOXD11P31277 338 aaPredicted RBP15.06■□□□□ 0
SP140-210ENST00000479539 SBNO1A3KN83 1393 aa15.06■□□□□ 0
SP140-210ENST00000479539 ROCK2O75116 1388 aaKnown RBP15.06■□□□□ 0
SP140-210ENST00000479539 GPRASP1Q5JY77 1395 aa15.06■□□□□ 0
SP140-210ENST00000479539 C8orf37Q96NL8 207 aa15.05■□□□□ -0
SP140-210ENST00000479539 CCDC61Q9Y6R9 512 aa15.05■□□□□ -0
SP140-210ENST00000479539 TULP4Q9NRJ4 1543 aa15.05■□□□□ -0
SP140-210ENST00000479539 AFF2P51816 1311 aa15.04■□□□□ -0
SP140-210ENST00000479539 NGDNQ8NEJ9 315 aaKnown RBP15.04■□□□□ -0
SP140-210ENST00000479539 NGLY1Q96IV0 654 aa15.04■□□□□ -0
SP140-210ENST00000479539 PLEKHG3A1L390 1219 aa15.03■□□□□ -0
SP140-210ENST00000479539 FNBP4Q8N3X1 1017 aaPredicted RBP15.03■□□□□ -0
SP140-210ENST00000479539 CARD11Q9BXL7 1154 aa15.02■□□□□ -0
SP140-210ENST00000479539 KIF1AQ12756 1690 aa15.02□□□□□ -0.01
SP140-210ENST00000479539 ATP7BP35670 1465 aa15.01□□□□□ -0.01
SP140-210ENST00000479539 TNS3Q68CZ2 1445 aa15.01□□□□□ -0.01
SP140-210ENST00000479539 ARHGEF28Q8N1W1 1705 aaKnown RBP15.01□□□□□ -0.01
SP140-210ENST00000479539 CLSPNQ9HAW4 1339 aa15.01□□□□□ -0.01
SP140-210ENST00000479539 SRPK2P78362 688 aaKnown RBP15.01□□□□□ -0.01
SP140-210ENST00000479539 USP32Q8NFA0 1604 aa15.01□□□□□ -0.01
SP140-210ENST00000479539 ARHGEF10O15013 1369 aa15□□□□□ -0.01
SP140-210ENST00000479539 RXRBP28702 533 aa15□□□□□ -0.01
SP140-210ENST00000479539 CABP2Q9NPB3 220 aa15□□□□□ -0.01
SP140-210ENST00000479539 POLR3AO14802 1390 aaPredicted RBP14.99□□□□□ -0.01
SP140-210ENST00000479539 LMOD2Q6P5Q4 547 aa14.99□□□□□ -0.01
SP140-210ENST00000479539 QTRT2Q9H974 415 aaKnown RBP14.99□□□□□ -0.01
SP140-210ENST00000479539 TIMELESSQ9UNS1 1208 aa14.99□□□□□ -0.01
SP140-210ENST00000479539 ACEP12821 1306 aa14.98□□□□□ -0.01
SP140-210ENST00000479539 EVC2Q86UK5 1308 aa14.98□□□□□ -0.01
SP140-210ENST00000479539 CABLES1Q8TDN4 633 aa14.98□□□□□ -0.01
SP140-210ENST00000479539 USP21Q9UK80 565 aa14.98□□□□□ -0.01
SP140-210ENST00000479539 COL22A1Q8NFW1 1626 aaPredicted RBP14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms