RNA–Protein interactions for RNA: ENST00000478563.1

CDK13-204, Transcript of cyclin dependent kinase 13, humanhuman

TSL 4

Gene CDK13, Length 700 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK13-204ENST00000478563 NR1I2O75469 434 aa11.71□□□□□ -0.53
CDK13-204ENST00000478563 FUT2Q10981 343 aa11.71□□□□□ -0.53
CDK13-204ENST00000478563 MORN1Q5T089 497 aa11.71□□□□□ -0.53
CDK13-204ENST00000478563 SULF1Q8IWU6 871 aa11.71□□□□□ -0.53
CDK13-204ENST00000478563 AK7Q96M32 723 aa11.71□□□□□ -0.53
CDK13-204ENST00000478563 ADH1BP00325 375 aa11.7□□□□□ -0.54
CDK13-204ENST00000478563 FOXC1Q12948 553 aa11.7□□□□□ -0.54
CDK13-204ENST00000478563 CRIPAKQ8N1N5 446 aa11.7□□□□□ -0.54
CDK13-204ENST00000478563 GMPR2Q9P2T1 348 aaKnown RBP11.7□□□□□ -0.54
CDK13-204ENST00000478563 STK17AQ9UEE5 414 aa11.7□□□□□ -0.54
CDK13-204ENST00000478563 CD46P15529 392 aa11.69□□□□□ -0.54
CDK13-204ENST00000478563 NFX1Q12986 1120 aaKnown RBP11.69□□□□□ -0.54
CDK13-204ENST00000478563 KRI1Q8N9T8 703 aaKnown RBP11.68□□□□□ -0.54
CDK13-204ENST00000478563 ATP6V1AP38606 617 aa11.67□□□□□ -0.54
CDK13-204ENST00000478563 THAP11Q96EK4 314 aa11.67□□□□□ -0.54
CDK13-204ENST00000478563 SLC6A16Q9GZN6 736 aa11.67□□□□□ -0.54
CDK13-204ENST00000478563 C11orf95C9JLR9 678 aaPredicted RBP11.66□□□□□ -0.54
CDK13-204ENST00000478563 MDM2Q00987 491 aaPredicted RBP11.66□□□□□ -0.54
CDK13-204ENST00000478563 IL27Q8NEV9 243 aa11.66□□□□□ -0.54
CDK13-204ENST00000478563 WIPF1O43516 503 aa11.65□□□□□ -0.54
CDK13-204ENST00000478563 AVPP01185 164 aa11.65□□□□□ -0.54
CDK13-204ENST00000478563 SLC27A5Q9Y2P5 690 aa11.65□□□□□ -0.54
CDK13-204ENST00000478563 LCE2CQ5TA81 110 aa11.64□□□□□ -0.55
CDK13-204ENST00000478563 SPSB2Q99619 263 aa11.63□□□□□ -0.55
CDK13-204ENST00000478563 TOR4AQ9NXH8 423 aa11.63□□□□□ -0.55
CDK13-204ENST00000478563 REPIN1Q9BWE0 567 aaKnown RBP11.62□□□□□ -0.55
CDK13-204ENST00000478563 KDM4CQ9H3R0 1056 aa11.62□□□□□ -0.55
CDK13-204ENST00000478563 AXIN1O15169 862 aa11.61□□□□□ -0.55
CDK13-204ENST00000478563 FAM217BQ9NTX9 383 aaPredicted RBP11.61□□□□□ -0.55
CDK13-204ENST00000478563 SALL2Q9Y467 1007 aaPredicted RBP11.61□□□□□ -0.55
CDK13-204ENST00000478563 BRICD5Q6PL45 260 aa11.6□□□□□ -0.55
CDK13-204ENST00000478563 FAM160A2Q8N612 972 aaPredicted RBP11.6□□□□□ -0.55
CDK13-204ENST00000478563 GPCPD1Q9NPB8 672 aa11.6□□□□□ -0.55
CDK13-204ENST00000478563 INSM1Q01101 510 aaPredicted RBP11.59□□□□□ -0.55
CDK13-204ENST00000478563 ZMYND15Q9H091 742 aa11.58□□□□□ -0.56
CDK13-204ENST00000478563 TRIM66O15016 1216 aa11.57□□□□□ -0.56
CDK13-204ENST00000478563 CLCN1P35523 988 aa11.57□□□□□ -0.56
CDK13-204ENST00000478563 PDE4DQ08499 809 aa11.57□□□□□ -0.56
CDK13-204ENST00000478563 RNF19BQ6ZMZ0 732 aa11.57□□□□□ -0.56
CDK13-204ENST00000478563 KDM4AO75164 1064 aa11.56□□□□□ -0.56
CDK13-204ENST00000478563 FMNL1O95466 1100 aaPredicted RBP11.56□□□□□ -0.56
CDK13-204ENST00000478563 RPIAP49247 311 aa11.55□□□□□ -0.56
CDK13-204ENST00000478563 SMCPP49901 116 aaPredicted RBP11.55□□□□□ -0.56
CDK13-204ENST00000478563 CTC1Q2NKJ3 1217 aa11.55□□□□□ -0.56
CDK13-204ENST00000478563 CYP4X1Q8N118 509 aa11.55□□□□□ -0.56
CDK13-204ENST00000478563 HLA-CQ95604 372 aa11.55□□□□□ -0.56
CDK13-204ENST00000478563 PRDM9Q9NQV7 894 aa11.54□□□□□ -0.56
CDK13-204ENST00000478563 UBTFP17480 764 aaKnown RBP11.53□□□□□ -0.56
CDK13-204ENST00000478563 AMHR2Q16671 573 aa11.53□□□□□ -0.56
CDK13-204ENST00000478563 GRIPAP1Q4V328 841 aa11.53□□□□□ -0.56
CDK13-204ENST00000478563 RSPH6AQ9H0K4 717 aa11.53□□□□□ -0.56
CDK13-204ENST00000478563 SNRPBP14678 240 aaKnown RBP11.52□□□□□ -0.57
CDK13-204ENST00000478563 MSS51Q4VC12 460 aa11.52□□□□□ -0.57
CDK13-204ENST00000478563 LOC100996750A0A140TA64 210 aa11.51□□□□□ -0.57
CDK13-204ENST00000478563 HOXA2O43364 376 aa11.51□□□□□ -0.57
CDK13-204ENST00000478563 USP46P62068 366 aa11.51□□□□□ -0.57
CDK13-204ENST00000478563 KRTAP4-6Q9BYQ5 205 aa11.51□□□□□ -0.57
CDK13-204ENST00000478563 CD2BP2O95400 341 aaKnown RBP11.5□□□□□ -0.57
CDK13-204ENST00000478563 FCF1Q9Y324 198 aaKnown RBP11.5□□□□□ -0.57
CDK13-204ENST00000478563 TERTO14746 1132 aaKnown RBP11.49□□□□□ -0.57
CDK13-204ENST00000478563 SSTR3P32745 418 aaPredicted RBP11.48□□□□□ -0.57
CDK13-204ENST00000478563 GUCA2AQ02747 115 aa11.48□□□□□ -0.57
CDK13-204ENST00000478563 Q3C1V9 767 aa11.48□□□□□ -0.57
CDK13-204ENST00000478563 PODXL2Q9NZ53 605 aa11.48□□□□□ -0.57
CDK13-204ENST00000478563 MMP16P51512 607 aa11.46□□□□□ -0.57
CDK13-204ENST00000478563 FAM117AQ9C073 453 aa11.46□□□□□ -0.57
CDK13-204ENST00000478563 ATP13A2Q9NQ11 1180 aa11.46□□□□□ -0.57
CDK13-204ENST00000478563 TTC24A2A3L6 582 aaPredicted RBP11.44□□□□□ -0.58
CDK13-204ENST00000478563 SMPD1P17405 629 aa11.44□□□□□ -0.58
CDK13-204ENST00000478563 GIGYF2Q6Y7W6 1299 aaKnown RBP11.44□□□□□ -0.58
CDK13-204ENST00000478563 USB1Q9BQ65 265 aaKnown RBP11.44□□□□□ -0.58
CDK13-204ENST00000478563 DXOO77932 396 aaKnown RBP11.43□□□□□ -0.58
CDK13-204ENST00000478563 TTLL12Q14166 644 aaPredicted RBP11.42□□□□□ -0.58
CDK13-204ENST00000478563 PARP9Q8IXQ6 854 aa11.42□□□□□ -0.58
CDK13-204ENST00000478563 SPIRE2Q8WWL2 714 aa11.42□□□□□ -0.58
CDK13-204ENST00000478563 TRIM47Q96LD4 638 aa11.42□□□□□ -0.58
CDK13-204ENST00000478563 PCDHGC3Q9UN70 934 aa11.42□□□□□ -0.58
CDK13-204ENST00000478563 SYMPKQ92797 1274 aaKnown RBP11.41□□□□□ -0.58
CDK13-204ENST00000478563 ARID3AQ99856 593 aa11.41□□□□□ -0.58
CDK13-204ENST00000478563 NUTM1Q86Y26 1132 aa11.4□□□□□ -0.58
CDK13-204ENST00000478563 PLEKHG3A1L390 1219 aa11.38□□□□□ -0.59
CDK13-204ENST00000478563 MS4A1P11836 297 aa11.38□□□□□ -0.59
CDK13-204ENST00000478563 J3QL48 77 aa11.37□□□□□ -0.59
CDK13-204ENST00000478563 FDX1P10109 184 aa11.37□□□□□ -0.59
CDK13-204ENST00000478563 SNIP1Q8TAD8 396 aaKnown RBP11.37□□□□□ -0.59
CDK13-204ENST00000478563 DDRGK1Q96HY6 314 aa11.37□□□□□ -0.59
CDK13-204ENST00000478563 MOXD2PA6NHM9 499 aa11.36□□□□□ -0.59
CDK13-204ENST00000478563 WNT7AO00755 349 aa11.36□□□□□ -0.59
CDK13-204ENST00000478563 NDUFV2P19404 249 aa11.36□□□□□ -0.59
CDK13-204ENST00000478563 LORP23490 312 aaPredicted RBP11.36□□□□□ -0.59
CDK13-204ENST00000478563 BEGAINQ9BUH8 593 aa11.36□□□□□ -0.59
CDK13-204ENST00000478563 SENP2Q9HC62 589 aa11.36□□□□□ -0.59
CDK13-204ENST00000478563 C1orf115Q9H7X2 142 aa11.35□□□□□ -0.59
CDK13-204ENST00000478563 RETREG3Q86VR2 466 aa11.34□□□□□ -0.59
CDK13-204ENST00000478563 JUNDP17535 347 aa11.33□□□□□ -0.6
CDK13-204ENST00000478563 HPS1Q92902 700 aa11.33□□□□□ -0.6
CDK13-204ENST00000478563 ARID3CA6NKF2 412 aa11.32□□□□□ -0.6
CDK13-204ENST00000478563 TRIM26Q12899 539 aaPredicted RBP11.32□□□□□ -0.6
CDK13-204ENST00000478563 MRGPRX2Q96LB1 330 aa11.32□□□□□ -0.6
CDK13-204ENST00000478563 ZBTB24O43167 697 aaPredicted RBP11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms