RNA–Protein interactions for RNA: ENST00000478693.1

SRRT-211, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 655 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-211ENST00000478693 C19orf44Q9H6X5 657 aa16.19■□□□□ 0.18
SRRT-211ENST00000478693 NALCNQ8IZF0 1738 aa16.19■□□□□ 0.18
SRRT-211ENST00000478693 CARD11Q9BXL7 1154 aa16.18■□□□□ 0.18
SRRT-211ENST00000478693 EIF3AQ14152 1382 aaKnown RBP16.17■□□□□ 0.18
SRRT-211ENST00000478693 CADPS2Q86UW7 1296 aa16.17■□□□□ 0.18
SRRT-211ENST00000478693 DCCP43146 1447 aa16.17■□□□□ 0.18
SRRT-211ENST00000478693 ARHGEF28Q8N1W1 1705 aaKnown RBP16.16■□□□□ 0.18
SRRT-211ENST00000478693 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.16■□□□□ 0.18
SRRT-211ENST00000478693 SIRT1Q96EB6 747 aa16.16■□□□□ 0.18
SRRT-211ENST00000478693 CDC42BPGQ6DT37 1551 aa16.14■□□□□ 0.17
SRRT-211ENST00000478693 MINK1Q8N4C8 1332 aaPredicted RBP16.14■□□□□ 0.17
SRRT-211ENST00000478693 GPRASP1Q5JY77 1395 aa16.13■□□□□ 0.17
SRRT-211ENST00000478693 CENPJQ9HC77 1338 aaPredicted RBP16.13■□□□□ 0.17
SRRT-211ENST00000478693 HIRIP3Q9BW71 556 aaPredicted RBP16.12■□□□□ 0.17
SRRT-211ENST00000478693 SLAIN2Q9P270 581 aa16.1■□□□□ 0.17
SRRT-211ENST00000478693 MST1RQ04912 1400 aa16.1■□□□□ 0.17
SRRT-211ENST00000478693 ADGRB2O60241 1585 aa16.09■□□□□ 0.17
SRRT-211ENST00000478693 QRICH2Q9H0J4 1663 aa16.09■□□□□ 0.17
SRRT-211ENST00000478693 NUTM2FA1L443 756 aa16.09■□□□□ 0.17
SRRT-211ENST00000478693 ROBO1Q9Y6N7 1651 aa16.08■□□□□ 0.16
SRRT-211ENST00000478693 C1orf167Q5SNV9 1468 aa16.07■□□□□ 0.16
SRRT-211ENST00000478693 FMN2Q9NZ56 1722 aa16.06■□□□□ 0.16
SRRT-211ENST00000478693 ILDR1Q86SU0 546 aaPredicted RBP16.06■□□□□ 0.16
SRRT-211ENST00000478693 USP47Q96K76 1375 aa16.05■□□□□ 0.16
SRRT-211ENST00000478693 WASLO00401 505 aaPredicted RBP16.04■□□□□ 0.16
SRRT-211ENST00000478693 ESCO1Q5FWF5 840 aa16.04■□□□□ 0.16
SRRT-211ENST00000478693 TULP4Q9NRJ4 1543 aa16.04■□□□□ 0.16
SRRT-211ENST00000478693 SRPK2P78362 688 aaKnown RBP16.03■□□□□ 0.16
SRRT-211ENST00000478693 BRINP3Q76B58 766 aa16.03■□□□□ 0.16
SRRT-211ENST00000478693 ANKARQ7Z5J8 1434 aa16.02■□□□□ 0.16
SRRT-211ENST00000478693 EVC2Q86UK5 1308 aa16.02■□□□□ 0.16
SRRT-211ENST00000478693 ORAI2Q96SN7 254 aa16.01■□□□□ 0.15
SRRT-211ENST00000478693 CDK19Q9BWU1 502 aa16.01■□□□□ 0.15
SRRT-211ENST00000478693 ST20-MTHFSA0A0A6YYL1 179 aa16■□□□□ 0.15
SRRT-211ENST00000478693 HSPA1LP34931 641 aa16■□□□□ 0.15
SRRT-211ENST00000478693 SBNO2Q9Y2G9 1366 aa15.99■□□□□ 0.15
SRRT-211ENST00000478693 KIF1AQ12756 1690 aa15.99■□□□□ 0.15
SRRT-211ENST00000478693 ATP7BP35670 1465 aa15.98■□□□□ 0.15
SRRT-211ENST00000478693 PHLPP1O60346 1717 aa15.98■□□□□ 0.15
SRRT-211ENST00000478693 EIF4G2P78344 907 aaKnown RBP eCLIP15.98■□□□□ 0.15
SRRT-211ENST00000478693 CABP2Q9NPB3 220 aa15.98■□□□□ 0.15
SRRT-211ENST00000478693 AHDC1Q5TGY3 1603 aaPredicted RBP15.97■□□□□ 0.15
SRRT-211ENST00000478693 USP32Q8NFA0 1604 aa15.97■□□□□ 0.15
SRRT-211ENST00000478693 NUDT16Q96DE0 195 aaKnown RBP15.97■□□□□ 0.15
SRRT-211ENST00000478693 PHF8Q9UPP1 1060 aa15.97■□□□□ 0.15
SRRT-211ENST00000478693 PRR36Q9H6K5 1346 aa15.96■□□□□ 0.15
SRRT-211ENST00000478693 PMFBP1Q8TBY8 1022 aa15.96■□□□□ 0.15
SRRT-211ENST00000478693 ITSN1Q15811 1721 aa15.96■□□□□ 0.15
SRRT-211ENST00000478693 NPHP3Q7Z494 1330 aa15.95■□□□□ 0.14
SRRT-211ENST00000478693 NHSL1Q5SYE7 1610 aa15.95■□□□□ 0.14
SRRT-211ENST00000478693 SLC24A1O60721 1099 aa15.95■□□□□ 0.14
SRRT-211ENST00000478693 DDX17Q92841 729 aaKnown RBP15.95■□□□□ 0.14
SRRT-211ENST00000478693 FOXO3O43524 673 aa15.94■□□□□ 0.14
SRRT-211ENST00000478693 TMF1P82094 1093 aa15.94■□□□□ 0.14
SRRT-211ENST00000478693 ATAD2Q6PL18 1390 aa15.94■□□□□ 0.14
SRRT-211ENST00000478693 PPIP5K1Q6PFW1 1433 aa15.94■□□□□ 0.14
SRRT-211ENST00000478693 HSPA5P11021 654 aaKnown RBP15.93■□□□□ 0.14
SRRT-211ENST00000478693 XPCQ01831 940 aaPredicted RBP15.93■□□□□ 0.14
SRRT-211ENST00000478693 NGDNQ8NEJ9 315 aaKnown RBP15.93■□□□□ 0.14
SRRT-211ENST00000478693 RGPD8O14715 1765 aaPredicted RBP15.92■□□□□ 0.14
SRRT-211ENST00000478693 TOPAZ1Q8N9V7 1692 aa15.92■□□□□ 0.14
SRRT-211ENST00000478693 TESK2Q96S53 571 aa15.92■□□□□ 0.14
SRRT-211ENST00000478693 CCDC61Q9Y6R9 512 aa15.92■□□□□ 0.14
SRRT-211ENST00000478693 COL16A1Q07092 1604 aaPredicted RBP15.92■□□□□ 0.14
SRRT-211ENST00000478693 ZEB1P37275 1124 aaPredicted RBP15.91■□□□□ 0.14
SRRT-211ENST00000478693 PSME1Q06323 249 aa15.9■□□□□ 0.14
SRRT-211ENST00000478693 DISP3Q9P2K9 1392 aa15.89■□□□□ 0.13
SRRT-211ENST00000478693 CDCA8Q53HL2 280 aa15.89■□□□□ 0.13
SRRT-211ENST00000478693 TMC1Q8TDI8 760 aa15.89■□□□□ 0.13
SRRT-211ENST00000478693 POLR3GLQ9BT43 218 aa15.89■□□□□ 0.13
SRRT-211ENST00000478693 PXDNQ92626 1479 aa15.89■□□□□ 0.13
SRRT-211ENST00000478693 JCADQ9P266 1359 aa15.88■□□□□ 0.13
SRRT-211ENST00000478693 KRT28Q7Z3Y7 464 aa15.88■□□□□ 0.13
SRRT-211ENST00000478693 LRRC59Q96AG4 307 aaKnown RBP15.88■□□□□ 0.13
SRRT-211ENST00000478693 CABP1Q9NZU7 370 aa15.88■□□□□ 0.13
SRRT-211ENST00000478693 ACEP12821 1306 aa15.88■□□□□ 0.13
SRRT-211ENST00000478693 SOS2Q07890 1332 aaPredicted RBP15.88■□□□□ 0.13
SRRT-211ENST00000478693 LMOD2Q6P5Q4 547 aa15.87■□□□□ 0.13
SRRT-211ENST00000478693 PLEKHG3A1L390 1219 aa15.86■□□□□ 0.13
SRRT-211ENST00000478693 PAK3O75914 559 aaPredicted RBP15.86■□□□□ 0.13
SRRT-211ENST00000478693 POLR3AO14802 1390 aaPredicted RBP15.85■□□□□ 0.13
SRRT-211ENST00000478693 TNS3Q68CZ2 1445 aa15.85■□□□□ 0.13
SRRT-211ENST00000478693 PUS7Q96PZ0 661 aaKnown RBP15.84■□□□□ 0.13
SRRT-211ENST00000478693 NINLQ9Y2I6 1382 aa15.84■□□□□ 0.13
SRRT-211ENST00000478693 HDGFL2Q7Z4V5 671 aaPredicted RBP15.83■□□□□ 0.12
SRRT-211ENST00000478693 SBNO1A3KN83 1393 aa15.83■□□□□ 0.12
SRRT-211ENST00000478693 PNPLA6Q8IY17 1366 aa15.83■□□□□ 0.12
SRRT-211ENST00000478693 SHPRHQ149N8 1683 aa15.83■□□□□ 0.12
SRRT-211ENST00000478693 PLEKHG5O94827 1062 aa15.82■□□□□ 0.12
SRRT-211ENST00000478693 NUTM2BA6NNL0 878 aaPredicted RBP15.81■□□□□ 0.12
SRRT-211ENST00000478693 NUTM2EB1AL46 878 aaPredicted RBP15.81■□□□□ 0.12
SRRT-211ENST00000478693 ARHGEF10O15013 1369 aa15.81■□□□□ 0.12
SRRT-211ENST00000478693 USP6P35125 1406 aa15.81■□□□□ 0.12
SRRT-211ENST00000478693 HAP1P54257 671 aaPredicted RBP15.81■□□□□ 0.12
SRRT-211ENST00000478693 SPATA31A6Q5VVP1 1343 aa15.81■□□□□ 0.12
SRRT-211ENST00000478693 SPATA31A3Q5VYP0 1347 aa15.81■□□□□ 0.12
SRRT-211ENST00000478693 KTN1Q86UP2 1357 aaKnown RBP15.81■□□□□ 0.12
SRRT-211ENST00000478693 NUTM2AQ8IVF1 878 aaPredicted RBP15.81■□□□□ 0.12
SRRT-211ENST00000478693 TERF2IPQ9NYB0 399 aa15.81■□□□□ 0.12
SRRT-211ENST00000478693 TRPM3Q9HCF6 1732 aaPredicted RBP15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms