RNA–Protein interactions for RNA: ENST00000478616.1

SREBF1-212, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-212ENST00000478616 FMN2Q9NZ56 1722 aa27.53■■■□□ 2
SREBF1-212ENST00000478616 DCAF11Q8TEB1 546 aa27.52■■■□□ 2
SREBF1-212ENST00000478616 LRP6O75581 1613 aa27.52■■■□□ 2
SREBF1-212ENST00000478616 JCADQ9P266 1359 aa27.51■■□□□ 1.99
SREBF1-212ENST00000478616 KDM2AQ9Y2K7 1162 aa27.51■■□□□ 1.99
SREBF1-212ENST00000478616 DLC1Q96QB1 1528 aa27.51■■□□□ 1.99
SREBF1-212ENST00000478616 ORAI2Q96SN7 254 aa27.5■■□□□ 1.99
SREBF1-212ENST00000478616 SIRT1Q96EB6 747 aa27.49■■□□□ 1.99
SREBF1-212ENST00000478616 RGPD8O14715 1765 aaPredicted RBP27.49■■□□□ 1.99
SREBF1-212ENST00000478616 ARHGEF28Q8N1W1 1705 aaKnown RBP27.44■■□□□ 1.98
SREBF1-212ENST00000478616 KIAA1210Q9ULL0 1709 aa27.44■■□□□ 1.98
SREBF1-212ENST00000478616 USP32Q8NFA0 1604 aa27.42■■□□□ 1.98
SREBF1-212ENST00000478616 ADGRB2O60241 1585 aa27.41■■□□□ 1.98
SREBF1-212ENST00000478616 SIN3AQ96ST3 1273 aa27.41■■□□□ 1.98
SREBF1-212ENST00000478616 STAC3Q96MF2 364 aa27.4■■□□□ 1.98
SREBF1-212ENST00000478616 PRAM1Q96QH2 718 aa27.4■■□□□ 1.98
SREBF1-212ENST00000478616 SOS2Q07890 1332 aaPredicted RBP27.39■■□□□ 1.97
SREBF1-212ENST00000478616 PXDNQ92626 1479 aa27.38■■□□□ 1.97
SREBF1-212ENST00000478616 PNPLA6Q8IY17 1366 aa27.37■■□□□ 1.97
SREBF1-212ENST00000478616 NUTM2FA1L443 756 aa27.36■■□□□ 1.97
SREBF1-212ENST00000478616 TRAK1Q9UPV9 953 aa27.36■■□□□ 1.97
SREBF1-212ENST00000478616 SPATA31A6Q5VVP1 1343 aa27.36■■□□□ 1.97
SREBF1-212ENST00000478616 SAFB2Q14151 953 aaKnown RBP eCLIP27.35■■□□□ 1.97
SREBF1-212ENST00000478616 PHF23Q9BUL5 403 aaPredicted RBP27.35■■□□□ 1.97
SREBF1-212ENST00000478616 POTEAQ6S8J7 498 aa27.33■■□□□ 1.97
SREBF1-212ENST00000478616 COL22A1Q8NFW1 1626 aaPredicted RBP27.32■■□□□ 1.96
SREBF1-212ENST00000478616 TRIM26Q12899 539 aaPredicted RBP27.32■■□□□ 1.96
SREBF1-212ENST00000478616 NBPF1Q3BBV0 1214 aa27.32■■□□□ 1.96
SREBF1-212ENST00000478616 L3MBTL2Q969R5 705 aa27.32■■□□□ 1.96
SREBF1-212ENST00000478616 KIF1AQ12756 1690 aa27.31■■□□□ 1.96
SREBF1-212ENST00000478616 SOCS7O14512 581 aa27.31■■□□□ 1.96
SREBF1-212ENST00000478616 ESCO1Q5FWF5 840 aa27.31■■□□□ 1.96
SREBF1-212ENST00000478616 LRRC59Q96AG4 307 aaKnown RBP27.3■■□□□ 1.96
SREBF1-212ENST00000478616 TRPM1Q7Z4N2 1603 aa27.27■■□□□ 1.96
SREBF1-212ENST00000478616 PRR36Q9H6K5 1346 aa27.26■■□□□ 1.95
SREBF1-212ENST00000478616 FOXO3O43524 673 aa27.26■■□□□ 1.95
SREBF1-212ENST00000478616 XPCQ01831 940 aaPredicted RBP27.25■■□□□ 1.95
SREBF1-212ENST00000478616 HIRIP3Q9BW71 556 aaPredicted RBP27.25■■□□□ 1.95
SREBF1-212ENST00000478616 POGKQ9P215 609 aa27.25■■□□□ 1.95
SREBF1-212ENST00000478616 NPHP3Q7Z494 1330 aa27.23■■□□□ 1.95
SREBF1-212ENST00000478616 MINK1Q8N4C8 1332 aaPredicted RBP27.23■■□□□ 1.95
SREBF1-212ENST00000478616 NUTM2BA6NNL0 878 aaPredicted RBP27.22■■□□□ 1.95
SREBF1-212ENST00000478616 NUTM2EB1AL46 878 aaPredicted RBP27.22■■□□□ 1.95
SREBF1-212ENST00000478616 NUTM2AQ8IVF1 878 aaPredicted RBP27.22■■□□□ 1.95
SREBF1-212ENST00000478616 ANKARQ7Z5J8 1434 aa27.22■■□□□ 1.95
SREBF1-212ENST00000478616 TULP4Q9NRJ4 1543 aa27.21■■□□□ 1.95
SREBF1-212ENST00000478616 NEUROD1Q13562 356 aa27.21■■□□□ 1.95
SREBF1-212ENST00000478616 TRPM3Q9HCF6 1732 aaPredicted RBP27.19■■□□□ 1.94
SREBF1-212ENST00000478616 MARF1Q9Y4F3 1742 aaKnown RBP27.19■■□□□ 1.94
SREBF1-212ENST00000478616 PHF8Q9UPP1 1060 aa27.18■■□□□ 1.94
SREBF1-212ENST00000478616 WASLO00401 505 aaPredicted RBP27.17■■□□□ 1.94
SREBF1-212ENST00000478616 ATP7BP35670 1465 aa27.17■■□□□ 1.94
SREBF1-212ENST00000478616 TOPAZ1Q8N9V7 1692 aa27.17■■□□□ 1.94
SREBF1-212ENST00000478616 NBPF8Q3BBV2 869 aa27.16■■□□□ 1.94
SREBF1-212ENST00000478616 QRICH2Q9H0J4 1663 aa27.14■■□□□ 1.93
SREBF1-212ENST00000478616 SPATA31A3Q5VYP0 1347 aa27.14■■□□□ 1.93
SREBF1-212ENST00000478616 ABCA3Q99758 1704 aa27.13■■□□□ 1.93
SREBF1-212ENST00000478616 MEX3CQ5U5Q3 659 aaKnown RBP27.12■■□□□ 1.93
SREBF1-212ENST00000478616 KRT28Q7Z3Y7 464 aa27.12■■□□□ 1.93
SREBF1-212ENST00000478616 ITSN1Q15811 1721 aa27.12■■□□□ 1.93
SREBF1-212ENST00000478616 ALS2Q96Q42 1657 aa27.11■■□□□ 1.93
SREBF1-212ENST00000478616 PMFBP1Q8TBY8 1022 aa27.11■■□□□ 1.93
SREBF1-212ENST00000478616 AFF2P51816 1311 aa27.11■■□□□ 1.93
SREBF1-212ENST00000478616 TNS3Q68CZ2 1445 aa27.08■■□□□ 1.93
SREBF1-212ENST00000478616 ADAMTS2O95450 1211 aa27.08■■□□□ 1.93
SREBF1-212ENST00000478616 CRYBG1Q9Y4K1 1723 aa27.07■■□□□ 1.92
SREBF1-212ENST00000478616 C8orf37Q96NL8 207 aa27.07■■□□□ 1.92
SREBF1-212ENST00000478616 SBNO1A3KN83 1393 aa27.07■■□□□ 1.92
SREBF1-212ENST00000478616 GPRASP1Q5JY77 1395 aa27.06■■□□□ 1.92
SREBF1-212ENST00000478616 CDK19Q9BWU1 502 aa27.05■■□□□ 1.92
SREBF1-212ENST00000478616 EIF3AQ14152 1382 aaKnown RBP27.05■■□□□ 1.92
SREBF1-212ENST00000478616 ZNF772Q68DY9 489 aaPredicted RBP27.04■■□□□ 1.92
SREBF1-212ENST00000478616 NUDT16Q96DE0 195 aaKnown RBP27.04■■□□□ 1.92
SREBF1-212ENST00000478616 CENPJQ9HC77 1338 aaPredicted RBP27.03■■□□□ 1.92
SREBF1-212ENST00000478616 FNBP4Q8N3X1 1017 aaPredicted RBP27■■□□□ 1.91
SREBF1-212ENST00000478616 BCL9LQ86UU0 1499 aa27■■□□□ 1.91
SREBF1-212ENST00000478616 ROCK2O75116 1388 aaKnown RBP26.99■■□□□ 1.91
SREBF1-212ENST00000478616 RALGAPBQ86X10 1494 aa26.99■■□□□ 1.91
SREBF1-212ENST00000478616 PSME1Q06323 249 aa26.98■■□□□ 1.91
SREBF1-212ENST00000478616 CABLES1Q8TDN4 633 aa26.98■■□□□ 1.91
SREBF1-212ENST00000478616 POLR3AO14802 1390 aaPredicted RBP26.97■■□□□ 1.91
SREBF1-212ENST00000478616 NGLY1Q96IV0 654 aa26.97■■□□□ 1.91
SREBF1-212ENST00000478616 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.96■■□□□ 1.91
SREBF1-212ENST00000478616 SLIT2O94813 1529 aa26.95■■□□□ 1.91
SREBF1-212ENST00000478616 ATRNO75882 1429 aa26.94■■□□□ 1.9
SREBF1-212ENST00000478616 PLCH1Q4KWH8 1693 aa26.94■■□□□ 1.9
SREBF1-212ENST00000478616 TONSLQ96HA7 1378 aa26.94■■□□□ 1.9
SREBF1-212ENST00000478616 CDK12Q9NYV4 1490 aaPredicted RBP26.93■■□□□ 1.9
SREBF1-212ENST00000478616 PLEKHG3A1L390 1219 aa26.93■■□□□ 1.9
SREBF1-212ENST00000478616 QTRT2Q9H974 415 aaKnown RBP26.93■■□□□ 1.9
SREBF1-212ENST00000478616 CABP2Q9NPB3 220 aa26.93■■□□□ 1.9
SREBF1-212ENST00000478616 CCDC61Q9Y6R9 512 aa26.92■■□□□ 1.9
SREBF1-212ENST00000478616 ARHGEF10O15013 1369 aa26.92■■□□□ 1.9
SREBF1-212ENST00000478616 RGS12O14924 1447 aa26.91■■□□□ 1.9
SREBF1-212ENST00000478616 RXRBP28702 533 aa26.91■■□□□ 1.9
SREBF1-212ENST00000478616 ACEP12821 1306 aa26.9■■□□□ 1.9
SREBF1-212ENST00000478616 NGDNQ8NEJ9 315 aaKnown RBP26.9■■□□□ 1.9
SREBF1-212ENST00000478616 USP21Q9UK80 565 aa26.9■■□□□ 1.9
SREBF1-212ENST00000478616 PHRF1Q9P1Y6 1649 aaKnown RBP26.9■■□□□ 1.9
SREBF1-212ENST00000478616 PPIP5K1Q6PFW1 1433 aa26.89■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms