RNA–Protein interactions for RNA: ENST00000477702.1

LINC00173-202, long intergenic non-protein coding RNA 173, humanhuman

TSL 3

Gene LINC00173, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-202ENST00000477702 SYCP2Q9BX26 1530 aa10.16□□□□□ -0.78
LINC00173-202ENST00000477702 MED14O60244 1454 aa10.14□□□□□ -0.79
LINC00173-202ENST00000477702 LRRIQ1Q96JM4 1722 aa10.13□□□□□ -0.79
LINC00173-202ENST00000477702 ARHGEF1Q92888 912 aaKnown RBP10.13□□□□□ -0.79
LINC00173-202ENST00000477702 TRIM52Q96A61 297 aa10.13□□□□□ -0.79
LINC00173-202ENST00000477702 CDC42BPAQ5VT25 1732 aa10.13□□□□□ -0.79
LINC00173-202ENST00000477702 ARHGAP35Q9NRY4 1499 aa10.12□□□□□ -0.79
LINC00173-202ENST00000477702 FAM135AQ9P2D6 1515 aa10.12□□□□□ -0.79
LINC00173-202ENST00000477702 IQGAP1P46940 1657 aa10.12□□□□□ -0.79
LINC00173-202ENST00000477702 DEPDC5O75140 1603 aa10.11□□□□□ -0.79
LINC00173-202ENST00000477702 SYNMO15061 1565 aa10.11□□□□□ -0.79
LINC00173-202ENST00000477702 INO80Q9ULG1 1556 aaPredicted RBP10.11□□□□□ -0.79
LINC00173-202ENST00000477702 DPYSL4O14531 572 aa10.11□□□□□ -0.79
LINC00173-202ENST00000477702 UBTFP17480 764 aaKnown RBP10.11□□□□□ -0.79
LINC00173-202ENST00000477702 UGGT1Q9NYU2 1555 aa10.1□□□□□ -0.79
LINC00173-202ENST00000477702 MIA2Q96PC5 1412 aa10.1□□□□□ -0.79
LINC00173-202ENST00000477702 PZPP20742 1482 aa10.1□□□□□ -0.79
LINC00173-202ENST00000477702 FAM135BQ49AJ0 1406 aa10.09□□□□□ -0.79
LINC00173-202ENST00000477702 SEMA3EO15041 775 aa10.09□□□□□ -0.79
LINC00173-202ENST00000477702 KIF3BO15066 747 aa10.09□□□□□ -0.79
LINC00173-202ENST00000477702 WASHC2CQ9Y4E1 1318 aa10.08□□□□□ -0.8
LINC00173-202ENST00000477702 GPATCH8Q9UKJ3 1502 aaKnown RBP10.08□□□□□ -0.8
LINC00173-202ENST00000477702 SLAIN1Q8ND83 568 aa10.08□□□□□ -0.8
LINC00173-202ENST00000477702 CFDP1Q9UEE9 299 aaPredicted RBP10.08□□□□□ -0.8
LINC00173-202ENST00000477702 NLRP1Q9C000 1473 aa10.08□□□□□ -0.8
LINC00173-202ENST00000477702 EEA1Q15075 1411 aa10.07□□□□□ -0.8
LINC00173-202ENST00000477702 RBM33Q96EV2 1170 aaKnown RBP10.07□□□□□ -0.8
LINC00173-202ENST00000477702 ARIH1Q9Y4X5 557 aaPredicted RBP10.07□□□□□ -0.8
LINC00173-202ENST00000477702 KIAA1107Q9UPP5 1409 aa10.07□□□□□ -0.8
LINC00173-202ENST00000477702 ADGBQ8N7X0 1667 aa10.06□□□□□ -0.8
LINC00173-202ENST00000477702 XIRP1Q702N8 1843 aaKnown RBP10.06□□□□□ -0.8
LINC00173-202ENST00000477702 ZNF644Q9H582 1327 aaPredicted RBP10.06□□□□□ -0.8
LINC00173-202ENST00000477702 DHX29Q7Z478 1369 aaKnown RBP10.05□□□□□ -0.8
LINC00173-202ENST00000477702 SCUBE2Q9NQ36 999 aa10.05□□□□□ -0.8
LINC00173-202ENST00000477702 KDM5DQ9BY66 1539 aa10.05□□□□□ -0.8
LINC00173-202ENST00000477702 ROBO1Q9Y6N7 1651 aa10.05□□□□□ -0.8
LINC00173-202ENST00000477702 PLEKHH2Q8IVE3 1493 aa10.04□□□□□ -0.8
LINC00173-202ENST00000477702 TMEM94Q12767 1356 aa10.04□□□□□ -0.8
LINC00173-202ENST00000477702 ZC3H13Q5T200 1668 aaKnown RBP10.04□□□□□ -0.8
LINC00173-202ENST00000477702 LTKP29376 864 aa10.04□□□□□ -0.8
LINC00173-202ENST00000477702 MEX3CQ5U5Q3 659 aaKnown RBP10.04□□□□□ -0.8
LINC00173-202ENST00000477702 OXER1Q8TDS5 423 aa10.04□□□□□ -0.8
LINC00173-202ENST00000477702 CCDC18Q5T9S5 1454 aa10.04□□□□□ -0.8
LINC00173-202ENST00000477702 PRKCSHP14314 528 aaPredicted RBP10.03□□□□□ -0.8
LINC00173-202ENST00000477702 TXNDC2Q86VQ3 553 aa10.03□□□□□ -0.8
LINC00173-202ENST00000477702 OTUD5Q96G74 571 aa10.03□□□□□ -0.8
LINC00173-202ENST00000477702 CCNB3Q8WWL7 1395 aa10.02□□□□□ -0.8
LINC00173-202ENST00000477702 JCADQ9P266 1359 aa10.02□□□□□ -0.8
LINC00173-202ENST00000477702 CASKIN1Q8WXD9 1431 aa10.02□□□□□ -0.81
LINC00173-202ENST00000477702 MLLT3P42568 568 aaPredicted RBP10.02□□□□□ -0.81
LINC00173-202ENST00000477702 MAP3K9P80192 1104 aa10.02□□□□□ -0.81
LINC00173-202ENST00000477702 ZNF772Q68DY9 489 aaPredicted RBP10.02□□□□□ -0.81
LINC00173-202ENST00000477702 MAMSTRQ6ZN01 415 aa10.02□□□□□ -0.81
LINC00173-202ENST00000477702 SCAF11Q99590 1463 aaKnown RBP10.02□□□□□ -0.81
LINC00173-202ENST00000477702 LRP6O75581 1613 aa10.01□□□□□ -0.81
LINC00173-202ENST00000477702 TESPA1A2RU30 521 aaPredicted RBP10.01□□□□□ -0.81
LINC00173-202ENST00000477702 RXRBP28702 533 aa10.01□□□□□ -0.81
LINC00173-202ENST00000477702 LHX8Q68G74 356 aa10.01□□□□□ -0.81
LINC00173-202ENST00000477702 PROSER2Q86WR7 435 aaPredicted RBP10.01□□□□□ -0.81
LINC00173-202ENST00000477702 PHLPP1O60346 1717 aa9.99□□□□□ -0.81
LINC00173-202ENST00000477702 HOXB3P14651 431 aaPredicted RBP9.99□□□□□ -0.81
LINC00173-202ENST00000477702 PDIA6Q15084 440 aa9.99□□□□□ -0.81
LINC00173-202ENST00000477702 RTEL1-TNFRSF6BF6WH68 1400 aa9.99□□□□□ -0.81
LINC00173-202ENST00000477702 MBD5Q9P267 1494 aa9.98□□□□□ -0.81
LINC00173-202ENST00000477702 PTCD2Q8WV60 388 aaKnown RBP9.98□□□□□ -0.81
LINC00173-202ENST00000477702 SLAIN2Q9P270 581 aa9.98□□□□□ -0.81
LINC00173-202ENST00000477702 NCOA2Q15596 1464 aa9.98□□□□□ -0.81
LINC00173-202ENST00000477702 MAP3K1Q13233 1512 aa9.97□□□□□ -0.81
LINC00173-202ENST00000477702 SLC34A2O95436 690 aa9.97□□□□□ -0.81
LINC00173-202ENST00000477702 TPRNQ4KMQ1 711 aa9.97□□□□□ -0.81
LINC00173-202ENST00000477702 KHSRPQ92945 711 aaKnown RBP eCLIP9.97□□□□□ -0.81
LINC00173-202ENST00000477702 EID1Q9Y6B2 187 aa9.97□□□□□ -0.81
LINC00173-202ENST00000477702 ERVK-7P63135 1459 aa9.97□□□□□ -0.81
LINC00173-202ENST00000477702 LRRC9Q6ZRR7 1453 aa9.97□□□□□ -0.81
LINC00173-202ENST00000477702 UBR1Q8IWV7 1749 aa9.96□□□□□ -0.81
LINC00173-202ENST00000477702 NUTM2BA6NNL0 878 aaPredicted RBP9.96□□□□□ -0.82
LINC00173-202ENST00000477702 NUTM2EB1AL46 878 aaPredicted RBP9.96□□□□□ -0.82
LINC00173-202ENST00000477702 KCNA6P17658 529 aa9.96□□□□□ -0.82
LINC00173-202ENST00000477702 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.96□□□□□ -0.82
LINC00173-202ENST00000477702 NUTM2AQ8IVF1 878 aaPredicted RBP9.96□□□□□ -0.82
LINC00173-202ENST00000477702 SLC26A8Q96RN1 970 aa9.96□□□□□ -0.82
LINC00173-202ENST00000477702 PCDHGA4Q9Y5G9 962 aa9.96□□□□□ -0.82
LINC00173-202ENST00000477702 SPATA31A6Q5VVP1 1343 aa9.96□□□□□ -0.82
LINC00173-202ENST00000477702 SPDYE16A6NNV3 312 aaPredicted RBP9.95□□□□□ -0.82
LINC00173-202ENST00000477702 EVI5O60447 810 aa9.95□□□□□ -0.82
LINC00173-202ENST00000477702 ARHGAP23Q9P227 1491 aa9.95□□□□□ -0.82
LINC00173-202ENST00000477702 CFAP65Q6ZU64 1925 aaKnown RBP9.94□□□□□ -0.82
LINC00173-202ENST00000477702 COL16A1Q07092 1604 aaPredicted RBP9.94□□□□□ -0.82
LINC00173-202ENST00000477702 ABCC3O15438 1527 aa9.94□□□□□ -0.82
LINC00173-202ENST00000477702 MSH6P52701 1360 aa9.94□□□□□ -0.82
LINC00173-202ENST00000477702 NUTM2DQ5VT03 806 aaPredicted RBP9.94□□□□□ -0.82
LINC00173-202ENST00000477702 LMOD2Q6P5Q4 547 aa9.94□□□□□ -0.82
LINC00173-202ENST00000477702 SLIT1O75093 1534 aa9.93□□□□□ -0.82
LINC00173-202ENST00000477702 FYCO1Q9BQS8 1478 aa9.93□□□□□ -0.82
LINC00173-202ENST00000477702 AFF2P51816 1311 aa9.93□□□□□ -0.82
LINC00173-202ENST00000477702 CDK12Q9NYV4 1490 aaPredicted RBP9.92□□□□□ -0.82
LINC00173-202ENST00000477702 RGS12O14924 1447 aa9.92□□□□□ -0.82
LINC00173-202ENST00000477702 MTUS2Q5JR59 1369 aa9.92□□□□□ -0.82
LINC00173-202ENST00000477702 ARSIQ5FYB1 569 aa9.92□□□□□ -0.82
LINC00173-202ENST00000477702 DDX12PQ92771 950 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms