RNA–Protein interactions for RNA: ENST00000479501.5

COL20A1-206, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 4,536 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-206ENST00000479501 GOLGA6L4A6NEF3 574 aa17.74■□□□□ 0.43
COL20A1-206ENST00000479501 ZNF330Q9Y3S2 320 aaPredicted RBP17.74■□□□□ 0.43
COL20A1-206ENST00000479501 RALGAPBQ86X10 1494 aa17.74■□□□□ 0.43
COL20A1-206ENST00000479501 PSME1Q06323 249 aa17.73■□□□□ 0.43
COL20A1-206ENST00000479501 WWC1Q8IX03 1113 aa17.73■□□□□ 0.43
COL20A1-206ENST00000479501 NRDCO43847 1150 aa17.73■□□□□ 0.43
COL20A1-206ENST00000479501 NLRP6P59044 892 aa17.73■□□□□ 0.43
COL20A1-206ENST00000479501 C1orf141Q5JVX7 400 aa17.73■□□□□ 0.43
COL20A1-206ENST00000479501 GPATCH3Q96I76 525 aa17.73■□□□□ 0.43
COL20A1-206ENST00000479501 SCAF11Q99590 1463 aaKnown RBP17.73■□□□□ 0.43
COL20A1-206ENST00000479501 TSPYL4Q9UJ04 414 aa17.73■□□□□ 0.43
COL20A1-206ENST00000479501 ST18O60284 1047 aa17.72■□□□□ 0.43
COL20A1-206ENST00000479501 KIAA2012Q0VF49 1180 aa17.72■□□□□ 0.43
COL20A1-206ENST00000479501 IDI1Q13907 227 aa17.72■□□□□ 0.43
COL20A1-206ENST00000479501 NECTIN2Q92692 538 aa17.72■□□□□ 0.43
COL20A1-206ENST00000479501 BACH2Q9BYV9 841 aa17.72■□□□□ 0.43
COL20A1-206ENST00000479501 EIF2S2P20042 333 aaKnown RBP17.71■□□□□ 0.43
COL20A1-206ENST00000479501 FKBP5Q13451 457 aaPredicted RBP17.71■□□□□ 0.43
COL20A1-206ENST00000479501 SYCP2Q9BX26 1530 aa17.71■□□□□ 0.43
COL20A1-206ENST00000479501 GOLGA6L6A8MZA4 724 aa17.71■□□□□ 0.43
COL20A1-206ENST00000479501 ZNF692Q9BU19 519 aaPredicted RBP17.71■□□□□ 0.43
COL20A1-206ENST00000479501 SAMD9Q5K651 1589 aa17.71■□□□□ 0.42
COL20A1-206ENST00000479501 TAOK2Q9UL54 1235 aa17.7■□□□□ 0.42
COL20A1-206ENST00000479501 RTEL1-TNFRSF6BF6WH68 1400 aa17.7■□□□□ 0.42
COL20A1-206ENST00000479501 VSIG10Q8N0Z9 540 aa17.7■□□□□ 0.42
COL20A1-206ENST00000479501 CT47B1P0C2W7 299 aaPredicted RBP17.7■□□□□ 0.42
COL20A1-206ENST00000479501 RILPL2Q969X0 211 aa17.7■□□□□ 0.42
COL20A1-206ENST00000479501 EIF4G3O43432 1585 aaKnown RBP17.69■□□□□ 0.42
COL20A1-206ENST00000479501 AMER1Q5JTC6 1135 aaPredicted RBP17.69■□□□□ 0.42
COL20A1-206ENST00000479501 NUP160Q12769 1436 aa17.69■□□□□ 0.42
COL20A1-206ENST00000479501 NUTM2GQ5VZR2 741 aa17.69■□□□□ 0.42
COL20A1-206ENST00000479501 PDZRN3Q9UPQ7 1066 aa17.69■□□□□ 0.42
COL20A1-206ENST00000479501 CHMP3Q9Y3E7 222 aa17.68■□□□□ 0.42
COL20A1-206ENST00000479501 PRAG1Q86YV5 1406 aa17.68■□□□□ 0.42
COL20A1-206ENST00000479501 FAM135AQ9P2D6 1515 aa17.68■□□□□ 0.42
COL20A1-206ENST00000479501 DUOX2Q9NRD8 1548 aa17.67■□□□□ 0.42
COL20A1-206ENST00000479501 NOL8Q76FK4 1167 aaKnown RBP17.67■□□□□ 0.42
COL20A1-206ENST00000479501 C14orf93Q9H972 538 aaKnown RBP17.67■□□□□ 0.42
COL20A1-206ENST00000479501 NOS1P29475 1434 aa17.67■□□□□ 0.42
COL20A1-206ENST00000479501 TWISTNBQ3B726 338 aaPredicted RBP17.67■□□□□ 0.42
COL20A1-206ENST00000479501 NPHP1O15259 732 aa17.67■□□□□ 0.42
COL20A1-206ENST00000479501 DRC7Q8IY82 874 aa17.67■□□□□ 0.42
COL20A1-206ENST00000479501 NOB1Q9ULX3 412 aaKnown RBP17.67■□□□□ 0.42
COL20A1-206ENST00000479501 PZPP20742 1482 aa17.67■□□□□ 0.42
COL20A1-206ENST00000479501 NINLQ9Y2I6 1382 aa17.66■□□□□ 0.42
COL20A1-206ENST00000479501 C22orf23Q9BZE7 217 aa17.66■□□□□ 0.42
COL20A1-206ENST00000479501 SULT6B1Q6IMI4 303 aa17.66■□□□□ 0.42
COL20A1-206ENST00000479501 CCDC61Q9Y6R9 512 aa17.66■□□□□ 0.42
COL20A1-206ENST00000479501 SHANK2Q9UPX8 1470 aa17.65■□□□□ 0.42
COL20A1-206ENST00000479501 DNMT1P26358 1616 aaKnown RBP17.65■□□□□ 0.42
COL20A1-206ENST00000479501 FCHSD2O94868 740 aa17.65■□□□□ 0.42
COL20A1-206ENST00000479501 TMPOP42166 694 aaKnown RBP17.65■□□□□ 0.42
COL20A1-206ENST00000479501 ATF7IPQ6VMQ6 1270 aa17.65■□□□□ 0.42
COL20A1-206ENST00000479501 SLC26A8Q96RN1 970 aa17.65■□□□□ 0.42
COL20A1-206ENST00000479501 KDM5BQ9UGL1 1544 aa17.65■□□□□ 0.42
COL20A1-206ENST00000479501 TRAPPC8Q9Y2L5 1435 aa17.65■□□□□ 0.42
COL20A1-206ENST00000479501 REC8O95072 547 aa17.65■□□□□ 0.42
COL20A1-206ENST00000479501 C20orf194Q5TEA3 1177 aa17.64■□□□□ 0.42
COL20A1-206ENST00000479501 FBXO31Q5XUX0 539 aaPredicted RBP17.64■□□□□ 0.41
COL20A1-206ENST00000479501 WAPLQ7Z5K2 1190 aa17.64■□□□□ 0.41
COL20A1-206ENST00000479501 THEMISQ8N1K5 641 aaPredicted RBP17.64■□□□□ 0.41
COL20A1-206ENST00000479501 DDX11L8A8MPP1 907 aa17.64■□□□□ 0.41
COL20A1-206ENST00000479501 TESK2Q96S53 571 aa17.64■□□□□ 0.41
COL20A1-206ENST00000479501 C9orf78Q9NZ63 289 aaPredicted RBP17.63■□□□□ 0.41
COL20A1-206ENST00000479501 MVPQ14764 893 aaKnown RBP17.63■□□□□ 0.41
COL20A1-206ENST00000479501 ABTB2Q8N961 1025 aa17.63■□□□□ 0.41
COL20A1-206ENST00000479501 GORABQ5T7V8 394 aa17.63■□□□□ 0.41
COL20A1-206ENST00000479501 DUSP27Q5VZP5 1158 aa17.63■□□□□ 0.41
COL20A1-206ENST00000479501 PBRM1Q86U86 1689 aa17.63■□□□□ 0.41
COL20A1-206ENST00000479501 GAS2L2Q8NHY3 880 aa17.62■□□□□ 0.41
COL20A1-206ENST00000479501 DENND4BO75064 1496 aaPredicted RBP17.62■□□□□ 0.41
COL20A1-206ENST00000479501 MAGI3Q5TCQ9 1506 aa17.62■□□□□ 0.41
COL20A1-206ENST00000479501 NUDT16Q96DE0 195 aaKnown RBP17.62■□□□□ 0.41
COL20A1-206ENST00000479501 CHMP5Q9NZZ3 219 aa17.62■□□□□ 0.41
COL20A1-206ENST00000479501 RRS1Q15050 365 aaKnown RBP17.61■□□□□ 0.41
COL20A1-206ENST00000479501 NEXNQ0ZGT2 675 aa17.6■□□□□ 0.41
COL20A1-206ENST00000479501 TAF7LQ5H9L4 462 aa17.6■□□□□ 0.41
COL20A1-206ENST00000479501 NFKBIBQ15653 356 aa17.6■□□□□ 0.41
COL20A1-206ENST00000479501 SYAP1Q96A49 352 aaPredicted RBP17.6■□□□□ 0.41
COL20A1-206ENST00000479501 ASXL2Q76L83 1435 aa17.59■□□□□ 0.41
COL20A1-206ENST00000479501 ADGRL2O95490 1459 aa17.59■□□□□ 0.41
COL20A1-206ENST00000479501 PARD3Q8TEW0 1356 aa17.59■□□□□ 0.41
COL20A1-206ENST00000479501 RARSP54136 660 aaKnown RBP17.59■□□□□ 0.41
COL20A1-206ENST00000479501 ARHGEF12Q9NZN5 1544 aa17.58■□□□□ 0.41
COL20A1-206ENST00000479501 INTS3Q68E01 1043 aaKnown RBP17.58■□□□□ 0.41
COL20A1-206ENST00000479501 TTC5Q8N0Z6 440 aa17.58■□□□□ 0.4
COL20A1-206ENST00000479501 C1orf115Q9H7X2 142 aa17.58■□□□□ 0.4
COL20A1-206ENST00000479501 NFE2L2Q16236 605 aa17.57■□□□□ 0.4
COL20A1-206ENST00000479501 FOXD4L5Q5VV16 416 aaPredicted RBP17.57■□□□□ 0.4
COL20A1-206ENST00000479501 FOXD4L4Q8WXT5 416 aaPredicted RBP17.57■□□□□ 0.4
COL20A1-206ENST00000479501 ZNF428Q96B54 188 aa17.57■□□□□ 0.4
COL20A1-206ENST00000479501 TARBP1Q13395 1621 aaKnown RBP17.57■□□□□ 0.4
COL20A1-206ENST00000479501 NKTRP30414 1462 aaKnown RBP17.57■□□□□ 0.4
COL20A1-206ENST00000479501 DDX58O95786 925 aaKnown RBP17.57■□□□□ 0.4
COL20A1-206ENST00000479501 GCC1Q96CN9 775 aa17.57■□□□□ 0.4
COL20A1-206ENST00000479501 DDX49Q9Y6V7 483 aaKnown RBP17.56■□□□□ 0.4
COL20A1-206ENST00000479501 CDC45O75419 566 aa17.56■□□□□ 0.4
COL20A1-206ENST00000479501 RAPGEF4Q8WZA2 1011 aa17.56■□□□□ 0.4
COL20A1-206ENST00000479501 TEX14Q8IWB6 1497 aa17.56■□□□□ 0.4
COL20A1-206ENST00000479501 DIAPH3Q9NSV4 1193 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms