RNA–Protein interactions for RNA: ENST00000477347.1

RPSAP55-201, Transcript of ribosomal protein SA pseudogene 55, humanhuman

BASIC

Gene RPSAP55, Length 876 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPSAP55-201ENST00000477347 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.57□□□□□ -0.24
RPSAP55-201ENST00000477347 SRPK2P78362 688 aaKnown RBP13.57□□□□□ -0.24
RPSAP55-201ENST00000477347 RBM33Q96EV2 1170 aaKnown RBP13.57□□□□□ -0.24
RPSAP55-201ENST00000477347 EVC2Q86UK5 1308 aa13.57□□□□□ -0.24
RPSAP55-201ENST00000477347 NWD1Q149M9 1564 aa13.57□□□□□ -0.24
RPSAP55-201ENST00000477347 PIK3R4Q99570 1358 aa13.57□□□□□ -0.24
RPSAP55-201ENST00000477347 SBNO2Q9Y2G9 1366 aa13.57□□□□□ -0.24
RPSAP55-201ENST00000477347 PTCH1Q13635 1447 aa13.56□□□□□ -0.24
RPSAP55-201ENST00000477347 FAM135BQ49AJ0 1406 aa13.56□□□□□ -0.24
RPSAP55-201ENST00000477347 CABP2Q9NPB3 220 aa13.56□□□□□ -0.24
RPSAP55-201ENST00000477347 CDCA8Q53HL2 280 aa13.55□□□□□ -0.24
RPSAP55-201ENST00000477347 TMC1Q8TDI8 760 aa13.55□□□□□ -0.24
RPSAP55-201ENST00000477347 NALCNQ8IZF0 1738 aa13.55□□□□□ -0.24
RPSAP55-201ENST00000477347 STRCP1A6NGW2 1772 aa13.55□□□□□ -0.24
RPSAP55-201ENST00000477347 AEBP2Q6ZN18 517 aaPredicted RBP13.54□□□□□ -0.24
RPSAP55-201ENST00000477347 C14orf37Q86TY3 774 aa13.54□□□□□ -0.24
RPSAP55-201ENST00000477347 NUTM2FA1L443 756 aa13.53□□□□□ -0.24
RPSAP55-201ENST00000477347 CDK19Q9BWU1 502 aa13.53□□□□□ -0.24
RPSAP55-201ENST00000477347 ADGRB2O60241 1585 aa13.52□□□□□ -0.25
RPSAP55-201ENST00000477347 SIRT1Q96EB6 747 aa13.51□□□□□ -0.25
RPSAP55-201ENST00000477347 WASLO00401 505 aaPredicted RBP13.5□□□□□ -0.25
RPSAP55-201ENST00000477347 SLC24A1O60721 1099 aa13.5□□□□□ -0.25
RPSAP55-201ENST00000477347 PROSER2Q86WR7 435 aaPredicted RBP13.5□□□□□ -0.25
RPSAP55-201ENST00000477347 NKTRP30414 1462 aaKnown RBP13.49□□□□□ -0.25
RPSAP55-201ENST00000477347 ZNF335Q9H4Z2 1342 aaPredicted RBP13.49□□□□□ -0.25
RPSAP55-201ENST00000477347 PANK3Q9H999 370 aa13.49□□□□□ -0.25
RPSAP55-201ENST00000477347 FMN2Q9NZ56 1722 aa13.48□□□□□ -0.25
RPSAP55-201ENST00000477347 MIER1Q8N108 512 aa13.48□□□□□ -0.25
RPSAP55-201ENST00000477347 ATAD2Q6PL18 1390 aa13.47□□□□□ -0.25
RPSAP55-201ENST00000477347 SLC12A5Q9H2X9 1139 aa13.47□□□□□ -0.25
RPSAP55-201ENST00000477347 RGPD8O14715 1765 aaPredicted RBP13.47□□□□□ -0.25
RPSAP55-201ENST00000477347 ADGRL3Q9HAR2 1447 aa13.47□□□□□ -0.25
RPSAP55-201ENST00000477347 ANP32CO43423 234 aa13.46□□□□□ -0.25
RPSAP55-201ENST00000477347 ITSN1Q15811 1721 aa13.46□□□□□ -0.25
RPSAP55-201ENST00000477347 ATP7BP35670 1465 aa13.46□□□□□ -0.25
RPSAP55-201ENST00000477347 PPIP5K1Q6PFW1 1433 aa13.46□□□□□ -0.26
RPSAP55-201ENST00000477347 USP32Q8NFA0 1604 aa13.46□□□□□ -0.26
RPSAP55-201ENST00000477347 CDC42BPGQ6DT37 1551 aa13.45□□□□□ -0.26
RPSAP55-201ENST00000477347 PRR36Q9H6K5 1346 aa13.45□□□□□ -0.26
RPSAP55-201ENST00000477347 TOPAZ1Q8N9V7 1692 aa13.45□□□□□ -0.26
RPSAP55-201ENST00000477347 NUDT16Q96DE0 195 aaKnown RBP13.45□□□□□ -0.26
RPSAP55-201ENST00000477347 TMEM94Q12767 1356 aa13.45□□□□□ -0.26
RPSAP55-201ENST00000477347 NSD3Q9BZ95 1437 aa13.44□□□□□ -0.26
RPSAP55-201ENST00000477347 XIRP1Q702N8 1843 aaKnown RBP13.43□□□□□ -0.26
RPSAP55-201ENST00000477347 CABP1Q9NZU7 370 aa13.43□□□□□ -0.26
RPSAP55-201ENST00000477347 DMRT2Q9Y5R5 561 aa13.43□□□□□ -0.26
RPSAP55-201ENST00000477347 CC2D1BQ5T0F9 858 aaKnown RBP13.42□□□□□ -0.26
RPSAP55-201ENST00000477347 KNSTRNQ9Y448 316 aa13.42□□□□□ -0.26
RPSAP55-201ENST00000477347 A0A1W2PP64 1363 aa13.42□□□□□ -0.26
RPSAP55-201ENST00000477347 LRRC7Q96NW7 1537 aa13.41□□□□□ -0.26
RPSAP55-201ENST00000477347 HDGFL2Q7Z4V5 671 aaPredicted RBP13.41□□□□□ -0.26
RPSAP55-201ENST00000477347 ANKRD36BQ8N2N9 1353 aa13.41□□□□□ -0.26
RPSAP55-201ENST00000477347 AKAP12Q02952 1782 aa13.4□□□□□ -0.26
RPSAP55-201ENST00000477347 PMFBP1Q8TBY8 1022 aa13.4□□□□□ -0.26
RPSAP55-201ENST00000477347 PUS7Q96PZ0 661 aaKnown RBP13.4□□□□□ -0.26
RPSAP55-201ENST00000477347 NINLQ9Y2I6 1382 aa13.4□□□□□ -0.26
RPSAP55-201ENST00000477347 KIF20BQ96Q89 1820 aa13.39□□□□□ -0.27
RPSAP55-201ENST00000477347 CARD14Q9BXL6 1004 aa13.39□□□□□ -0.27
RPSAP55-201ENST00000477347 TERF2IPQ9NYB0 399 aa13.39□□□□□ -0.27
RPSAP55-201ENST00000477347 KTN1Q86UP2 1357 aaKnown RBP13.39□□□□□ -0.27
RPSAP55-201ENST00000477347 CD163L1Q9NR16 1453 aa13.39□□□□□ -0.27
RPSAP55-201ENST00000477347 MON2Q7Z3U7 1717 aa13.39□□□□□ -0.27
RPSAP55-201ENST00000477347 ANKARQ7Z5J8 1434 aa13.39□□□□□ -0.27
RPSAP55-201ENST00000477347 MSH6P52701 1360 aa13.38□□□□□ -0.27
RPSAP55-201ENST00000477347 CCDC61Q9Y6R9 512 aa13.38□□□□□ -0.27
RPSAP55-201ENST00000477347 ATF3P18847 181 aa13.37□□□□□ -0.27
RPSAP55-201ENST00000477347 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.37□□□□□ -0.27
RPSAP55-201ENST00000477347 PER1O15534 1290 aaPredicted RBP13.36□□□□□ -0.27
RPSAP55-201ENST00000477347 ESCO1Q5FWF5 840 aa13.36□□□□□ -0.27
RPSAP55-201ENST00000477347 NGDNQ8NEJ9 315 aaKnown RBP13.36□□□□□ -0.27
RPSAP55-201ENST00000477347 PRKRIP1Q9H875 184 aaPredicted RBP13.36□□□□□ -0.27
RPSAP55-201ENST00000477347 ACEP12821 1306 aa13.36□□□□□ -0.27
RPSAP55-201ENST00000477347 C19orf44Q9H6X5 657 aa13.35□□□□□ -0.27
RPSAP55-201ENST00000477347 NRKQ7Z2Y5 1582 aa13.34□□□□□ -0.27
RPSAP55-201ENST00000477347 ANKRD26Q9UPS8 1709 aa13.33□□□□□ -0.27
RPSAP55-201ENST00000477347 MST1RQ04912 1400 aa13.33□□□□□ -0.28
RPSAP55-201ENST00000477347 LTBP4Q8N2S1 1624 aa13.33□□□□□ -0.28
RPSAP55-201ENST00000477347 AMER1Q5JTC6 1135 aaPredicted RBP13.33□□□□□ -0.28
RPSAP55-201ENST00000477347 ORAI2Q96SN7 254 aa13.33□□□□□ -0.28
RPSAP55-201ENST00000477347 PHF8Q9UPP1 1060 aa13.33□□□□□ -0.28
RPSAP55-201ENST00000477347 C1orf167Q5SNV9 1468 aa13.33□□□□□ -0.28
RPSAP55-201ENST00000477347 CGNL1Q0VF96 1302 aa13.33□□□□□ -0.28
RPSAP55-201ENST00000477347 DCCP43146 1447 aa13.32□□□□□ -0.28
RPSAP55-201ENST00000477347 CPSF1Q10570 1443 aaKnown RBP13.32□□□□□ -0.28
RPSAP55-201ENST00000477347 NCOA3Q9Y6Q9 1424 aa13.32□□□□□ -0.28
RPSAP55-201ENST00000477347 KIF1AQ12756 1690 aa13.32□□□□□ -0.28
RPSAP55-201ENST00000477347 TNNT2P45379 298 aaPredicted RBP13.32□□□□□ -0.28
RPSAP55-201ENST00000477347 GGNBP2Q9H3C7 697 aa13.32□□□□□ -0.28
RPSAP55-201ENST00000477347 PARD3Q8TEW0 1356 aa13.32□□□□□ -0.28
RPSAP55-201ENST00000477347 USP6P35125 1406 aa13.31□□□□□ -0.28
RPSAP55-201ENST00000477347 EDC4Q6P2E9 1401 aaKnown RBP13.31□□□□□ -0.28
RPSAP55-201ENST00000477347 PLEKHG3A1L390 1219 aa13.31□□□□□ -0.28
RPSAP55-201ENST00000477347 XPCQ01831 940 aaPredicted RBP13.31□□□□□ -0.28
RPSAP55-201ENST00000477347 CADPS2Q86UW7 1296 aa13.31□□□□□ -0.28
RPSAP55-201ENST00000477347 MORC1Q86VD1 984 aa13.31□□□□□ -0.28
RPSAP55-201ENST00000477347 NME9Q86XW9 330 aa13.31□□□□□ -0.28
RPSAP55-201ENST00000477347 PLEKHG5O94827 1062 aa13.3□□□□□ -0.28
RPSAP55-201ENST00000477347 RALBP1Q15311 655 aa13.3□□□□□ -0.28
RPSAP55-201ENST00000477347 ZRANB1Q9UGI0 708 aa13.3□□□□□ -0.28
RPSAP55-201ENST00000477347 MYBBP1AQ9BQG0 1328 aaKnown RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms