RNA–Protein interactions for RNA: ENST00000477748.1

PDE6D-204, Transcript of phosphodiesterase 6D, humanhuman

TSL 1 (best)

Gene PDE6D, Length 996 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6D-204ENST00000477748 TRIM26Q12899 539 aaPredicted RBP20.59■□□□□ 0.89
PDE6D-204ENST00000477748 TMEM132EQ6IEE7 984 aa20.58■□□□□ 0.89
PDE6D-204ENST00000477748 DCAF11Q8TEB1 546 aa20.58■□□□□ 0.89
PDE6D-204ENST00000477748 DDX17Q92841 729 aaKnown RBP20.58■□□□□ 0.89
PDE6D-204ENST00000477748 C14orf93Q9H972 538 aaKnown RBP20.58■□□□□ 0.89
PDE6D-204ENST00000477748 STK26Q9P289 416 aa20.58■□□□□ 0.89
PDE6D-204ENST00000477748 KDM2AQ9Y2K7 1162 aa20.58■□□□□ 0.89
PDE6D-204ENST00000477748 YTHDC2Q9H6S0 1430 aaKnown RBP20.58■□□□□ 0.88
PDE6D-204ENST00000477748 SOS2Q07890 1332 aaPredicted RBP20.57■□□□□ 0.88
PDE6D-204ENST00000477748 NUTM2BA6NNL0 878 aaPredicted RBP20.57■□□□□ 0.88
PDE6D-204ENST00000477748 NUTM2EB1AL46 878 aaPredicted RBP20.57■□□□□ 0.88
PDE6D-204ENST00000477748 NUTM2AQ8IVF1 878 aaPredicted RBP20.57■□□□□ 0.88
PDE6D-204ENST00000477748 UPF1Q92900 1129 aaKnown RBP eCLIP20.57■□□□□ 0.88
PDE6D-204ENST00000477748 ORAI2Q96SN7 254 aa20.57■□□□□ 0.88
PDE6D-204ENST00000477748 CFAP70Q5T0N1 1121 aa20.56■□□□□ 0.88
PDE6D-204ENST00000477748 WAPLQ7Z5K2 1190 aa20.54■□□□□ 0.88
PDE6D-204ENST00000477748 SIRT1Q96EB6 747 aa20.54■□□□□ 0.88
PDE6D-204ENST00000477748 STAC3Q96MF2 364 aa20.54■□□□□ 0.88
PDE6D-204ENST00000477748 NPHP3Q7Z494 1330 aa20.53■□□□□ 0.88
PDE6D-204ENST00000477748 DHX57Q6P158 1386 aaKnown RBP20.53■□□□□ 0.88
PDE6D-204ENST00000477748 PLEKHH1Q9ULM0 1364 aa20.52■□□□□ 0.88
PDE6D-204ENST00000477748 ESCO1Q5FWF5 840 aa20.52■□□□□ 0.88
PDE6D-204ENST00000477748 AFF2P51816 1311 aa20.51■□□□□ 0.87
PDE6D-204ENST00000477748 RXRBP28702 533 aa20.48■□□□□ 0.87
PDE6D-204ENST00000477748 C8orf37Q96NL8 207 aa20.48■□□□□ 0.87
PDE6D-204ENST00000477748 PXDNQ92626 1479 aa20.48■□□□□ 0.87
PDE6D-204ENST00000477748 CDK12Q9NYV4 1490 aaPredicted RBP20.48■□□□□ 0.87
PDE6D-204ENST00000477748 COL22A1Q8NFW1 1626 aaPredicted RBP20.47■□□□□ 0.87
PDE6D-204ENST00000477748 DLC1Q96QB1 1528 aa20.47■□□□□ 0.87
PDE6D-204ENST00000477748 FMN2Q9NZ56 1722 aa20.47■□□□□ 0.87
PDE6D-204ENST00000477748 KIF1AQ12756 1690 aa20.45■□□□□ 0.86
PDE6D-204ENST00000477748 ADGRB1O14514 1584 aa20.44■□□□□ 0.86
PDE6D-204ENST00000477748 FOXO3O43524 673 aa20.44■□□□□ 0.86
PDE6D-204ENST00000477748 ADAMTS2O95450 1211 aa20.44■□□□□ 0.86
PDE6D-204ENST00000477748 SIN3AQ96ST3 1273 aa20.44■□□□□ 0.86
PDE6D-204ENST00000477748 NUTM2FA1L443 756 aa20.43■□□□□ 0.86
PDE6D-204ENST00000477748 PRAM1Q96QH2 718 aa20.43■□□□□ 0.86
PDE6D-204ENST00000477748 NEUROD1Q13562 356 aa20.42■□□□□ 0.86
PDE6D-204ENST00000477748 NGLY1Q96IV0 654 aa20.42■□□□□ 0.86
PDE6D-204ENST00000477748 POGKQ9P215 609 aa20.41■□□□□ 0.86
PDE6D-204ENST00000477748 TRAK1Q9UPV9 953 aa20.41■□□□□ 0.86
PDE6D-204ENST00000477748 SAFB2Q14151 953 aaKnown RBP eCLIP20.4■□□□□ 0.86
PDE6D-204ENST00000477748 ADGRB2O60241 1585 aa20.39■□□□□ 0.85
PDE6D-204ENST00000477748 RBM6P78332 1123 aaKnown RBP20.39■□□□□ 0.85
PDE6D-204ENST00000477748 XPCQ01831 940 aaPredicted RBP20.39■□□□□ 0.85
PDE6D-204ENST00000477748 QTRT2Q9H974 415 aaKnown RBP20.39■□□□□ 0.85
PDE6D-204ENST00000477748 ANKARQ7Z5J8 1434 aa20.38■□□□□ 0.85
PDE6D-204ENST00000477748 L3MBTL2Q969R5 705 aa20.38■□□□□ 0.85
PDE6D-204ENST00000477748 KIAA1210Q9ULL0 1709 aa20.38■□□□□ 0.85
PDE6D-204ENST00000477748 FNBP4Q8N3X1 1017 aaPredicted RBP20.37■□□□□ 0.85
PDE6D-204ENST00000477748 PHF8Q9UPP1 1060 aa20.37■□□□□ 0.85
PDE6D-204ENST00000477748 EIF3AQ14152 1382 aaKnown RBP20.36■□□□□ 0.85
PDE6D-204ENST00000477748 SPATA31A3Q5VYP0 1347 aa20.36■□□□□ 0.85
PDE6D-204ENST00000477748 USP21Q9UK80 565 aa20.36■□□□□ 0.85
PDE6D-204ENST00000477748 TRPC5Q9UL62 973 aaPredicted RBP20.35■□□□□ 0.85
PDE6D-204ENST00000477748 RGS12O14924 1447 aa20.35■□□□□ 0.85
PDE6D-204ENST00000477748 PSME1Q06323 249 aa20.34■□□□□ 0.85
PDE6D-204ENST00000477748 KRT28Q7Z3Y7 464 aa20.34■□□□□ 0.85
PDE6D-204ENST00000477748 TNS3Q68CZ2 1445 aa20.33■□□□□ 0.84
PDE6D-204ENST00000477748 ARHGEF28Q8N1W1 1705 aaKnown RBP20.33■□□□□ 0.84
PDE6D-204ENST00000477748 NBPF1Q3BBV0 1214 aa20.32■□□□□ 0.84
PDE6D-204ENST00000477748 ATRNO75882 1429 aa20.32■□□□□ 0.84
PDE6D-204ENST00000477748 SBNO1A3KN83 1393 aa20.32■□□□□ 0.84
PDE6D-204ENST00000477748 RGPD8O14715 1765 aaPredicted RBP20.31■□□□□ 0.84
PDE6D-204ENST00000477748 MINK1Q8N4C8 1332 aaPredicted RBP20.3■□□□□ 0.84
PDE6D-204ENST00000477748 ARHGEF10O15013 1369 aa20.3■□□□□ 0.84
PDE6D-204ENST00000477748 TULP4Q9NRJ4 1543 aa20.29■□□□□ 0.84
PDE6D-204ENST00000477748 USP32Q8NFA0 1604 aa20.29■□□□□ 0.84
PDE6D-204ENST00000477748 HIRIP3Q9BW71 556 aaPredicted RBP20.29■□□□□ 0.84
PDE6D-204ENST00000477748 MARF1Q9Y4F3 1742 aaKnown RBP20.29■□□□□ 0.84
PDE6D-204ENST00000477748 BCL9LQ86UU0 1499 aa20.28■□□□□ 0.84
PDE6D-204ENST00000477748 WASLO00401 505 aaPredicted RBP20.27■□□□□ 0.84
PDE6D-204ENST00000477748 SRCAPQ6ZRS2 3230 aa20.27■□□□□ 0.84
PDE6D-204ENST00000477748 TONSLQ96HA7 1378 aa20.25■□□□□ 0.83
PDE6D-204ENST00000477748 PCGF6Q9BYE7 350 aa20.25■□□□□ 0.83
PDE6D-204ENST00000477748 TRPM1Q7Z4N2 1603 aa20.24■□□□□ 0.83
PDE6D-204ENST00000477748 GPRASP1Q5JY77 1395 aa20.24■□□□□ 0.83
PDE6D-204ENST00000477748 SLIT2O94813 1529 aa20.24■□□□□ 0.83
PDE6D-204ENST00000477748 HAP1P54257 671 aaPredicted RBP20.24■□□□□ 0.83
PDE6D-204ENST00000477748 PMFBP1Q8TBY8 1022 aa20.24■□□□□ 0.83
PDE6D-204ENST00000477748 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.24■□□□□ 0.83
PDE6D-204ENST00000477748 PRR36Q9H6K5 1346 aa20.24■□□□□ 0.83
PDE6D-204ENST00000477748 ATAD2Q6PL18 1390 aa20.23■□□□□ 0.83
PDE6D-204ENST00000477748 UNC5CLQ8IV45 518 aa20.22■□□□□ 0.83
PDE6D-204ENST00000477748 EP400Q96L91 3159 aa20.21■□□□□ 0.83
PDE6D-204ENST00000477748 LMOD2Q6P5Q4 547 aa20.21■□□□□ 0.83
PDE6D-204ENST00000477748 GJD4Q96KN9 370 aaPredicted RBP20.21■□□□□ 0.83
PDE6D-204ENST00000477748 ATP7BP35670 1465 aa20.2■□□□□ 0.82
PDE6D-204ENST00000477748 ROCK2O75116 1388 aaKnown RBP20.2■□□□□ 0.82
PDE6D-204ENST00000477748 NBPF8Q3BBV2 869 aa20.19■□□□□ 0.82
PDE6D-204ENST00000477748 CENPJQ9HC77 1338 aaPredicted RBP20.19■□□□□ 0.82
PDE6D-204ENST00000477748 ABCA3Q99758 1704 aa20.19■□□□□ 0.82
PDE6D-204ENST00000477748 TRPM3Q9HCF6 1732 aaPredicted RBP20.19■□□□□ 0.82
PDE6D-204ENST00000477748 NGDNQ8NEJ9 315 aaKnown RBP20.18■□□□□ 0.82
PDE6D-204ENST00000477748 CABLES1Q8TDN4 633 aa20.18■□□□□ 0.82
PDE6D-204ENST00000477748 ITSN1Q15811 1721 aa20.17■□□□□ 0.82
PDE6D-204ENST00000477748 CDK19Q9BWU1 502 aa20.17■□□□□ 0.82
PDE6D-204ENST00000477748 RALGAPBQ86X10 1494 aa20.17■□□□□ 0.82
PDE6D-204ENST00000477748 QRICH2Q9H0J4 1663 aa20.16■□□□□ 0.82
PDE6D-204ENST00000477748 NUDT16Q96DE0 195 aaKnown RBP20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms