RNA–Protein interactions for RNA: ENST00000479320.5

HLA-A-206, Transcript of major histocompatibility complex, class I, A, humanhuman

Gene HLA-A, Length 1,334 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-206ENST00000479320 LAMC1P11047 1609 aa26.06■■□□□ 1.76
HLA-A-206ENST00000479320 PLEKHH1Q9ULM0 1364 aa26.05■■□□□ 1.76
HLA-A-206ENST00000479320 DHX57Q6P158 1386 aaKnown RBP26.05■■□□□ 1.76
HLA-A-206ENST00000479320 CDC42BPGQ6DT37 1551 aa26.04■■□□□ 1.76
HLA-A-206ENST00000479320 DCAF11Q8TEB1 546 aa26.04■■□□□ 1.76
HLA-A-206ENST00000479320 LRRC59Q96AG4 307 aaKnown RBP26.04■■□□□ 1.76
HLA-A-206ENST00000479320 SIRT1Q96EB6 747 aa26.04■■□□□ 1.76
HLA-A-206ENST00000479320 KDM2AQ9Y2K7 1162 aa26.04■■□□□ 1.76
HLA-A-206ENST00000479320 LRP6O75581 1613 aa26.03■■□□□ 1.76
HLA-A-206ENST00000479320 POTEAQ6S8J7 498 aa26.01■■□□□ 1.75
HLA-A-206ENST00000479320 STAC3Q96MF2 364 aa26■■□□□ 1.75
HLA-A-206ENST00000479320 NUTM2BA6NNL0 878 aaPredicted RBP25.97■■□□□ 1.75
HLA-A-206ENST00000479320 NUTM2EB1AL46 878 aaPredicted RBP25.97■■□□□ 1.75
HLA-A-206ENST00000479320 ESCO1Q5FWF5 840 aa25.97■■□□□ 1.75
HLA-A-206ENST00000479320 MEX3CQ5U5Q3 659 aaKnown RBP25.97■■□□□ 1.75
HLA-A-206ENST00000479320 NUTM2AQ8IVF1 878 aaPredicted RBP25.97■■□□□ 1.75
HLA-A-206ENST00000479320 SOS2Q07890 1332 aaPredicted RBP25.96■■□□□ 1.75
HLA-A-206ENST00000479320 NUTM2FA1L443 756 aa25.96■■□□□ 1.75
HLA-A-206ENST00000479320 ADGRB1O14514 1584 aa25.95■■□□□ 1.74
HLA-A-206ENST00000479320 PNPLA6Q8IY17 1366 aa25.95■■□□□ 1.74
HLA-A-206ENST00000479320 PRAM1Q96QH2 718 aa25.94■■□□□ 1.74
HLA-A-206ENST00000479320 FMN2Q9NZ56 1722 aa25.94■■□□□ 1.74
HLA-A-206ENST00000479320 DLC1Q96QB1 1528 aa25.92■■□□□ 1.74
HLA-A-206ENST00000479320 SAFB2Q14151 953 aaKnown RBP eCLIP25.91■■□□□ 1.74
HLA-A-206ENST00000479320 POGKQ9P215 609 aa25.9■■□□□ 1.74
HLA-A-206ENST00000479320 TRAK1Q9UPV9 953 aa25.9■■□□□ 1.74
HLA-A-206ENST00000479320 NPHP3Q7Z494 1330 aa25.9■■□□□ 1.74
HLA-A-206ENST00000479320 FOXO3O43524 673 aa25.89■■□□□ 1.74
HLA-A-206ENST00000479320 RGPD8O14715 1765 aaPredicted RBP25.87■■□□□ 1.73
HLA-A-206ENST00000479320 ZNF772Q68DY9 489 aaPredicted RBP25.87■■□□□ 1.73
HLA-A-206ENST00000479320 PXDNQ92626 1479 aa25.85■■□□□ 1.73
HLA-A-206ENST00000479320 XPCQ01831 940 aaPredicted RBP25.85■■□□□ 1.73
HLA-A-206ENST00000479320 KIF1AQ12756 1690 aa25.82■■□□□ 1.72
HLA-A-206ENST00000479320 C8orf37Q96NL8 207 aa25.81■■□□□ 1.72
HLA-A-206ENST00000479320 AFF2P51816 1311 aa25.81■■□□□ 1.72
HLA-A-206ENST00000479320 ADGRB2O60241 1585 aa25.8■■□□□ 1.72
HLA-A-206ENST00000479320 COL22A1Q8NFW1 1626 aaPredicted RBP25.8■■□□□ 1.72
HLA-A-206ENST00000479320 ADAMTS2O95450 1211 aa25.8■■□□□ 1.72
HLA-A-206ENST00000479320 HIRIP3Q9BW71 556 aaPredicted RBP25.8■■□□□ 1.72
HLA-A-206ENST00000479320 PHF8Q9UPP1 1060 aa25.8■■□□□ 1.72
HLA-A-206ENST00000479320 MINK1Q8N4C8 1332 aaPredicted RBP25.79■■□□□ 1.72
HLA-A-206ENST00000479320 KIAA1210Q9ULL0 1709 aa25.78■■□□□ 1.72
HLA-A-206ENST00000479320 KRT28Q7Z3Y7 464 aa25.77■■□□□ 1.72
HLA-A-206ENST00000479320 ARHGEF28Q8N1W1 1705 aaKnown RBP25.76■■□□□ 1.71
HLA-A-206ENST00000479320 USP32Q8NFA0 1604 aa25.76■■□□□ 1.71
HLA-A-206ENST00000479320 SIN3AQ96ST3 1273 aa25.76■■□□□ 1.71
HLA-A-206ENST00000479320 ANKARQ7Z5J8 1434 aa25.75■■□□□ 1.71
HLA-A-206ENST00000479320 NGLY1Q96IV0 654 aa25.75■■□□□ 1.71
HLA-A-206ENST00000479320 NBPF1Q3BBV0 1214 aa25.74■■□□□ 1.71
HLA-A-206ENST00000479320 SPATA31A3Q5VYP0 1347 aa25.73■■□□□ 1.71
HLA-A-206ENST00000479320 WASLO00401 505 aaPredicted RBP25.73■■□□□ 1.71
HLA-A-206ENST00000479320 RXRBP28702 533 aa25.72■■□□□ 1.71
HLA-A-206ENST00000479320 L3MBTL2Q969R5 705 aa25.72■■□□□ 1.71
HLA-A-206ENST00000479320 PMFBP1Q8TBY8 1022 aa25.71■■□□□ 1.71
HLA-A-206ENST00000479320 PSME1Q06323 249 aa25.7■■□□□ 1.71
HLA-A-206ENST00000479320 QTRT2Q9H974 415 aaKnown RBP25.7■■□□□ 1.71
HLA-A-206ENST00000479320 PRR36Q9H6K5 1346 aa25.7■■□□□ 1.7
HLA-A-206ENST00000479320 NEUROD1Q13562 356 aa25.69■■□□□ 1.7
HLA-A-206ENST00000479320 EIF3AQ14152 1382 aaKnown RBP25.69■■□□□ 1.7
HLA-A-206ENST00000479320 TULP4Q9NRJ4 1543 aa25.68■■□□□ 1.7
HLA-A-206ENST00000479320 FNBP4Q8N3X1 1017 aaPredicted RBP25.66■■□□□ 1.7
HLA-A-206ENST00000479320 MARF1Q9Y4F3 1742 aaKnown RBP25.66■■□□□ 1.7
HLA-A-206ENST00000479320 USP21Q9UK80 565 aa25.65■■□□□ 1.7
HLA-A-206ENST00000479320 SBNO1A3KN83 1393 aa25.65■■□□□ 1.7
HLA-A-206ENST00000479320 TNS3Q68CZ2 1445 aa25.65■■□□□ 1.7
HLA-A-206ENST00000479320 TRIM26Q12899 539 aaPredicted RBP25.64■■□□□ 1.7
HLA-A-206ENST00000479320 RBM6P78332 1123 aaKnown RBP25.63■■□□□ 1.69
HLA-A-206ENST00000479320 CDK12Q9NYV4 1490 aaPredicted RBP25.62■■□□□ 1.69
HLA-A-206ENST00000479320 CDK19Q9BWU1 502 aa25.62■■□□□ 1.69
HLA-A-206ENST00000479320 LMOD2Q6P5Q4 547 aa25.61■■□□□ 1.69
HLA-A-206ENST00000479320 NUDT16Q96DE0 195 aaKnown RBP25.61■■□□□ 1.69
HLA-A-206ENST00000479320 CABLES1Q8TDN4 633 aa25.6■■□□□ 1.69
HLA-A-206ENST00000479320 GPRASP1Q5JY77 1395 aa25.59■■□□□ 1.69
HLA-A-206ENST00000479320 NGDNQ8NEJ9 315 aaKnown RBP25.59■■□□□ 1.69
HLA-A-206ENST00000479320 TRPC5Q9UL62 973 aaPredicted RBP25.59■■□□□ 1.69
HLA-A-206ENST00000479320 ATP7BP35670 1465 aa25.59■■□□□ 1.69
HLA-A-206ENST00000479320 TRPM3Q9HCF6 1732 aaPredicted RBP25.58■■□□□ 1.69
HLA-A-206ENST00000479320 ARHGEF10O15013 1369 aa25.58■■□□□ 1.69
HLA-A-206ENST00000479320 ITSN1Q15811 1721 aa25.58■■□□□ 1.68
HLA-A-206ENST00000479320 BCL9LQ86UU0 1499 aa25.57■■□□□ 1.68
HLA-A-206ENST00000479320 PLEKHG5O94827 1062 aa25.57■■□□□ 1.68
HLA-A-206ENST00000479320 CENPJQ9HC77 1338 aaPredicted RBP25.57■■□□□ 1.68
HLA-A-206ENST00000479320 TRPM1Q7Z4N2 1603 aa25.56■■□□□ 1.68
HLA-A-206ENST00000479320 HAP1P54257 671 aaPredicted RBP25.56■■□□□ 1.68
HLA-A-206ENST00000479320 RGS12O14924 1447 aa25.55■■□□□ 1.68
HLA-A-206ENST00000479320 ATRNO75882 1429 aa25.55■■□□□ 1.68
HLA-A-206ENST00000479320 ALS2Q96Q42 1657 aa25.53■■□□□ 1.68
HLA-A-206ENST00000479320 CCDC61Q9Y6R9 512 aa25.53■■□□□ 1.68
HLA-A-206ENST00000479320 ABCA3Q99758 1704 aa25.53■■□□□ 1.68
HLA-A-206ENST00000479320 QRICH2Q9H0J4 1663 aa25.51■■□□□ 1.67
HLA-A-206ENST00000479320 SLIT2O94813 1529 aa25.51■■□□□ 1.67
HLA-A-206ENST00000479320 TOPAZ1Q8N9V7 1692 aa25.5■■□□□ 1.67
HLA-A-206ENST00000479320 PAK3O75914 559 aaPredicted RBP25.5■■□□□ 1.67
HLA-A-206ENST00000479320 NBPF8Q3BBV2 869 aa25.5■■□□□ 1.67
HLA-A-206ENST00000479320 UPF1Q92900 1129 aaKnown RBP eCLIP25.5■■□□□ 1.67
HLA-A-206ENST00000479320 ROCK2O75116 1388 aaKnown RBP25.49■■□□□ 1.67
HLA-A-206ENST00000479320 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.49■■□□□ 1.67
HLA-A-206ENST00000479320 UNC5CLQ8IV45 518 aa25.49■■□□□ 1.67
HLA-A-206ENST00000479320 PLEKHG3A1L390 1219 aa25.48■■□□□ 1.67
HLA-A-206ENST00000479320 SRPK2P78362 688 aaKnown RBP25.48■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms